RNA–Protein interactions for RNA: ENST00000489111.1

USP11-211, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 516 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-211ENST00000489111 GSSP48637 474 aa9.14□□□□□ -0.95
USP11-211ENST00000489111 ZNF41P51814 821 aaPredicted RBP9.14□□□□□ -0.95
USP11-211ENST00000489111 CHN2P52757 468 aa9.14□□□□□ -0.95
USP11-211ENST00000489111 NUP107P57740 925 aa9.14□□□□□ -0.95
USP11-211ENST00000489111 OC90Q02509 493 aaPredicted RBP9.14□□□□□ -0.95
USP11-211ENST00000489111 TSPAN31Q12999 210 aa9.14□□□□□ -0.95
USP11-211ENST00000489111 QPRTQ15274 297 aa9.14□□□□□ -0.95
USP11-211ENST00000489111 PRAMEF20Q5VT98 475 aa9.14□□□□□ -0.95
USP11-211ENST00000489111 B3GNTL1Q67FW5 361 aaPredicted RBP9.14□□□□□ -0.95
USP11-211ENST00000489111 H3F3CQ6NXT2 135 aa9.14□□□□□ -0.95
USP11-211ENST00000489111 SLC30A6Q6NXT4 461 aa9.14□□□□□ -0.95
USP11-211ENST00000489111 C1orf94Q6P1W5 598 aa9.14□□□□□ -0.95
USP11-211ENST00000489111 CD300LDQ6UXZ3 194 aa9.14□□□□□ -0.95
USP11-211ENST00000489111 WDR88Q6ZMY6 472 aa9.14□□□□□ -0.95
USP11-211ENST00000489111 USP51Q70EK9 711 aa9.14□□□□□ -0.95
USP11-211ENST00000489111 ZER1Q7Z7L7 766 aa9.14□□□□□ -0.95
USP11-211ENST00000489111 CYP4Z2PQ8N1L4 340 aa9.14□□□□□ -0.95
USP11-211ENST00000489111 BEST3Q8N1M1 668 aa9.14□□□□□ -0.95
USP11-211ENST00000489111 OR4K17Q8NGC6 315 aa9.14□□□□□ -0.95
USP11-211ENST00000489111 PFN4Q8NHR9 129 aa9.14□□□□□ -0.95
USP11-211ENST00000489111 TEX47Q8TBZ9 253 aa9.14□□□□□ -0.95
USP11-211ENST00000489111 RNF138Q8WVD3 245 aa9.14□□□□□ -0.95
USP11-211ENST00000489111 TMEM234Q8WY98 164 aa9.14□□□□□ -0.95
USP11-211ENST00000489111 SGCZQ96LD1 299 aa9.14□□□□□ -0.95
USP11-211ENST00000489111 MUS81Q96NY9 551 aa9.14□□□□□ -0.95
USP11-211ENST00000489111 GRIP2Q9C0E4 1043 aa9.14□□□□□ -0.95
USP11-211ENST00000489111 IMPAD1Q9NX62 359 aa9.14□□□□□ -0.95
USP11-211ENST00000489111 TAS2R10Q9NYW0 307 aa9.14□□□□□ -0.95
USP11-211ENST00000489111 A0A087WUJ7 227 aa9.13□□□□□ -0.95
USP11-211ENST00000489111 C2orf72A6NCS6 295 aa9.13□□□□□ -0.95
USP11-211ENST00000489111 UNC119BA6NIH7 251 aa9.13□□□□□ -0.95
USP11-211ENST00000489111 ARGFXA6NJG6 315 aa9.13□□□□□ -0.95
USP11-211ENST00000489111 C17orf51A8MQB3 221 aa9.13□□□□□ -0.95
USP11-211ENST00000489111 ZNF891A8MT65 544 aaPredicted RBP9.13□□□□□ -0.95
USP11-211ENST00000489111 EFCAB9A8MZ26 197 aa9.13□□□□□ -0.95
USP11-211ENST00000489111 TNFAIP8O95379 198 aa9.13□□□□□ -0.95
USP11-211ENST00000489111 P04436 131 aa9.13□□□□□ -0.95
USP11-211ENST00000489111 CCL3P10147 92 aa9.13□□□□□ -0.95
USP11-211ENST00000489111 SAGP10523 405 aaPredicted RBP9.13□□□□□ -0.95
USP11-211ENST00000489111 CHMP24386 653 aa9.13□□□□□ -0.95
USP11-211ENST00000489111 CXCR1P25024 350 aa9.13□□□□□ -0.95
USP11-211ENST00000489111 TACR3P29371 465 aa9.13□□□□□ -0.95
USP11-211ENST00000489111 GGT2P36268 569 aa9.13□□□□□ -0.95
USP11-211ENST00000489111 POLR2IP36954 125 aaKnown RBP9.13□□□□□ -0.95
USP11-211ENST00000489111 HTR3AP46098 478 aa9.13□□□□□ -0.95
USP11-211ENST00000489111 OMPP47874 163 aa9.13□□□□□ -0.95
USP11-211ENST00000489111 MASP1P48740 699 aa9.13□□□□□ -0.95
USP11-211ENST00000489111 CYB561P49447 251 aa9.13□□□□□ -0.95
USP11-211ENST00000489111 ST13P50502 369 aaKnown RBP9.13□□□□□ -0.95
USP11-211ENST00000489111 HLCSP50747 726 aa9.13□□□□□ -0.95
USP11-211ENST00000489111 POLR2HP52434 150 aaKnown RBP9.13□□□□□ -0.95
USP11-211ENST00000489111 CRISP1P54107 249 aa9.13□□□□□ -0.95
USP11-211ENST00000489111 GAS1P54826 345 aa9.13□□□□□ -0.95
USP11-211ENST00000489111 CDC42P60953 191 aa9.13□□□□□ -0.95
USP11-211ENST00000489111 LSM11P83369 360 aaKnown RBP eCLIP9.13□□□□□ -0.95
USP11-211ENST00000489111 IL5RAQ01344 420 aa9.13□□□□□ -0.95
USP11-211ENST00000489111 PRKCDQ05655 676 aa9.13□□□□□ -0.95
USP11-211ENST00000489111 CLN3Q13286 438 aa9.13□□□□□ -0.95
USP11-211ENST00000489111 ATP1A1-AS1Q5TC04 95 aa9.13□□□□□ -0.95
USP11-211ENST00000489111 ZNF691Q5VV52 312 aa9.13□□□□□ -0.95
USP11-211ENST00000489111 SLC22A10Q63ZE4 541 aa9.13□□□□□ -0.95
USP11-211ENST00000489111 OR5M10Q6IEU7 315 aa9.13□□□□□ -0.95
USP11-211ENST00000489111 TMEM81Q6P7N7 255 aa9.13□□□□□ -0.95
USP11-211ENST00000489111 PRICKLE2Q7Z3G6 844 aa9.13□□□□□ -0.95
USP11-211ENST00000489111 THAP5Q7Z6K1 395 aa9.13□□□□□ -0.95
USP11-211ENST00000489111 ATG4DQ86TL0 474 aaPredicted RBP9.13□□□□□ -0.95
USP11-211ENST00000489111 MEX3DQ86XN8 651 aaKnown RBP9.13□□□□□ -0.95
USP11-211ENST00000489111 DEPDC4Q8N2C3 294 aa9.13□□□□□ -0.95
USP11-211ENST00000489111 ZNF786Q8N393 782 aa9.13□□□□□ -0.95
USP11-211ENST00000489111 FAM81AQ8TBF8 368 aa9.13□□□□□ -0.95
USP11-211ENST00000489111 FANK1Q8TC84 345 aa9.13□□□□□ -0.95
USP11-211ENST00000489111 GPR119Q8TDV5 335 aa9.13□□□□□ -0.95
USP11-211ENST00000489111 PAQR8Q8TEZ7 354 aa9.13□□□□□ -0.95
USP11-211ENST00000489111 KCNE4Q8WWG9 221 aa9.13□□□□□ -0.95
USP11-211ENST00000489111 ST8SIA1Q92185 356 aa9.13□□□□□ -0.95
USP11-211ENST00000489111 BPIFA2Q96DR5 249 aa9.13□□□□□ -0.95
USP11-211ENST00000489111 PITX2Q99697 317 aa9.13□□□□□ -0.95
USP11-211ENST00000489111 ZNF426Q9BUY5 554 aa9.13□□□□□ -0.95
USP11-211ENST00000489111 TEX12Q9BXU0 123 aa9.13□□□□□ -0.95
USP11-211ENST00000489111 SLC19A3Q9BZV2 496 aa9.13□□□□□ -0.95
USP11-211ENST00000489111 PTGES2Q9H7Z7 377 aa9.13□□□□□ -0.95
USP11-211ENST00000489111 C12orf10Q9HB07 376 aa9.13□□□□□ -0.95
USP11-211ENST00000489111 CPNE5Q9HCH3 593 aa9.13□□□□□ -0.95
USP11-211ENST00000489111 TBC1D23Q9NUY8 699 aa9.13□□□□□ -0.95
USP11-211ENST00000489111 UBAP1Q9NZ09 502 aa9.13□□□□□ -0.95
USP11-211ENST00000489111 MED11Q9P086 117 aa9.13□□□□□ -0.95
USP11-211ENST00000489111 NDRG4Q9ULP0 352 aaKnown RBP9.13□□□□□ -0.95
USP11-211ENST00000489111 PCDHGB6Q9Y5F9 930 aa9.13□□□□□ -0.95
USP11-211ENST00000489111 SPEGQ15772 3267 aa9.13□□□□□ -0.95
USP11-211ENST00000489111 SCN2AQ99250 2005 aa9.12□□□□□ -0.95
USP11-211ENST00000489111 SEC16AO15027 2179 aa9.12□□□□□ -0.95
USP11-211ENST00000489111 IGLV3-32A0A0A0MS00 114 aa9.12□□□□□ -0.95
USP11-211ENST00000489111 HTR3EA5X5Y0 456 aa9.12□□□□□ -0.95
USP11-211ENST00000489111 MAGEA13PA6NCF6 341 aa9.12□□□□□ -0.95
USP11-211ENST00000489111 ENO4A6NNW6 628 aa9.12□□□□□ -0.95
USP11-211ENST00000489111 SLC25A12O75746 678 aa9.12□□□□□ -0.95
USP11-211ENST00000489111 MST1P26927 711 aa9.12□□□□□ -0.95
USP11-211ENST00000489111 EPHA2P29317 976 aa9.12□□□□□ -0.95
USP11-211ENST00000489111 PTGDSP41222 190 aa9.12□□□□□ -0.95
USP11-211ENST00000489111 CTBP2P56545 445 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms