RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 DYDC1Q8WWB3 177 aa15.86■□□□□ 0.13
ITGB1-215ENST00000488494 ST8SIA1Q92185 356 aa15.86■□□□□ 0.13
ITGB1-215ENST00000488494 VPS33AQ96AX1 596 aa15.86■□□□□ 0.13
ITGB1-215ENST00000488494 ZG16BQ96DA0 208 aa15.86■□□□□ 0.13
ITGB1-215ENST00000488494 REXO5Q96IC2 774 aaKnown RBP15.86■□□□□ 0.13
ITGB1-215ENST00000488494 MED18Q9BUE0 208 aa15.86■□□□□ 0.13
ITGB1-215ENST00000488494 SLC38A1Q9H2H9 487 aa15.86■□□□□ 0.13
ITGB1-215ENST00000488494 GLRX2Q9NS18 164 aa15.86■□□□□ 0.13
ITGB1-215ENST00000488494 ELOVL5Q9NYP7 299 aa15.86■□□□□ 0.13
ITGB1-215ENST00000488494 LIPT1Q9Y234 373 aa15.86■□□□□ 0.13
ITGB1-215ENST00000488494 PLEKHA6Q9Y2H5 1048 aa15.86■□□□□ 0.13
ITGB1-215ENST00000488494 A0A1W2PNR3 127 aa15.85■□□□□ 0.13
ITGB1-215ENST00000488494 POLR3GO15318 223 aaPredicted RBP15.85■□□□□ 0.13
ITGB1-215ENST00000488494 GOSR1O95249 250 aa15.85■□□□□ 0.13
ITGB1-215ENST00000488494 ANP32DO95626 131 aa15.85■□□□□ 0.13
ITGB1-215ENST00000488494 KRT75O95678 551 aa15.85■□□□□ 0.13
ITGB1-215ENST00000488494 HRGP04196 525 aa15.85■□□□□ 0.13
ITGB1-215ENST00000488494 PCYT1AP49585 367 aa15.85■□□□□ 0.13
ITGB1-215ENST00000488494 POLR2JP52435 117 aaKnown RBP15.85■□□□□ 0.13
ITGB1-215ENST00000488494 ART1P52961 327 aa15.85■□□□□ 0.13
ITGB1-215ENST00000488494 SESN3P58005 492 aa15.85■□□□□ 0.13
ITGB1-215ENST00000488494 STX1BP61266 288 aa15.85■□□□□ 0.13
ITGB1-215ENST00000488494 GTDC1Q4AE62 458 aa15.85■□□□□ 0.13
ITGB1-215ENST00000488494 C6orf10Q5SRN2 563 aa15.85■□□□□ 0.13
ITGB1-215ENST00000488494 HDXQ7Z353 690 aa15.85■□□□□ 0.13
ITGB1-215ENST00000488494 ZNF550Q7Z398 422 aa15.85■□□□□ 0.13
ITGB1-215ENST00000488494 ITCHQ96J02 903 aa15.85■□□□□ 0.13
ITGB1-215ENST00000488494 WFIKKN1Q96NZ8 548 aa15.85■□□□□ 0.13
ITGB1-215ENST00000488494 C12orf49Q9H741 205 aa15.85■□□□□ 0.13
ITGB1-215ENST00000488494 RMND5AQ9H871 391 aa15.85■□□□□ 0.13
ITGB1-215ENST00000488494 TCF7L2Q9NQB0 619 aa15.85■□□□□ 0.13
ITGB1-215ENST00000488494 ARGLU1Q9NWB6 273 aaPredicted RBP15.85■□□□□ 0.13
ITGB1-215ENST00000488494 F8P00451 2351 aa15.84■□□□□ 0.13
ITGB1-215ENST00000488494 MAP1AP78559 2803 aaPredicted RBP15.84■□□□□ 0.13
ITGB1-215ENST00000488494 FAM234BA2RU67 622 aa15.84■□□□□ 0.13
ITGB1-215ENST00000488494 AGAP5A6NIR3 686 aa15.84■□□□□ 0.13
ITGB1-215ENST00000488494 HMGB1P1B2RPK0 211 aaPredicted RBP15.84■□□□□ 0.13
ITGB1-215ENST00000488494 C16orf97H3BN30 126 aa15.84■□□□□ 0.13
ITGB1-215ENST00000488494 CASKO14936 926 aa15.84■□□□□ 0.13
ITGB1-215ENST00000488494 PABPC4LP0CB38 370 aaKnown RBP15.84■□□□□ 0.13
ITGB1-215ENST00000488494 NR2F1P10589 423 aa15.84■□□□□ 0.13
ITGB1-215ENST00000488494 H2AFXP16104 143 aaPredicted RBP15.84■□□□□ 0.13
ITGB1-215ENST00000488494 RYKP34925 604 aa15.84■□□□□ 0.13
ITGB1-215ENST00000488494 IST1P53990 364 aa15.84■□□□□ 0.13
ITGB1-215ENST00000488494 KCNJ10P78508 379 aa15.84■□□□□ 0.13
ITGB1-215ENST00000488494 RNPS1Q15287 305 aaKnown RBP15.84■□□□□ 0.13
ITGB1-215ENST00000488494 PAMR1Q6UXH9 720 aa15.84■□□□□ 0.13
ITGB1-215ENST00000488494 LRRC74BQ6ZQY2 392 aa15.84■□□□□ 0.13
ITGB1-215ENST00000488494 PLEKHM3Q6ZWE6 761 aa15.84■□□□□ 0.13
ITGB1-215ENST00000488494 FCRLAQ7L513 359 aa15.84■□□□□ 0.13
ITGB1-215ENST00000488494 ARFGAP2Q8N6H7 521 aa15.84■□□□□ 0.13
ITGB1-215ENST00000488494 ZNF563Q8TA94 476 aa15.84■□□□□ 0.13
ITGB1-215ENST00000488494 TMEM234Q8WY98 164 aa15.84■□□□□ 0.13
ITGB1-215ENST00000488494 NINJ1Q92982 152 aa15.84■□□□□ 0.13
ITGB1-215ENST00000488494 AURKBQ96GD4 344 aaPredicted RBP15.84■□□□□ 0.13
ITGB1-215ENST00000488494 OR5B2Q96R09 309 aa15.84■□□□□ 0.13
ITGB1-215ENST00000488494 EBF4Q9BQW3 602 aa15.84■□□□□ 0.13
ITGB1-215ENST00000488494 KLHL4Q9C0H6 718 aa15.84■□□□□ 0.13
ITGB1-215ENST00000488494 EXOSC3Q9NQT5 275 aaKnown RBP15.84■□□□□ 0.13
ITGB1-215ENST00000488494 PLSCR4Q9NRQ2 329 aa15.84■□□□□ 0.13
ITGB1-215ENST00000488494 ST6GALNAC1Q9NSC7 600 aaPredicted RBP15.84■□□□□ 0.13
ITGB1-215ENST00000488494 CCM2LQ9NUG4 571 aaPredicted RBP15.84■□□□□ 0.13
ITGB1-215ENST00000488494 ACER3Q9NUN7 267 aa15.84■□□□□ 0.13
ITGB1-215ENST00000488494 C6orf203Q9P0P8 240 aaPredicted RBP15.84■□□□□ 0.13
ITGB1-215ENST00000488494 KLHL13Q9P2N7 655 aa15.84■□□□□ 0.13
ITGB1-215ENST00000488494 P2RX2Q9UBL9 471 aa15.84■□□□□ 0.13
ITGB1-215ENST00000488494 IGHV3-15A0A0B4J1V0 119 aa15.83■□□□□ 0.12
ITGB1-215ENST00000488494 ADAM11O75078 769 aa15.83■□□□□ 0.12
ITGB1-215ENST00000488494 TGDSO95455 350 aa15.83■□□□□ 0.12
ITGB1-215ENST00000488494 ETFAP13804 333 aa15.83■□□□□ 0.12
ITGB1-215ENST00000488494 RPS4Y1P22090 263 aaKnown RBP15.83■□□□□ 0.12
ITGB1-215ENST00000488494 CRATP43155 626 aa15.83■□□□□ 0.12
ITGB1-215ENST00000488494 IDH3AP50213 366 aa15.83■□□□□ 0.12
ITGB1-215ENST00000488494 MVDP53602 400 aa15.83■□□□□ 0.12
ITGB1-215ENST00000488494 AP1ARQ63HQ0 302 aa15.83■□□□□ 0.12
ITGB1-215ENST00000488494 SPNS3Q6ZMD2 512 aa15.83■□□□□ 0.12
ITGB1-215ENST00000488494 WDR60Q8WVS4 1066 aa15.83■□□□□ 0.12
ITGB1-215ENST00000488494 CNOT9Q92600 299 aaKnown RBP15.83■□□□□ 0.12
ITGB1-215ENST00000488494 SERINC1Q9NRX5 453 aa15.83■□□□□ 0.12
ITGB1-215ENST00000488494 INTS9Q9NV88 658 aaKnown RBP15.83■□□□□ 0.12
ITGB1-215ENST00000488494 AKAP6Q13023 2319 aa15.82■□□□□ 0.12
ITGB1-215ENST00000488494 A0A1W2PPR1 153 aa15.82■□□□□ 0.12
ITGB1-215ENST00000488494 NR5A2O00482 541 aa15.82■□□□□ 0.12
ITGB1-215ENST00000488494 AP3D1O14617 1153 aa15.82■□□□□ 0.12
ITGB1-215ENST00000488494 SIAH2O43255 324 aa15.82■□□□□ 0.12
ITGB1-215ENST00000488494 BCHEP06276 602 aa15.82■□□□□ 0.12
ITGB1-215ENST00000488494 ZCCHC18P0CG32 403 aa15.82■□□□□ 0.12
ITGB1-215ENST00000488494 CD1EP15812 388 aa15.82■□□□□ 0.12
ITGB1-215ENST00000488494 KLK2P20151 261 aa15.82■□□□□ 0.12
ITGB1-215ENST00000488494 ENPP1P22413 925 aa15.82■□□□□ 0.12
ITGB1-215ENST00000488494 DNASE1P24855 282 aa15.82■□□□□ 0.12
ITGB1-215ENST00000488494 MAGEA8P43361 318 aa15.82■□□□□ 0.12
ITGB1-215ENST00000488494 AQP5P55064 265 aa15.82■□□□□ 0.12
ITGB1-215ENST00000488494 DSTNP60981 165 aa15.82■□□□□ 0.12
ITGB1-215ENST00000488494 PPP2R2AP63151 447 aa15.82■□□□□ 0.12
ITGB1-215ENST00000488494 MAPK11Q15759 364 aa15.82■□□□□ 0.12
ITGB1-215ENST00000488494 SYT14P1Q58G82 188 aa15.82■□□□□ 0.12
ITGB1-215ENST00000488494 TMEM201Q5SNT2 666 aa15.82■□□□□ 0.12
ITGB1-215ENST00000488494 ANKRD34AQ69YU3 496 aa15.82■□□□□ 0.12
ITGB1-215ENST00000488494 GTF2IRD2BQ6EKJ0 949 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms