RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 OR11A1Q9GZK7 315 aa1.77□□□□□ -2.13
SMC4-219ENST00000487747 CDC42EP4Q9H3Q1 356 aaKnown RBP1.77□□□□□ -2.13
SMC4-219ENST00000487747 SIRT7Q9NRC8 400 aa1.77□□□□□ -2.13
SMC4-219ENST00000487747 DEC1Q9P2X7 70 aa1.77□□□□□ -2.13
SMC4-219ENST00000487747 ASF1AQ9Y294 204 aa1.77□□□□□ -2.13
SMC4-219ENST00000487747 FRMPD3Q5JV73 1810 aa1.77□□□□□ -2.13
SMC4-219ENST00000487747 A0A0U1RQG5 324 aaPredicted RBP1.76□□□□□ -2.13
SMC4-219ENST00000487747 E9PMD0 336 aa1.76□□□□□ -2.13
SMC4-219ENST00000487747 H3BMQ9 156 aa1.76□□□□□ -2.13
SMC4-219ENST00000487747 SGK494L7N484 410 aa1.76□□□□□ -2.13
SMC4-219ENST00000487747 SULT2B1O00204 365 aa1.76□□□□□ -2.13
SMC4-219ENST00000487747 NMUP48645 174 aa1.76□□□□□ -2.13
SMC4-219ENST00000487747 CCDC173Q0VFZ6 552 aa1.76□□□□□ -2.13
SMC4-219ENST00000487747 SMU1Q2TAY7 513 aa1.76□□□□□ -2.13
SMC4-219ENST00000487747 LIPNQ5VXI9 398 aa1.76□□□□□ -2.13
SMC4-219ENST00000487747 FAM199XQ6PEV8 388 aaPredicted RBP1.76□□□□□ -2.13
SMC4-219ENST00000487747 ARRDC1Q8N5I2 433 aa1.76□□□□□ -2.13
SMC4-219ENST00000487747 LEMD2Q8NC56 503 aa1.76□□□□□ -2.13
SMC4-219ENST00000487747 NDRG1Q92597 394 aaKnown RBP1.76□□□□□ -2.13
SMC4-219ENST00000487747 UPRTQ96BW1 309 aa1.76□□□□□ -2.13
SMC4-219ENST00000487747 GPR61Q9BZJ8 451 aa1.76□□□□□ -2.13
SMC4-219ENST00000487747 C1orf123Q9NWV4 160 aa1.76□□□□□ -2.13
SMC4-219ENST00000487747 TREM2Q9NZC2 230 aa1.76□□□□□ -2.13
SMC4-219ENST00000487747 WRAP73Q9P2S5 460 aaPredicted RBP1.76□□□□□ -2.13
SMC4-219ENST00000487747 P2RX2Q9UBL9 471 aa1.76□□□□□ -2.13
SMC4-219ENST00000487747 CRLS1Q9UJA2 301 aa1.76□□□□□ -2.13
SMC4-219ENST00000487747 SHANK1Q9Y566 2161 aa1.75□□□□□ -2.13
SMC4-219ENST00000487747 IGSF9BQ9UPX0 1349 aa1.75□□□□□ -2.13
SMC4-219ENST00000487747 HELTA6NFD8 242 aa1.75□□□□□ -2.13
SMC4-219ENST00000487747 FAM74A7A6NL05 159 aa1.75□□□□□ -2.13
SMC4-219ENST00000487747 PP2D1A8MPX8 630 aa1.75□□□□□ -2.13
SMC4-219ENST00000487747 ANGPTL7O43827 346 aa1.75□□□□□ -2.13
SMC4-219ENST00000487747 HSP90AB1P08238 724 aaKnown RBP1.75□□□□□ -2.13
SMC4-219ENST00000487747 ANXA3P12429 323 aa1.75□□□□□ -2.13
SMC4-219ENST00000487747 MUC1P15941 1255 aaPredicted RBP1.75□□□□□ -2.13
SMC4-219ENST00000487747 H2AFXP16104 143 aaPredicted RBP1.75□□□□□ -2.13
SMC4-219ENST00000487747 PRDX2P32119 198 aa1.75□□□□□ -2.13
SMC4-219ENST00000487747 RGS1Q08116 209 aa1.75□□□□□ -2.13
SMC4-219ENST00000487747 FAM74A3Q4VXF1 159 aa1.75□□□□□ -2.13
SMC4-219ENST00000487747 SCYL2Q6P3W7 929 aa1.75□□□□□ -2.13
SMC4-219ENST00000487747 TMEM184AQ6ZMB5 413 aa1.75□□□□□ -2.13
SMC4-219ENST00000487747 LANCL3Q6ZV70 420 aa1.75□□□□□ -2.13
SMC4-219ENST00000487747 LRRC70Q7Z2Q7 622 aa1.75□□□□□ -2.13
SMC4-219ENST00000487747 Q8N976 141 aa1.75□□□□□ -2.13
SMC4-219ENST00000487747 CNIH3Q8TBE1 160 aa1.75□□□□□ -2.13
SMC4-219ENST00000487747 ACER1Q8TDN7 264 aa1.75□□□□□ -2.13
SMC4-219ENST00000487747 PTP4A1Q93096 173 aa1.75□□□□□ -2.13
SMC4-219ENST00000487747 IFI27L2Q9H2X8 130 aa1.75□□□□□ -2.13
SMC4-219ENST00000487747 SLC25A37Q9NYZ2 338 aa1.75□□□□□ -2.13
SMC4-219ENST00000487747 STX11O75558 287 aa1.74□□□□□ -2.13
SMC4-219ENST00000487747 HMOX1P09601 288 aa1.74□□□□□ -2.13
SMC4-219ENST00000487747 RNH1P13489 461 aaKnown RBP1.74□□□□□ -2.13
SMC4-219ENST00000487747 NMT1P30419 496 aaKnown RBP1.74□□□□□ -2.13
SMC4-219ENST00000487747 CASP3P42574 277 aa1.74□□□□□ -2.13
SMC4-219ENST00000487747 TNNT3P45378 269 aaPredicted RBP1.74□□□□□ -2.13
SMC4-219ENST00000487747 TAS2R19P59542 299 aa1.74□□□□□ -2.13
SMC4-219ENST00000487747 CACNG7P62955 275 aa1.74□□□□□ -2.13
SMC4-219ENST00000487747 NDUFA9Q16795 377 aa1.74□□□□□ -2.13
SMC4-219ENST00000487747 CTRB2Q6GPI1 263 aa1.74□□□□□ -2.13
SMC4-219ENST00000487747 OR5B2Q96R09 309 aa1.74□□□□□ -2.13
SMC4-219ENST00000487747 NPAS2Q99743 824 aa1.74□□□□□ -2.13
SMC4-219ENST00000487747 FEM1AQ9BSK4 669 aa1.74□□□□□ -2.13
SMC4-219ENST00000487747 ZNF229Q9UJW7 825 aa1.74□□□□□ -2.13
SMC4-219ENST00000487747 OR6C65A6NJZ3 312 aa1.73□□□□□ -2.13
SMC4-219ENST00000487747 HCRTR1O43613 425 aa1.73□□□□□ -2.13
SMC4-219ENST00000487747 HSP90AA1P07900 732 aaKnown RBP1.73□□□□□ -2.13
SMC4-219ENST00000487747 HBQ1P09105 142 aa1.73□□□□□ -2.13
SMC4-219ENST00000487747 TSPY4P0CV99 314 aa1.73□□□□□ -2.13
SMC4-219ENST00000487747 TSPY10P0CW01 314 aa1.73□□□□□ -2.13
SMC4-219ENST00000487747 PNMA6AP0CW24 399 aaPredicted RBP1.73□□□□□ -2.13
SMC4-219ENST00000487747 ICAM2P13598 275 aa1.73□□□□□ -2.13
SMC4-219ENST00000487747 PRDX6P30041 224 aa1.73□□□□□ -2.13
SMC4-219ENST00000487747 BDKRB1P46663 353 aa1.73□□□□□ -2.13
SMC4-219ENST00000487747 BIDP55957 195 aa1.73□□□□□ -2.13
SMC4-219ENST00000487747 BDH1Q02338 343 aa1.73□□□□□ -2.13
SMC4-219ENST00000487747 GFPT1Q06210 699 aaPredicted RBP1.73□□□□□ -2.13
SMC4-219ENST00000487747 ZNF763Q0D2J5 394 aa1.73□□□□□ -2.13
SMC4-219ENST00000487747 LAGE3Q14657 143 aa1.73□□□□□ -2.13
SMC4-219ENST00000487747 LPCAT2Q7L5N7 544 aa1.73□□□□□ -2.13
SMC4-219ENST00000487747 CALHM3Q86XJ0 350 aa1.73□□□□□ -2.13
SMC4-219ENST00000487747 LINC00304Q8N9R0 145 aa1.73□□□□□ -2.13
SMC4-219ENST00000487747 ARPC1AQ92747 370 aa1.73□□□□□ -2.13
SMC4-219ENST00000487747 SDSLQ96GA7 329 aa1.73□□□□□ -2.13
SMC4-219ENST00000487747 CDX2Q99626 313 aaPredicted RBP1.73□□□□□ -2.13
SMC4-219ENST00000487747 SPATA16Q9BXB7 569 aa1.73□□□□□ -2.13
SMC4-219ENST00000487747 DDX47Q9H0S4 455 aaKnown RBP1.73□□□□□ -2.13
SMC4-219ENST00000487747 SPNS1Q9H2V7 528 aa1.73□□□□□ -2.13
SMC4-219ENST00000487747 CALHM2Q9HA72 323 aa1.73□□□□□ -2.13
SMC4-219ENST00000487747 PLGRKTQ9HBL7 147 aa1.73□□□□□ -2.13
SMC4-219ENST00000487747 APPL1Q9UKG1 709 aa1.73□□□□□ -2.13
SMC4-219ENST00000487747 MAD1L1Q9Y6D9 718 aa1.73□□□□□ -2.13
SMC4-219ENST00000487747 PLA2R1Q13018 1463 aa1.73□□□□□ -2.13
SMC4-219ENST00000487747 PDS5BQ9NTI5 1447 aa1.73□□□□□ -2.13
SMC4-219ENST00000487747 NLRC5Q86WI3 1866 aa1.72□□□□□ -2.13
SMC4-219ENST00000487747 IGHV3OR16-13A0A075B7E8 117 aa1.72□□□□□ -2.13
SMC4-219ENST00000487747 WASHC1A8K0Z3 465 aa1.72□□□□□ -2.13
SMC4-219ENST00000487747 WASH3PC4AMC7 463 aa1.72□□□□□ -2.13
SMC4-219ENST00000487747 E9PBE3 544 aa1.72□□□□□ -2.13
SMC4-219ENST00000487747 KIF2AO00139 706 aaPredicted RBP1.72□□□□□ -2.13
SMC4-219ENST00000487747 BET1O15155 118 aa1.72□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms