RNA–Protein interactions for RNA: ENST00000489032.5

TRAPPC12-221, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-221ENST00000489032 SCAMP2O15127 329 aaKnown RBP7.37□□□□□ -1.23
TRAPPC12-221ENST00000489032 UBDO15205 165 aa7.37□□□□□ -1.23
TRAPPC12-221ENST00000489032 TBX19O60806 448 aa7.37□□□□□ -1.23
TRAPPC12-221ENST00000489032 PRAMEF2O60811 474 aa7.37□□□□□ -1.23
TRAPPC12-221ENST00000489032 G6PDP11413 515 aa7.37□□□□□ -1.23
TRAPPC12-221ENST00000489032 IDO1P14902 403 aa7.37□□□□□ -1.23
TRAPPC12-221ENST00000489032 CLDN8P56748 225 aa7.37□□□□□ -1.23
TRAPPC12-221ENST00000489032 STX1BP61266 288 aa7.37□□□□□ -1.23
TRAPPC12-221ENST00000489032 NCALDP61601 193 aa7.37□□□□□ -1.23
TRAPPC12-221ENST00000489032 OC90Q02509 493 aaPredicted RBP7.37□□□□□ -1.23
TRAPPC12-221ENST00000489032 PTGR1Q14914 329 aa7.37□□□□□ -1.23
TRAPPC12-221ENST00000489032 GSTA3Q16772 222 aa7.37□□□□□ -1.23
TRAPPC12-221ENST00000489032 PRICKLE4Q2TBC4 344 aa7.37□□□□□ -1.23
TRAPPC12-221ENST00000489032 ACER2Q5QJU3 275 aa7.37□□□□□ -1.23
TRAPPC12-221ENST00000489032 H3F3CQ6NXT2 135 aa7.37□□□□□ -1.23
TRAPPC12-221ENST00000489032 EPGNQ6UW88 154 aa7.37□□□□□ -1.23
TRAPPC12-221ENST00000489032 SPNS3Q6ZMD2 512 aa7.37□□□□□ -1.23
TRAPPC12-221ENST00000489032 KIF2BQ8N4N8 673 aa7.37□□□□□ -1.23
TRAPPC12-221ENST00000489032 TMEM156Q8N614 296 aa7.37□□□□□ -1.23
TRAPPC12-221ENST00000489032 HORMAD2Q8N7B1 307 aa7.37□□□□□ -1.23
TRAPPC12-221ENST00000489032 APCDD1LQ8NCL9 501 aa7.37□□□□□ -1.23
TRAPPC12-221ENST00000489032 ZNF675Q8TD23 568 aa7.37□□□□□ -1.23
TRAPPC12-221ENST00000489032 MAELQ96JY0 434 aaKnown RBP7.37□□□□□ -1.23
TRAPPC12-221ENST00000489032 LURAP1Q96LR2 239 aa7.37□□□□□ -1.23
TRAPPC12-221ENST00000489032 ZNF681Q96N22 645 aa7.37□□□□□ -1.23
TRAPPC12-221ENST00000489032 PRR25Q96S07 402 aa7.37□□□□□ -1.23
TRAPPC12-221ENST00000489032 UTP23Q9BRU9 249 aaKnown RBP7.37□□□□□ -1.23
TRAPPC12-221ENST00000489032 LRMDAQ9H2I8 198 aa7.37□□□□□ -1.23
TRAPPC12-221ENST00000489032 WDR55Q9H6Y2 383 aaPredicted RBP7.37□□□□□ -1.23
TRAPPC12-221ENST00000489032 TCF7L2Q9NQB0 619 aa7.37□□□□□ -1.23
TRAPPC12-221ENST00000489032 MGAT4CQ9UBM8 478 aa7.37□□□□□ -1.23
TRAPPC12-221ENST00000489032 PRODH2Q9UF12 536 aa7.37□□□□□ -1.23
TRAPPC12-221ENST00000489032 ATP6V1HQ9UI12 483 aa7.37□□□□□ -1.23
TRAPPC12-221ENST00000489032 DNHD1Q96M86 4753 aa7.37□□□□□ -1.23
TRAPPC12-221ENST00000489032 NIPBLQ6KC79 2804 aaeCLIP7.37□□□□□ -1.232e-7■■□□□ 12.9
TRAPPC12-221ENST00000489032 C2orf92A0A1B0GVN3 265 aa7.36□□□□□ -1.23
TRAPPC12-221ENST00000489032 AQP12BA6NM10 295 aa7.36□□□□□ -1.23
TRAPPC12-221ENST00000489032 GABRR3A8MPY1 467 aa7.36□□□□□ -1.23
TRAPPC12-221ENST00000489032 IGKV3-11P04433 115 aa7.36□□□□□ -1.23
TRAPPC12-221ENST00000489032 NQO1P15559 274 aaKnown RBP7.36□□□□□ -1.23
TRAPPC12-221ENST00000489032 SSR4P51571 173 aa7.36□□□□□ -1.23
TRAPPC12-221ENST00000489032 GPR143P51810 404 aa7.36□□□□□ -1.23
TRAPPC12-221ENST00000489032 DGKQP52824 942 aa7.36□□□□□ -1.23
TRAPPC12-221ENST00000489032 DIO3P55073 304 aa7.36□□□□□ -1.23
TRAPPC12-221ENST00000489032 MLF1P58340 268 aa7.36□□□□□ -1.23
TRAPPC12-221ENST00000489032 C21orf58P58505 322 aa7.36□□□□□ -1.23
TRAPPC12-221ENST00000489032 IRX1P78414 480 aaPredicted RBP7.36□□□□□ -1.23
TRAPPC12-221ENST00000489032 FUT7Q11130 342 aa7.36□□□□□ -1.23
TRAPPC12-221ENST00000489032 KLF10Q13118 480 aa7.36□□□□□ -1.23
TRAPPC12-221ENST00000489032 PDE7AQ13946 482 aa7.36□□□□□ -1.23
TRAPPC12-221ENST00000489032 CEBPEQ15744 281 aa7.36□□□□□ -1.23
TRAPPC12-221ENST00000489032 SLC9B1Q4ZJI4 515 aa7.36□□□□□ -1.23
TRAPPC12-221ENST00000489032 PRR30Q53SZ7 412 aaPredicted RBP7.36□□□□□ -1.23
TRAPPC12-221ENST00000489032 ANXA8L1Q5VT79 327 aa7.36□□□□□ -1.23
TRAPPC12-221ENST00000489032 FCRLBQ6BAA4 426 aa7.36□□□□□ -1.23
TRAPPC12-221ENST00000489032 ANKRD26P1Q6NSI1 321 aa7.36□□□□□ -1.23
TRAPPC12-221ENST00000489032 FAM180BQ6P0A1 224 aa7.36□□□□□ -1.23
TRAPPC12-221ENST00000489032 IGFL2Q6UWQ7 119 aa7.36□□□□□ -1.23
TRAPPC12-221ENST00000489032 IGFL3Q6UXB1 125 aa7.36□□□□□ -1.23
TRAPPC12-221ENST00000489032 ASRGL1Q7L266 308 aa7.36□□□□□ -1.23
TRAPPC12-221ENST00000489032 TAGAPQ8N103 731 aa7.36□□□□□ -1.23
TRAPPC12-221ENST00000489032 ARHGAP24Q8N264 748 aa7.36□□□□□ -1.23
TRAPPC12-221ENST00000489032 OR9A2Q8NGT5 310 aa7.36□□□□□ -1.23
TRAPPC12-221ENST00000489032 NUBPLQ8TB37 319 aa7.36□□□□□ -1.23
TRAPPC12-221ENST00000489032 SLC22A8Q8TCC7 542 aa7.36□□□□□ -1.23
TRAPPC12-221ENST00000489032 DOK4Q8TEW6 326 aa7.36□□□□□ -1.23
TRAPPC12-221ENST00000489032 ZNF721Q8TF20 911 aa7.36□□□□□ -1.23
TRAPPC12-221ENST00000489032 PSMF1Q92530 271 aa7.36□□□□□ -1.23
TRAPPC12-221ENST00000489032 HAS2Q92819 552 aa7.36□□□□□ -1.23
TRAPPC12-221ENST00000489032 AMDHD1Q96NU7 426 aa7.36□□□□□ -1.23
TRAPPC12-221ENST00000489032 GAL3ST4Q96RP7 486 aa7.36□□□□□ -1.23
TRAPPC12-221ENST00000489032 CCDC28BQ9BUN5 200 aa7.36□□□□□ -1.23
TRAPPC12-221ENST00000489032 GLIPR2Q9H4G4 154 aa7.36□□□□□ -1.23
TRAPPC12-221ENST00000489032 C3orf14Q9HBI5 128 aa7.36□□□□□ -1.23
TRAPPC12-221ENST00000489032 ACSS1Q9NUB1 689 aaPredicted RBP7.36□□□□□ -1.23
TRAPPC12-221ENST00000489032 DDX18Q9NVP1 670 aaKnown RBP7.36□□□□□ -1.23
TRAPPC12-221ENST00000489032 AIG1Q9NVV5 245 aa7.36□□□□□ -1.23
TRAPPC12-221ENST00000489032 TAS2R9Q9NYW1 312 aa7.36□□□□□ -1.23
TRAPPC12-221ENST00000489032 MAT2BQ9NZL9 334 aa7.36□□□□□ -1.23
TRAPPC12-221ENST00000489032 PCDHGB4Q9UN71 923 aa7.36□□□□□ -1.23
TRAPPC12-221ENST00000489032 ERVK-11Q9UQG0 969 aa7.36□□□□□ -1.23
TRAPPC12-221ENST00000489032 YARS2Q9Y2Z4 477 aaKnown RBP7.36□□□□□ -1.23
TRAPPC12-221ENST00000489032 DTNAQ9Y4J8 743 aa7.36□□□□□ -1.23
TRAPPC12-221ENST00000489032 CROCCQ5TZA2 2017 aa7.35□□□□□ -1.23
TRAPPC12-221ENST00000489032 SPG11Q96JI7 2443 aa7.35□□□□□ -1.23
TRAPPC12-221ENST00000489032 TRAV17A0A0B4J275 112 aa7.35□□□□□ -1.23
TRAPPC12-221ENST00000489032 A0A1W2PRB8 838 aa7.35□□□□□ -1.23
TRAPPC12-221ENST00000489032 OR5H15A6NDH6 313 aa7.35□□□□□ -1.23
TRAPPC12-221ENST00000489032 A8MVJ9 347 aa7.35□□□□□ -1.23
TRAPPC12-221ENST00000489032 PRSS44E7EML9 344 aa7.35□□□□□ -1.23
TRAPPC12-221ENST00000489032 E9PBE3 544 aa7.35□□□□□ -1.23
TRAPPC12-221ENST00000489032 WWP2O00308 870 aa7.35□□□□□ -1.23
TRAPPC12-221ENST00000489032 ZNF195O14628 629 aa7.35□□□□□ -1.23
TRAPPC12-221ENST00000489032 SLC22A2O15244 555 aa7.35□□□□□ -1.23
TRAPPC12-221ENST00000489032 CFLARO15519 480 aa7.35□□□□□ -1.23
TRAPPC12-221ENST00000489032 PLOD3O60568 738 aa7.35□□□□□ -1.23
TRAPPC12-221ENST00000489032 SLC22A3O75751 556 aa7.35□□□□□ -1.23
TRAPPC12-221ENST00000489032 CBX6O95503 412 aa7.35□□□□□ -1.23
TRAPPC12-221ENST00000489032 WDPCPO95876 746 aa7.35□□□□□ -1.23
TRAPPC12-221ENST00000489032 IFI6P09912 130 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms