RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-231ENST00000488905 HBA1P69905 142 aa16.32■□□□□ 0.2
HDAC6-231ENST00000488905 SKP2Q13309 424 aa16.32■□□□□ 0.2
HDAC6-231ENST00000488905 RIMKLAQ8IXN7 391 aa16.32■□□□□ 0.2
HDAC6-231ENST00000488905 SDF2Q99470 211 aa16.32■□□□□ 0.2
HDAC6-231ENST00000488905 TRIM2Q9C040 744 aa16.32■□□□□ 0.2
HDAC6-231ENST00000488905 SERHL2Q9H4I8 314 aa16.32■□□□□ 0.2
HDAC6-231ENST00000488905 PRSS50Q9UI38 385 aa16.32■□□□□ 0.2
HDAC6-231ENST00000488905 LIPT1Q9Y234 373 aa16.32■□□□□ 0.2
HDAC6-231ENST00000488905 ALPK2Q86TB3 2170 aa16.31■□□□□ 0.2
HDAC6-231ENST00000488905 HEATR1Q9H583 2144 aaKnown RBP16.31■□□□□ 0.2
HDAC6-231ENST00000488905 TLDC2A0PJX2 215 aa16.31■□□□□ 0.2
HDAC6-231ENST00000488905 SERINC4A6NH21 518 aa16.31■□□□□ 0.2
HDAC6-231ENST00000488905 COX5AP20674 150 aa16.31■□□□□ 0.2
HDAC6-231ENST00000488905 EDNRAP25101 427 aa16.31■□□□□ 0.2
HDAC6-231ENST00000488905 IDUAP35475 653 aa16.31■□□□□ 0.2
HDAC6-231ENST00000488905 RASGEF1BQ0VAM2 473 aa16.31■□□□□ 0.2
HDAC6-231ENST00000488905 STK11Q15831 433 aa16.31■□□□□ 0.2
HDAC6-231ENST00000488905 PGGHGQ32M88 737 aa16.31■□□□□ 0.2
HDAC6-231ENST00000488905 TIGD2Q4W5G0 525 aa16.31■□□□□ 0.2
HDAC6-231ENST00000488905 BHLHB9Q6PI77 547 aa16.31■□□□□ 0.2
HDAC6-231ENST00000488905 DNAJC14Q6Y2X3 702 aaPredicted RBP16.31■□□□□ 0.2
HDAC6-231ENST00000488905 CXXC5Q7LFL8 322 aaKnown RBP16.31■□□□□ 0.2
HDAC6-231ENST00000488905 RIBC1Q8N443 379 aaPredicted RBP16.31■□□□□ 0.2
HDAC6-231ENST00000488905 OR2W6PQ8NHA6 318 aa16.31■□□□□ 0.2
HDAC6-231ENST00000488905 ST8SIA1Q92185 356 aa16.31■□□□□ 0.2
HDAC6-231ENST00000488905 ARL8AQ96BM9 186 aa16.31■□□□□ 0.2
HDAC6-231ENST00000488905 OR5B2Q96R09 309 aa16.31■□□□□ 0.2
HDAC6-231ENST00000488905 ZNF300Q96RE9 604 aaPredicted RBP16.31■□□□□ 0.2
HDAC6-231ENST00000488905 DUSP26Q9BV47 211 aa16.31■□□□□ 0.2
HDAC6-231ENST00000488905 SLCO5A1Q9H2Y9 848 aa16.31■□□□□ 0.2
HDAC6-231ENST00000488905 CENPVL1A0A0U1RR11 272 aa16.3■□□□□ 0.2
HDAC6-231ENST00000488905 DPRXA6NFQ7 191 aa16.3■□□□□ 0.2
HDAC6-231ENST00000488905 SPAG7O75391 227 aa16.3■□□□□ 0.2
HDAC6-231ENST00000488905 AK1P00568 194 aa16.3■□□□□ 0.2
HDAC6-231ENST00000488905 IGHV4-39P01824 125 aa16.3■□□□□ 0.2
HDAC6-231ENST00000488905 THBS1P07996 1170 aa16.3■□□□□ 0.2
HDAC6-231ENST00000488905 ACVR1BP36896 505 aa16.3■□□□□ 0.2
HDAC6-231ENST00000488905 C21orf58P58505 322 aa16.3■□□□□ 0.2
HDAC6-231ENST00000488905 FAPQ12884 760 aa16.3■□□□□ 0.2
HDAC6-231ENST00000488905 PPA1Q15181 289 aa16.3■□□□□ 0.2
HDAC6-231ENST00000488905 GPR68Q15743 365 aa16.3■□□□□ 0.2
HDAC6-231ENST00000488905 HEPHL1Q6MZM0 1159 aa16.3■□□□□ 0.2
HDAC6-231ENST00000488905 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.3■□□□□ 0.2
HDAC6-231ENST00000488905 TCP10LQ8TDR4 215 aa16.3■□□□□ 0.2
HDAC6-231ENST00000488905 TUBGCP3Q96CW5 907 aa16.3■□□□□ 0.2
HDAC6-231ENST00000488905 THUMPD3Q9BV44 507 aaKnown RBP16.3■□□□□ 0.2
HDAC6-231ENST00000488905 REG4Q9BYZ8 158 aa16.3■□□□□ 0.2
HDAC6-231ENST00000488905 LAT2Q9GZY6 243 aa16.3■□□□□ 0.2
HDAC6-231ENST00000488905 QRSL1Q9H0R6 528 aaKnown RBP16.3■□□□□ 0.2
HDAC6-231ENST00000488905 ALG2Q9H553 416 aa16.3■□□□□ 0.2
HDAC6-231ENST00000488905 ZDHHC2Q9UIJ5 367 aa16.3■□□□□ 0.2
HDAC6-231ENST00000488905 KCNE5Q9UJ90 142 aa16.3■□□□□ 0.2
HDAC6-231ENST00000488905 RNF103-CHMP3A0A140T963 221 aa16.29■□□□□ 0.2
HDAC6-231ENST00000488905 ZNF724A8MTY0 619 aa16.29■□□□□ 0.2
HDAC6-231ENST00000488905 DNAJA2O60884 412 aa16.29■□□□□ 0.2
HDAC6-231ENST00000488905 STX11O75558 287 aa16.29■□□□□ 0.2
HDAC6-231ENST00000488905 CYP7B1O75881 506 aa16.29■□□□□ 0.2
HDAC6-231ENST00000488905 FESP07332 822 aa16.29■□□□□ 0.2
HDAC6-231ENST00000488905 G6PDP11413 515 aa16.29■□□□□ 0.2
HDAC6-231ENST00000488905 MATN1P21941 496 aa16.29■□□□□ 0.2
HDAC6-231ENST00000488905 CDH11P55287 796 aa16.29■□□□□ 0.2
HDAC6-231ENST00000488905 ZNF141Q15928 474 aa16.29■□□□□ 0.2
HDAC6-231ENST00000488905 ABLIM2Q6H8Q1 611 aa16.29■□□□□ 0.2
HDAC6-231ENST00000488905 DTX2Q86UW9 622 aa16.29■□□□□ 0.2
HDAC6-231ENST00000488905 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.29■□□□□ 0.2
HDAC6-231ENST00000488905 ZNF75CPQ92670 426 aaPredicted RBP16.29■□□□□ 0.2
HDAC6-231ENST00000488905 SLC35G5Q96KT7 338 aa16.29■□□□□ 0.2
HDAC6-231ENST00000488905 TRAF4Q9BUZ4 470 aaPredicted RBP16.29■□□□□ 0.2
HDAC6-231ENST00000488905 ZNF350Q9GZX5 532 aa16.29■□□□□ 0.2
HDAC6-231ENST00000488905 NPAP1Q9NZP6 1156 aa16.29■□□□□ 0.2
HDAC6-231ENST00000488905 LGALS13Q9UHV8 139 aa16.29■□□□□ 0.2
HDAC6-231ENST00000488905 YLPM1P49750 1951 aaKnown RBP16.29■□□□□ 0.2
HDAC6-231ENST00000488905 DUXAA6NLW8 204 aa16.28■□□□□ 0.2
HDAC6-231ENST00000488905 SHISA9B4DS77 424 aa16.28■□□□□ 0.2
HDAC6-231ENST00000488905 C9JVG2 144 aa16.28■□□□□ 0.2
HDAC6-231ENST00000488905 RAMP1O60894 148 aa16.28■□□□□ 0.2
HDAC6-231ENST00000488905 UGT2B17O75795 530 aa16.28■□□□□ 0.2
HDAC6-231ENST00000488905 CSTAP01040 98 aa16.28■□□□□ 0.2
HDAC6-231ENST00000488905 UBTFL6P0CB48 400 aaPredicted RBP16.28■□□□□ 0.2
HDAC6-231ENST00000488905 IGHV1-2P23083 117 aa16.28■□□□□ 0.2
HDAC6-231ENST00000488905 DIO1P49895 249 aa16.28■□□□□ 0.2
HDAC6-231ENST00000488905 SESN3P58005 492 aa16.28■□□□□ 0.2
HDAC6-231ENST00000488905 CSNK2A1P68400 391 aaPredicted RBP16.28■□□□□ 0.2
HDAC6-231ENST00000488905 MERTKQ12866 999 aa16.28■□□□□ 0.2
HDAC6-231ENST00000488905 MAD2L1Q13257 205 aaPredicted RBP16.28■□□□□ 0.2
HDAC6-231ENST00000488905 PGS1Q32NB8 556 aa16.28■□□□□ 0.2
HDAC6-231ENST00000488905 SYT14P1Q58G82 188 aa16.28■□□□□ 0.2
HDAC6-231ENST00000488905 TIMM23BQ5SRD1 257 aa16.28■□□□□ 0.2
HDAC6-231ENST00000488905 DNM1P46Q6ZS02 220 aa16.28■□□□□ 0.2
HDAC6-231ENST00000488905 SSX8Q7RTT4 187 aa16.28■□□□□ 0.2
HDAC6-231ENST00000488905 OLIG3Q7RTU3 272 aa16.28■□□□□ 0.2
HDAC6-231ENST00000488905 C6orf120Q7Z4R8 191 aa16.28■□□□□ 0.2
HDAC6-231ENST00000488905 GALNT5Q7Z7M9 940 aa16.28■□□□□ 0.2
HDAC6-231ENST00000488905 CLECL1Q8IZS7 167 aa16.28■□□□□ 0.2
HDAC6-231ENST00000488905 CLEC4FQ8N1N0 589 aa16.28■□□□□ 0.2
HDAC6-231ENST00000488905 SLC25A43Q8WUT9 341 aaPredicted RBP16.28■□□□□ 0.2
HDAC6-231ENST00000488905 TMEM234Q8WY98 164 aa16.28■□□□□ 0.2
HDAC6-231ENST00000488905 ZNF775Q96BV0 537 aaPredicted RBP16.28■□□□□ 0.2
HDAC6-231ENST00000488905 MUCL1Q96DR8 90 aa16.28■□□□□ 0.2
HDAC6-231ENST00000488905 HS6ST2Q96MM7 605 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms