RNA–Protein interactions for RNA: ENST00000489230.1

COL4A5-206, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 5

Gene COL4A5, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-206ENST00000489230 SHANK1Q9Y566 2161 aa11.25□□□□□ -0.61
COL4A5-206ENST00000489230 POLEQ07864 2286 aa11.25□□□□□ -0.61
COL4A5-206ENST00000489230 CENPVL1A0A0U1RR11 272 aa11.24□□□□□ -0.61
COL4A5-206ENST00000489230 CCT8L1PA6NM43 557 aa11.24□□□□□ -0.61
COL4A5-206ENST00000489230 CLDN24A6NM45 220 aa11.24□□□□□ -0.61
COL4A5-206ENST00000489230 B4DXG7 233 aa11.24□□□□□ -0.61
COL4A5-206ENST00000489230 SYT5O00445 386 aa11.24□□□□□ -0.61
COL4A5-206ENST00000489230 OIP5O43482 229 aa11.24□□□□□ -0.61
COL4A5-206ENST00000489230 EPPINO95925 133 aa11.24□□□□□ -0.61
COL4A5-206ENST00000489230 ZNF708P17019 499 aa11.24□□□□□ -0.61
COL4A5-206ENST00000489230 PRKCAP17252 672 aa11.24□□□□□ -0.61
COL4A5-206ENST00000489230 COL8A1P27658 744 aa11.24□□□□□ -0.61
COL4A5-206ENST00000489230 AQP1P29972 269 aa11.24□□□□□ -0.61
COL4A5-206ENST00000489230 KDELR2P33947 212 aa11.24□□□□□ -0.61
COL4A5-206ENST00000489230 IDH2P48735 452 aaKnown RBP11.24□□□□□ -0.61
COL4A5-206ENST00000489230 LHX2P50458 406 aa11.24□□□□□ -0.61
COL4A5-206ENST00000489230 SMSP52788 366 aa11.24□□□□□ -0.61
COL4A5-206ENST00000489230 DLX5P56178 289 aa11.24□□□□□ -0.61
COL4A5-206ENST00000489230 SESN3P58005 492 aa11.24□□□□□ -0.61
COL4A5-206ENST00000489230 EPS8Q12929 822 aa11.24□□□□□ -0.61
COL4A5-206ENST00000489230 EEF1A1P5Q5VTE0 462 aa11.24□□□□□ -0.61
COL4A5-206ENST00000489230 C1QL3Q5VWW1 255 aa11.24□□□□□ -0.61
COL4A5-206ENST00000489230 WBP2NLQ6ICG8 309 aa11.24□□□□□ -0.61
COL4A5-206ENST00000489230 B3GNT6Q6ZMB0 384 aa11.24□□□□□ -0.61
COL4A5-206ENST00000489230 GRINAQ7Z429 371 aa11.24□□□□□ -0.61
COL4A5-206ENST00000489230 CD163Q86VB7 1156 aa11.24□□□□□ -0.61
COL4A5-206ENST00000489230 ULK2Q8IYT8 1036 aa11.24□□□□□ -0.61
COL4A5-206ENST00000489230 LILRA2Q8N149 483 aa11.24□□□□□ -0.61
COL4A5-206ENST00000489230 CLIP4Q8N3C7 705 aa11.24□□□□□ -0.61
COL4A5-206ENST00000489230 OR5M9Q8NGP3 310 aa11.24□□□□□ -0.61
COL4A5-206ENST00000489230 FBXO27Q8NI29 283 aa11.24□□□□□ -0.61
COL4A5-206ENST00000489230 PHF10Q8WUB8 498 aaKnown RBP11.24□□□□□ -0.61
COL4A5-206ENST00000489230 LZICQ8WZA0 190 aa11.24□□□□□ -0.61
COL4A5-206ENST00000489230 UCN2Q96RP3 112 aa11.24□□□□□ -0.61
COL4A5-206ENST00000489230 CDRT15Q96T59 188 aa11.24□□□□□ -0.61
COL4A5-206ENST00000489230 KCTD14Q9BQ13 255 aaPredicted RBP11.24□□□□□ -0.61
COL4A5-206ENST00000489230 TRIM2Q9C040 744 aa11.24□□□□□ -0.61
COL4A5-206ENST00000489230 C1orf21Q9H246 121 aa11.24□□□□□ -0.61
COL4A5-206ENST00000489230 RLIMQ9NVW2 624 aa11.24□□□□□ -0.61
COL4A5-206ENST00000489230 HRH3Q9Y5N1 445 aa11.24□□□□□ -0.61
COL4A5-206ENST00000489230 SVILO95425 2214 aa11.24□□□□□ -0.61
COL4A5-206ENST00000489230 C17orf51A8MQB3 221 aa11.23□□□□□ -0.61
COL4A5-206ENST00000489230 H0Y3Z8 333 aa11.23□□□□□ -0.61
COL4A5-206ENST00000489230 ATP5HO75947 161 aa11.23□□□□□ -0.61
COL4A5-206ENST00000489230 NTN1O95631 604 aa11.23□□□□□ -0.61
COL4A5-206ENST00000489230 LGI1O95970 557 aa11.23□□□□□ -0.61
COL4A5-206ENST00000489230 PSMA4P25789 261 aaKnown RBP11.23□□□□□ -0.61
COL4A5-206ENST00000489230 CPA2P48052 419 aa11.23□□□□□ -0.61
COL4A5-206ENST00000489230 KCNJ5P48544 419 aa11.23□□□□□ -0.61
COL4A5-206ENST00000489230 STARP49675 285 aa11.23□□□□□ -0.61
COL4A5-206ENST00000489230 RASSF2P50749 326 aa11.23□□□□□ -0.61
COL4A5-206ENST00000489230 RNF144AP50876 292 aaPredicted RBP11.23□□□□□ -0.61
COL4A5-206ENST00000489230 POLR2HP52434 150 aaKnown RBP11.23□□□□□ -0.61
COL4A5-206ENST00000489230 CLDN18P56856 261 aa11.23□□□□□ -0.61
COL4A5-206ENST00000489230 SRYQ05066 204 aa11.23□□□□□ -0.61
COL4A5-206ENST00000489230 MERTKQ12866 999 aa11.23□□□□□ -0.61
COL4A5-206ENST00000489230 NDUFAF6Q330K2 333 aa11.23□□□□□ -0.61
COL4A5-206ENST00000489230 EMC4Q5J8M3 183 aa11.23□□□□□ -0.61
COL4A5-206ENST00000489230 C1orf185Q5T7R7 199 aa11.23□□□□□ -0.61
COL4A5-206ENST00000489230 RPTNQ6XPR3 784 aa11.23□□□□□ -0.61
COL4A5-206ENST00000489230 ESPNLQ6ZVH7 1005 aa11.23□□□□□ -0.61
COL4A5-206ENST00000489230 HMGN2P46Q86SG4 172 aa11.23□□□□□ -0.61
COL4A5-206ENST00000489230 FJX1Q86VR8 437 aa11.23□□□□□ -0.61
COL4A5-206ENST00000489230 SLC25A43Q8WUT9 341 aaPredicted RBP11.23□□□□□ -0.61
COL4A5-206ENST00000489230 PROX1Q92786 737 aa11.23□□□□□ -0.61
COL4A5-206ENST00000489230 RNF145Q96MT1 663 aa11.23□□□□□ -0.61
COL4A5-206ENST00000489230 ZNF559Q9BR84 538 aa11.23□□□□□ -0.61
COL4A5-206ENST00000489230 ADAM19Q9H013 955 aa11.23□□□□□ -0.61
COL4A5-206ENST00000489230 TMEM27Q9HBJ8 222 aa11.23□□□□□ -0.61
COL4A5-206ENST00000489230 ADPRHL2Q9NX46 363 aa11.23□□□□□ -0.61
COL4A5-206ENST00000489230 SELENONQ9NZV5 590 aa11.23□□□□□ -0.61
COL4A5-206ENST00000489230 RPS6KB2Q9UBS0 482 aa11.23□□□□□ -0.61
COL4A5-206ENST00000489230 ERRFI1Q9UJM3 462 aaPredicted RBP11.23□□□□□ -0.61
COL4A5-206ENST00000489230 TINAGQ9UJW2 476 aa11.23□□□□□ -0.61
COL4A5-206ENST00000489230 CD8B2A6NJW9 211 aa11.22□□□□□ -0.61
COL4A5-206ENST00000489230 H3BML4 177 aa11.22□□□□□ -0.61
COL4A5-206ENST00000489230 NME4O00746 187 aa11.22□□□□□ -0.61
COL4A5-206ENST00000489230 ADAMDEC1O15204 470 aa11.22□□□□□ -0.61
COL4A5-206ENST00000489230 FMO6PO60774 539 aa11.22□□□□□ -0.61
COL4A5-206ENST00000489230 GCM2O75603 506 aaPredicted RBP11.22□□□□□ -0.61
COL4A5-206ENST00000489230 HSD17B1P14061 328 aa11.22□□□□□ -0.61
COL4A5-206ENST00000489230 AGAP20933 346 aa11.22□□□□□ -0.61
COL4A5-206ENST00000489230 TCEA1P23193 301 aaKnown RBP11.22□□□□□ -0.61
COL4A5-206ENST00000489230 CXCR1P25024 350 aa11.22□□□□□ -0.61
COL4A5-206ENST00000489230 HTR1EP28566 365 aa11.22□□□□□ -0.61
COL4A5-206ENST00000489230 ACAA2P42765 397 aaKnown RBP11.22□□□□□ -0.61
COL4A5-206ENST00000489230 GSK3BP49841 420 aa11.22□□□□□ -0.61
COL4A5-206ENST00000489230 CARD18P57730 90 aa11.22□□□□□ -0.61
COL4A5-206ENST00000489230 SELENOWP63302 87 aa11.22□□□□□ -0.61
COL4A5-206ENST00000489230 SLC25A3Q00325 362 aa11.22□□□□□ -0.61
COL4A5-206ENST00000489230 DMTNQ08495 405 aa11.22□□□□□ -0.61
COL4A5-206ENST00000489230 SELENBP1Q13228 472 aa11.22□□□□□ -0.61
COL4A5-206ENST00000489230 TOMM34Q15785 309 aaPredicted RBP11.22□□□□□ -0.61
COL4A5-206ENST00000489230 SGCBQ16585 318 aa11.22□□□□□ -0.61
COL4A5-206ENST00000489230 NSUN5P2Q63ZY6 315 aa11.22□□□□□ -0.61
COL4A5-206ENST00000489230 GTF2IRD2BQ6EKJ0 949 aa11.22□□□□□ -0.61
COL4A5-206ENST00000489230 XKRXQ6PP77 449 aa11.22□□□□□ -0.61
COL4A5-206ENST00000489230 PLEKHM3Q6ZWE6 761 aa11.22□□□□□ -0.61
COL4A5-206ENST00000489230 GTF2IRD2Q86UP8 949 aa11.22□□□□□ -0.61
COL4A5-206ENST00000489230 RANBP3LQ86VV4 465 aaPredicted RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms