RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 DESI2Q9BSY9 194 aa3.16□□□□□ -1.9
ITGB1-214ENST00000488427 ELOVL4Q9GZR5 314 aa3.16□□□□□ -1.9
ITGB1-214ENST00000488427 TSPY26PQ9H489 355 aa3.16□□□□□ -1.9
ITGB1-214ENST00000488427 MID1IP1Q9NPA3 183 aa3.16□□□□□ -1.9
ITGB1-214ENST00000488427 NRN1Q9NPD7 142 aa3.16□□□□□ -1.9
ITGB1-214ENST00000488427 HEBP1Q9NRV9 189 aa3.16□□□□□ -1.9
ITGB1-214ENST00000488427 PRODH2Q9UF12 536 aa3.16□□□□□ -1.9
ITGB1-214ENST00000488427 RNF115Q9Y4L5 304 aa3.16□□□□□ -1.9
ITGB1-214ENST00000488427 DDX49Q9Y6V7 483 aaKnown RBP3.16□□□□□ -1.9
ITGB1-214ENST00000488427 MYH7P12883 1935 aa3.16□□□□□ -1.9
ITGB1-214ENST00000488427 PLXND1Q9Y4D7 1925 aa3.16□□□□□ -1.9
ITGB1-214ENST00000488427 KNL1Q8NG31 2342 aa3.16□□□□□ -1.9
ITGB1-214ENST00000488427 NRCAMQ92823 1304 aa3.16□□□□□ -1.9
ITGB1-214ENST00000488427 KIAA1549LQ6ZVL6 1849 aa3.15□□□□□ -1.91
ITGB1-214ENST00000488427 ZFC3H1O60293 1989 aaKnown RBP3.15□□□□□ -1.91
ITGB1-214ENST00000488427 KLF18A0A0U1RQI7 1052 aa3.15□□□□□ -1.91
ITGB1-214ENST00000488427 FAM220BPB1ANY3 271 aa3.15□□□□□ -1.91
ITGB1-214ENST00000488427 H0Y9J4 135 aa3.15□□□□□ -1.91
ITGB1-214ENST00000488427 IGHV3-9P01782 118 aa3.15□□□□□ -1.91
ITGB1-214ENST00000488427 IGFBP5P24593 272 aa3.15□□□□□ -1.91
ITGB1-214ENST00000488427 CXCL6P80162 114 aa3.15□□□□□ -1.91
ITGB1-214ENST00000488427 RPA4Q13156 261 aa3.15□□□□□ -1.91
ITGB1-214ENST00000488427 SERTAD2Q14140 314 aa3.15□□□□□ -1.91
ITGB1-214ENST00000488427 KARSQ15046 597 aaKnown RBP3.15□□□□□ -1.91
ITGB1-214ENST00000488427 BEND3Q5T5X7 828 aa3.15□□□□□ -1.91
ITGB1-214ENST00000488427 C11orf42Q8N5U0 333 aa3.15□□□□□ -1.91
ITGB1-214ENST00000488427 OR52J3Q8NH60 311 aa3.15□□□□□ -1.91
ITGB1-214ENST00000488427 RFESDQ8TAC1 157 aa3.15□□□□□ -1.91
ITGB1-214ENST00000488427 LHX4Q969G2 390 aa3.15□□□□□ -1.91
ITGB1-214ENST00000488427 PIWIL1Q96J94 861 aaKnown RBP3.15□□□□□ -1.91
ITGB1-214ENST00000488427 CFAP53Q96M91 514 aa3.15□□□□□ -1.91
ITGB1-214ENST00000488427 RANBP9Q96S59 729 aa3.15□□□□□ -1.91
ITGB1-214ENST00000488427 STARD5Q9NSY2 213 aa3.15□□□□□ -1.91
ITGB1-214ENST00000488427 ANAPC11Q9NYG5 84 aa3.15□□□□□ -1.91
ITGB1-214ENST00000488427 MTRRQ9UBK8 725 aa3.15□□□□□ -1.91
ITGB1-214ENST00000488427 COPS7AQ9UBW8 275 aa3.15□□□□□ -1.91
ITGB1-214ENST00000488427 KLHL21Q9UJP4 597 aa3.15□□□□□ -1.91
ITGB1-214ENST00000488427 PURGQ9UJV8 347 aaKnown RBP3.15□□□□□ -1.91
ITGB1-214ENST00000488427 ZNF175Q9Y473 711 aa3.15□□□□□ -1.91
ITGB1-214ENST00000488427 PRRC2AP48634 2157 aaKnown RBP3.14□□□□□ -1.91
ITGB1-214ENST00000488427 DOCK5Q9H7D0 1870 aa3.14□□□□□ -1.91
ITGB1-214ENST00000488427 CSMD2Q7Z408 3487 aa3.14□□□□□ -1.91
ITGB1-214ENST00000488427 DIDO1Q9BTC0 2240 aaKnown RBP3.14□□□□□ -1.91
ITGB1-214ENST00000488427 LRIT2A6NDA9 550 aa3.14□□□□□ -1.91
ITGB1-214ENST00000488427 C5orf51A6NDU8 294 aa3.14□□□□□ -1.91
ITGB1-214ENST00000488427 G3V3Y1 287 aa3.14□□□□□ -1.91
ITGB1-214ENST00000488427 SAP18O00422 153 aaKnown RBP3.14□□□□□ -1.91
ITGB1-214ENST00000488427 MPHOSPH10O00566 681 aaKnown RBP3.14□□□□□ -1.91
ITGB1-214ENST00000488427 HDAC3O15379 428 aa3.14□□□□□ -1.91
ITGB1-214ENST00000488427 CXCL14O95715 111 aa3.14□□□□□ -1.91
ITGB1-214ENST00000488427 ECDO95905 644 aaPredicted RBP3.14□□□□□ -1.91
ITGB1-214ENST00000488427 ZBTB25P24278 435 aa3.14□□□□□ -1.91
ITGB1-214ENST00000488427 FASP25445 335 aa3.14□□□□□ -1.91
ITGB1-214ENST00000488427 RPA1P27694 616 aa3.14□□□□□ -1.91
ITGB1-214ENST00000488427 ASAH1Q13510 395 aa3.14□□□□□ -1.91
ITGB1-214ENST00000488427 RFTN1Q14699 578 aaPredicted RBP3.14□□□□□ -1.91
ITGB1-214ENST00000488427 ZIC1Q15915 447 aa3.14□□□□□ -1.91
ITGB1-214ENST00000488427 ISXQ2M1V0 245 aa3.14□□□□□ -1.91
ITGB1-214ENST00000488427 DPY19L2P2Q6ZN68 376 aa3.14□□□□□ -1.91
ITGB1-214ENST00000488427 GPBP1Q86WP2 473 aa3.14□□□□□ -1.91
ITGB1-214ENST00000488427 MSANTD4Q8NCY6 345 aa3.14□□□□□ -1.91
ITGB1-214ENST00000488427 FAM3CQ92520 227 aa3.14□□□□□ -1.91
ITGB1-214ENST00000488427 FGF11Q92914 225 aa3.14□□□□□ -1.91
ITGB1-214ENST00000488427 ATP6V0A1Q93050 837 aa3.14□□□□□ -1.91
ITGB1-214ENST00000488427 CASD1Q96PB1 797 aa3.14□□□□□ -1.91
ITGB1-214ENST00000488427 ACCSQ96QU6 501 aa3.14□□□□□ -1.91
ITGB1-214ENST00000488427 KIR2DL4Q99706 377 aa3.14□□□□□ -1.91
ITGB1-214ENST00000488427 FTHL17Q9BXU8 183 aa3.14□□□□□ -1.91
ITGB1-214ENST00000488427 OPN3Q9H1Y3 402 aaPredicted RBP3.14□□□□□ -1.91
ITGB1-214ENST00000488427 VCPKMTQ9H867 229 aa3.14□□□□□ -1.91
ITGB1-214ENST00000488427 ADGRL4Q9HBW9 690 aa3.14□□□□□ -1.91
ITGB1-214ENST00000488427 EXOSC3Q9NQT5 275 aaKnown RBP3.14□□□□□ -1.91
ITGB1-214ENST00000488427 ZNF446Q9NWS9 450 aa3.14□□□□□ -1.91
ITGB1-214ENST00000488427 NYAP2Q9P242 653 aa3.14□□□□□ -1.91
ITGB1-214ENST00000488427 LHX3Q9UBR4 397 aa3.14□□□□□ -1.91
ITGB1-214ENST00000488427 TRIM10Q9UDY6 481 aa3.14□□□□□ -1.91
ITGB1-214ENST00000488427 IKZF3Q9UKT9 509 aa3.14□□□□□ -1.91
ITGB1-214ENST00000488427 TDRKHQ9Y2W6 561 aaKnown RBP3.14□□□□□ -1.91
ITGB1-214ENST00000488427 FLVCR1Q9Y5Y0 555 aa3.14□□□□□ -1.91
ITGB1-214ENST00000488427 DOCK9Q9BZ29 2069 aa3.14□□□□□ -1.91
ITGB1-214ENST00000488427 TACC2O95359 2948 aa3.14□□□□□ -1.91
ITGB1-214ENST00000488427 ZMYM6O95789 1325 aa3.14□□□□□ -1.91
ITGB1-214ENST00000488427 NSD1Q96L73 2696 aaPredicted RBP3.14□□□□□ -1.91
ITGB1-214ENST00000488427 IGHV3-35A0A0C4DH35 117 aa3.13□□□□□ -1.91
ITGB1-214ENST00000488427 PDLIM1O00151 329 aa3.13□□□□□ -1.91
ITGB1-214ENST00000488427 LAMP1P11279 417 aa3.13□□□□□ -1.91
ITGB1-214ENST00000488427 HLA-DPA1P20036 260 aa3.13□□□□□ -1.91
ITGB1-214ENST00000488427 NPY2RP49146 381 aa3.13□□□□□ -1.91
ITGB1-214ENST00000488427 SLC26A2P50443 739 aa3.13□□□□□ -1.91
ITGB1-214ENST00000488427 CNN1P51911 297 aaKnown RBP3.13□□□□□ -1.91
ITGB1-214ENST00000488427 MECOMQ03112 1051 aa3.13□□□□□ -1.91
ITGB1-214ENST00000488427 KLRC3Q07444 240 aa3.13□□□□□ -1.91
ITGB1-214ENST00000488427 IGFBP7Q16270 282 aa3.13□□□□□ -1.91
ITGB1-214ENST00000488427 CLPPQ16740 277 aaPredicted RBP3.13□□□□□ -1.91
ITGB1-214ENST00000488427 PAN3Q58A45 887 aaKnown RBP3.13□□□□□ -1.91
ITGB1-214ENST00000488427 LGSNQ5TDP6 509 aa3.13□□□□□ -1.91
ITGB1-214ENST00000488427 SLC22A10Q63ZE4 541 aa3.13□□□□□ -1.91
ITGB1-214ENST00000488427 DLEU7Q6UYE1 221 aa3.13□□□□□ -1.91
ITGB1-214ENST00000488427 Q6ZS52 159 aa3.13□□□□□ -1.91
ITGB1-214ENST00000488427 MIER3Q7Z3K6 550 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms