RNA–Protein interactions for RNA: ENST00000487496.1

SPEN-205, Transcript of spen family transcriptional repressor, humanhuman

TSL 1 (best)

Gene SPEN, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-205ENST00000487496 ZFP90Q8TF47 636 aa10.23□□□□□ -0.77
SPEN-205ENST00000487496 ABHD3Q8WU67 409 aa10.23□□□□□ -0.77
SPEN-205ENST00000487496 TMEM234Q8WY98 164 aa10.23□□□□□ -0.77
SPEN-205ENST00000487496 CPNE4Q96A23 557 aaPredicted RBP10.23□□□□□ -0.77
SPEN-205ENST00000487496 REXO5Q96IC2 774 aaKnown RBP10.23□□□□□ -0.77
SPEN-205ENST00000487496 TRNT1Q96Q11 434 aaKnown RBP10.23□□□□□ -0.77
SPEN-205ENST00000487496 QRSL1Q9H0R6 528 aaKnown RBP10.23□□□□□ -0.77
SPEN-205ENST00000487496 SLC38A1Q9H2H9 487 aa10.23□□□□□ -0.77
SPEN-205ENST00000487496 COQ10BQ9H8M1 238 aa10.23□□□□□ -0.77
SPEN-205ENST00000487496 PLEKHF2Q9H8W4 249 aa10.23□□□□□ -0.77
SPEN-205ENST00000487496 SLCO1B3Q9NPD5 702 aa10.23□□□□□ -0.77
SPEN-205ENST00000487496 ACER3Q9NUN7 267 aa10.23□□□□□ -0.77
SPEN-205ENST00000487496 KLHL28Q9NXS3 571 aa10.23□□□□□ -0.77
SPEN-205ENST00000487496 ST6GALNAC2Q9UJ37 374 aa10.23□□□□□ -0.77
SPEN-205ENST00000487496 SLC35A3Q9Y2D2 325 aa10.23□□□□□ -0.77
SPEN-205ENST00000487496 F8P00451 2351 aa10.22□□□□□ -0.77
SPEN-205ENST00000487496 UQCRHLA0A096LP55 91 aa10.22□□□□□ -0.77
SPEN-205ENST00000487496 AGAP5A6NIR3 686 aa10.22□□□□□ -0.77
SPEN-205ENST00000487496 CLDN24A6NM45 220 aa10.22□□□□□ -0.77
SPEN-205ENST00000487496 TGDSO95455 350 aa10.22□□□□□ -0.77
SPEN-205ENST00000487496 CHRM4P08173 479 aa10.22□□□□□ -0.77
SPEN-205ENST00000487496 ZCCHC18P0CG32 403 aa10.22□□□□□ -0.77
SPEN-205ENST00000487496 ENPP1P22413 925 aa10.22□□□□□ -0.77
SPEN-205ENST00000487496 SLC7A1P30825 629 aa10.22□□□□□ -0.77
SPEN-205ENST00000487496 POLR2JP52435 117 aaKnown RBP10.22□□□□□ -0.77
SPEN-205ENST00000487496 MVDP53602 400 aa10.22□□□□□ -0.77
SPEN-205ENST00000487496 RAC3P60763 192 aa10.22□□□□□ -0.77
SPEN-205ENST00000487496 KCNJ10P78508 379 aa10.22□□□□□ -0.77
SPEN-205ENST00000487496 PLAURQ03405 335 aa10.22□□□□□ -0.77
SPEN-205ENST00000487496 MERTKQ12866 999 aa10.22□□□□□ -0.77
SPEN-205ENST00000487496 RNPS1Q15287 305 aaKnown RBP10.22□□□□□ -0.77
SPEN-205ENST00000487496 MAPK11Q15759 364 aa10.22□□□□□ -0.77
SPEN-205ENST00000487496 EXOC3L2Q2M3D2 409 aa10.22□□□□□ -0.77
SPEN-205ENST00000487496 LRRC74BQ6ZQY2 392 aa10.22□□□□□ -0.77
SPEN-205ENST00000487496 MSANTD1Q6ZTZ1 278 aa10.22□□□□□ -0.77
SPEN-205ENST00000487496 C22orf34Q6ZV56 151 aa10.22□□□□□ -0.77
SPEN-205ENST00000487496 PLEKHM3Q6ZWE6 761 aa10.22□□□□□ -0.77
SPEN-205ENST00000487496 FCRLAQ7L513 359 aa10.22□□□□□ -0.77
SPEN-205ENST00000487496 HDXQ7Z353 690 aa10.22□□□□□ -0.77
SPEN-205ENST00000487496 VPS33AQ96AX1 596 aa10.22□□□□□ -0.77
SPEN-205ENST00000487496 MED18Q9BUE0 208 aa10.22□□□□□ -0.77
SPEN-205ENST00000487496 KLHL4Q9C0H6 718 aa10.22□□□□□ -0.77
SPEN-205ENST00000487496 RMND5AQ9H871 391 aa10.22□□□□□ -0.77
SPEN-205ENST00000487496 MTHFD2LQ9H903 347 aaPredicted RBP10.22□□□□□ -0.77
SPEN-205ENST00000487496 TCF7L2Q9NQB0 619 aa10.22□□□□□ -0.77
SPEN-205ENST00000487496 SERINC1Q9NRX5 453 aa10.22□□□□□ -0.77
SPEN-205ENST00000487496 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.22□□□□□ -0.77
SPEN-205ENST00000487496 CCM2LQ9NUG4 571 aaPredicted RBP10.22□□□□□ -0.77
SPEN-205ENST00000487496 ZNF226Q9NYT6 803 aa10.22□□□□□ -0.77
SPEN-205ENST00000487496 EDARQ9UNE0 448 aa10.22□□□□□ -0.77
SPEN-205ENST00000487496 PLEKHA6Q9Y2H5 1048 aa10.22□□□□□ -0.77
SPEN-205ENST00000487496 HEATR5AQ86XA9 2040 aa10.21□□□□□ -0.77
SPEN-205ENST00000487496 A0A1W2PNR3 127 aa10.21□□□□□ -0.77
SPEN-205ENST00000487496 A0A1W2PPR1 153 aa10.21□□□□□ -0.77
SPEN-205ENST00000487496 FAM234BA2RU67 622 aa10.21□□□□□ -0.77
SPEN-205ENST00000487496 DEFB108AA8MXU0 73 aa10.21□□□□□ -0.77
SPEN-205ENST00000487496 POLR3GO15318 223 aaPredicted RBP10.21□□□□□ -0.77
SPEN-205ENST00000487496 ADAM11O75078 769 aa10.21□□□□□ -0.77
SPEN-205ENST00000487496 PRKD3O94806 890 aa10.21□□□□□ -0.77
SPEN-205ENST00000487496 ANP32DO95626 131 aa10.21□□□□□ -0.77
SPEN-205ENST00000487496 NR2F1P10589 423 aa10.21□□□□□ -0.77
SPEN-205ENST00000487496 AGTR1P30556 359 aa10.21□□□□□ -0.77
SPEN-205ENST00000487496 RYKP34925 604 aa10.21□□□□□ -0.77
SPEN-205ENST00000487496 MAGEA8P43361 318 aa10.21□□□□□ -0.77
SPEN-205ENST00000487496 IDH3AP50213 366 aa10.21□□□□□ -0.77
SPEN-205ENST00000487496 GTDC1Q4AE62 458 aa10.21□□□□□ -0.77
SPEN-205ENST00000487496 TMEM201Q5SNT2 666 aa10.21□□□□□ -0.77
SPEN-205ENST00000487496 C6orf10Q5SRN2 563 aa10.21□□□□□ -0.77
SPEN-205ENST00000487496 ANKRD34AQ69YU3 496 aa10.21□□□□□ -0.77
SPEN-205ENST00000487496 C3orf33Q6P1S2 294 aa10.21□□□□□ -0.77
SPEN-205ENST00000487496 PAMR1Q6UXH9 720 aa10.21□□□□□ -0.77
SPEN-205ENST00000487496 STAC2Q6ZMT1 411 aa10.21□□□□□ -0.77
SPEN-205ENST00000487496 ZNF550Q7Z398 422 aa10.21□□□□□ -0.77
SPEN-205ENST00000487496 TUSC5Q8IXB3 177 aa10.21□□□□□ -0.77
SPEN-205ENST00000487496 GOLGA6L1Q8N7Z2 621 aa10.21□□□□□ -0.77
SPEN-205ENST00000487496 ZNF563Q8TA94 476 aa10.21□□□□□ -0.77
SPEN-205ENST00000487496 DYDC1Q8WWB3 177 aa10.21□□□□□ -0.77
SPEN-205ENST00000487496 CNOT9Q92600 299 aaKnown RBP10.21□□□□□ -0.77
SPEN-205ENST00000487496 PMM1Q92871 262 aa10.21□□□□□ -0.77
SPEN-205ENST00000487496 ITCHQ96J02 903 aa10.21□□□□□ -0.77
SPEN-205ENST00000487496 OR5B2Q96R09 309 aa10.21□□□□□ -0.77
SPEN-205ENST00000487496 FOXC2Q99958 501 aa10.21□□□□□ -0.77
SPEN-205ENST00000487496 EBF4Q9BQW3 602 aa10.21□□□□□ -0.77
SPEN-205ENST00000487496 CCDC106Q9BWC9 280 aa10.21□□□□□ -0.77
SPEN-205ENST00000487496 C12orf49Q9H741 205 aa10.21□□□□□ -0.77
SPEN-205ENST00000487496 VIPAS39Q9H9C1 493 aa10.21□□□□□ -0.77
SPEN-205ENST00000487496 TPT1P8Q9HAU6 139 aa10.21□□□□□ -0.77
SPEN-205ENST00000487496 GP6Q9HCN6 339 aa10.21□□□□□ -0.77
SPEN-205ENST00000487496 EXOSC3Q9NQT5 275 aaKnown RBP10.21□□□□□ -0.77
SPEN-205ENST00000487496 C6orf203Q9P0P8 240 aaPredicted RBP10.21□□□□□ -0.77
SPEN-205ENST00000487496 KLHL13Q9P2N7 655 aa10.21□□□□□ -0.77
SPEN-205ENST00000487496 IGHV3-15A0A0B4J1V0 119 aa10.2□□□□□ -0.78
SPEN-205ENST00000487496 HMGB1P1B2RPK0 211 aaPredicted RBP10.2□□□□□ -0.78
SPEN-205ENST00000487496 SIAH2O43255 324 aa10.2□□□□□ -0.78
SPEN-205ENST00000487496 YES1P07947 543 aa10.2□□□□□ -0.78
SPEN-205ENST00000487496 TFPTP0C1Z6 253 aa10.2□□□□□ -0.78
SPEN-205ENST00000487496 ETFAP13804 333 aa10.2□□□□□ -0.78
SPEN-205ENST00000487496 CD1EP15812 388 aa10.2□□□□□ -0.78
SPEN-205ENST00000487496 H2AFXP16104 143 aaPredicted RBP10.2□□□□□ -0.78
SPEN-205ENST00000487496 RPS4Y1P22090 263 aaKnown RBP10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms