RNA–Protein interactions for RNA: ENST00000487401.1

SREBF1-215, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-215ENST00000487401 ACER3Q9NUN7 267 aa11.08□□□□□ -0.64
SREBF1-215ENST00000487401 WDR45Q9Y484 360 aa11.08□□□□□ -0.64
SREBF1-215ENST00000487401 ABCA4P78363 2273 aa11.08□□□□□ -0.64
SREBF1-215ENST00000487401 ARHGAP21Q5T5U3 1957 aa11.07□□□□□ -0.64
SREBF1-215ENST00000487401 NIPBLQ6KC79 2804 aaeCLIP11.07□□□□□ -0.64
SREBF1-215ENST00000487401 C9JVG2 144 aa11.07□□□□□ -0.64
SREBF1-215ENST00000487401 ETV2O00321 342 aaPredicted RBP11.07□□□□□ -0.64
SREBF1-215ENST00000487401 PLAUP00749 431 aa11.07□□□□□ -0.64
SREBF1-215ENST00000487401 DHRS4L1P0CG22 281 aa11.07□□□□□ -0.64
SREBF1-215ENST00000487401 S100A3P33764 101 aa11.07□□□□□ -0.64
SREBF1-215ENST00000487401 KHKP50053 298 aa11.07□□□□□ -0.64
SREBF1-215ENST00000487401 NME5P56597 212 aa11.07□□□□□ -0.64
SREBF1-215ENST00000487401 SESN3P58005 492 aa11.07□□□□□ -0.64
SREBF1-215ENST00000487401 HPCAP84074 193 aa11.07□□□□□ -0.64
SREBF1-215ENST00000487401 RASGEF1BQ0VAM2 473 aa11.07□□□□□ -0.64
SREBF1-215ENST00000487401 SKP2Q13309 424 aa11.07□□□□□ -0.64
SREBF1-215ENST00000487401 TSC22D1Q15714 1073 aa11.07□□□□□ -0.64
SREBF1-215ENST00000487401 SFRP5Q5T4F7 317 aa11.07□□□□□ -0.64
SREBF1-215ENST00000487401 HHATQ5VTY9 493 aa11.07□□□□□ -0.64
SREBF1-215ENST00000487401 HEPHL1Q6MZM0 1159 aa11.07□□□□□ -0.64
SREBF1-215ENST00000487401 C3orf33Q6P1S2 294 aa11.07□□□□□ -0.64
SREBF1-215ENST00000487401 OLIG3Q7RTU3 272 aa11.07□□□□□ -0.64
SREBF1-215ENST00000487401 CROCCP2Q86T23 111 aa11.07□□□□□ -0.64
SREBF1-215ENST00000487401 LRRC34Q8IZ02 419 aa11.07□□□□□ -0.64
SREBF1-215ENST00000487401 GABRG1Q8N1C3 465 aa11.07□□□□□ -0.64
SREBF1-215ENST00000487401 ZNF563Q8TA94 476 aa11.07□□□□□ -0.64
SREBF1-215ENST00000487401 RAB8BQ92930 207 aa11.07□□□□□ -0.64
SREBF1-215ENST00000487401 KISS1RQ969F8 398 aaPredicted RBP11.07□□□□□ -0.64
SREBF1-215ENST00000487401 TESCQ96BS2 214 aa11.07□□□□□ -0.64
SREBF1-215ENST00000487401 ZNF775Q96BV0 537 aaPredicted RBP11.07□□□□□ -0.64
SREBF1-215ENST00000487401 ZBTB9Q96C00 473 aa11.07□□□□□ -0.64
SREBF1-215ENST00000487401 ZNF524Q96C55 264 aa11.07□□□□□ -0.64
SREBF1-215ENST00000487401 ROPN1LQ96C74 230 aa11.07□□□□□ -0.64
SREBF1-215ENST00000487401 SORT1Q99523 831 aa11.07□□□□□ -0.64
SREBF1-215ENST00000487401 C20orf27Q9GZN8 174 aa11.07□□□□□ -0.64
SREBF1-215ENST00000487401 PNPOQ9NVS9 261 aa11.07□□□□□ -0.64
SREBF1-215ENST00000487401 KCNE5Q9UJ90 142 aa11.07□□□□□ -0.64
SREBF1-215ENST00000487401 SLC35A3Q9Y2D2 325 aa11.07□□□□□ -0.64
SREBF1-215ENST00000487401 SPIN1Q9Y657 262 aaPredicted RBP11.07□□□□□ -0.64
SREBF1-215ENST00000487401 EXPH5Q8NEV8 1989 aa11.07□□□□□ -0.64
SREBF1-215ENST00000487401 H7C1Q1 480 aa11.06□□□□□ -0.64
SREBF1-215ENST00000487401 HS3ST1O14792 307 aa11.06□□□□□ -0.64
SREBF1-215ENST00000487401 SMAD7O15105 426 aaKnown RBP11.06□□□□□ -0.64
SREBF1-215ENST00000487401 CLOCKO15516 846 aa11.06□□□□□ -0.64
SREBF1-215ENST00000487401 KIAA0513O60268 411 aa11.06□□□□□ -0.64
SREBF1-215ENST00000487401 DNAJA2O60884 412 aa11.06□□□□□ -0.64
SREBF1-215ENST00000487401 SCN2BO60939 215 aa11.06□□□□□ -0.64
SREBF1-215ENST00000487401 TMCC2O75069 709 aa11.06□□□□□ -0.64
SREBF1-215ENST00000487401 GCM2O75603 506 aaPredicted RBP11.06□□□□□ -0.64
SREBF1-215ENST00000487401 H6PDO95479 791 aa11.06□□□□□ -0.64
SREBF1-215ENST00000487401 GUSBP08236 651 aa11.06□□□□□ -0.64
SREBF1-215ENST00000487401 TFPIP10646 304 aa11.06□□□□□ -0.64
SREBF1-215ENST00000487401 NID1P14543 1247 aa11.06□□□□□ -0.64
SREBF1-215ENST00000487401 PTH2RP49190 550 aa11.06□□□□□ -0.64
SREBF1-215ENST00000487401 CSNK2A1P68400 391 aaPredicted RBP11.06□□□□□ -0.64
SREBF1-215ENST00000487401 PHC1P78364 1004 aa11.06□□□□□ -0.64
SREBF1-215ENST00000487401 ITGADQ13349 1161 aa11.06□□□□□ -0.64
SREBF1-215ENST00000487401 MPP2Q14168 576 aa11.06□□□□□ -0.64
SREBF1-215ENST00000487401 MAPK14Q16539 360 aa11.06□□□□□ -0.64
SREBF1-215ENST00000487401 DPY19L1Q2PZI1 675 aa11.06□□□□□ -0.64
SREBF1-215ENST00000487401 GPAT3Q53EU6 434 aa11.06□□□□□ -0.64
SREBF1-215ENST00000487401 SPANXN4Q5MJ08 99 aa11.06□□□□□ -0.64
SREBF1-215ENST00000487401 SAXO2Q658L1 398 aa11.06□□□□□ -0.64
SREBF1-215ENST00000487401 TMPPEQ6ZT21 453 aa11.06□□□□□ -0.64
SREBF1-215ENST00000487401 BHLHA15Q7RTS1 189 aaPredicted RBP11.06□□□□□ -0.64
SREBF1-215ENST00000487401 ZNF100Q8IYN0 542 aa11.06□□□□□ -0.64
SREBF1-215ENST00000487401 ZNF619Q8N2I2 560 aa11.06□□□□□ -0.64
SREBF1-215ENST00000487401 TRIML2Q8N7C3 387 aa11.06□□□□□ -0.64
SREBF1-215ENST00000487401 ZNF611Q8N823 705 aa11.06□□□□□ -0.64
SREBF1-215ENST00000487401 SLC25A43Q8WUT9 341 aaPredicted RBP11.06□□□□□ -0.64
SREBF1-215ENST00000487401 OIT3Q8WWZ8 545 aa11.06□□□□□ -0.64
SREBF1-215ENST00000487401 AKAP1Q92667 903 aaKnown RBP eCLIP11.06□□□□□ -0.64
SREBF1-215ENST00000487401 ZHX1-C8orf76Q96EF9 292 aa11.06□□□□□ -0.64
SREBF1-215ENST00000487401 NEURL3Q96EH8 262 aa11.06□□□□□ -0.64
SREBF1-215ENST00000487401 ZBTB18Q99592 522 aa11.06□□□□□ -0.64
SREBF1-215ENST00000487401 SLC35A5Q9BS91 424 aa11.06□□□□□ -0.64
SREBF1-215ENST00000487401 GSX2Q9BZM3 304 aa11.06□□□□□ -0.64
SREBF1-215ENST00000487401 ESRP2Q9H6T0 727 aaKnown RBP11.06□□□□□ -0.64
SREBF1-215ENST00000487401 MEAF6Q9HAF1 191 aa11.06□□□□□ -0.64
SREBF1-215ENST00000487401 BCO1Q9HAY6 547 aa11.06□□□□□ -0.64
SREBF1-215ENST00000487401 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.06□□□□□ -0.64
SREBF1-215ENST00000487401 MARCOQ9UEW3 520 aaPredicted RBP11.06□□□□□ -0.64
SREBF1-215ENST00000487401 HAO1Q9UJM8 370 aa11.06□□□□□ -0.64
SREBF1-215ENST00000487401 FREM3P0C091 2139 aa11.05□□□□□ -0.64
SREBF1-215ENST00000487401 CENPVL1A0A0U1RR11 272 aa11.05□□□□□ -0.64
SREBF1-215ENST00000487401 ZNF724A8MTY0 619 aa11.05□□□□□ -0.64
SREBF1-215ENST00000487401 E9PBE3 544 aa11.05□□□□□ -0.64
SREBF1-215ENST00000487401 SULT2B1O00204 365 aa11.05□□□□□ -0.64
SREBF1-215ENST00000487401 ANKRD28O15084 1053 aa11.05□□□□□ -0.64
SREBF1-215ENST00000487401 CYTIPO60759 359 aa11.05□□□□□ -0.64
SREBF1-215ENST00000487401 FESP07332 822 aa11.05□□□□□ -0.64
SREBF1-215ENST00000487401 CD3EP07766 207 aa11.05□□□□□ -0.64
SREBF1-215ENST00000487401 FKBP2P26885 142 aaKnown RBP11.05□□□□□ -0.64
SREBF1-215ENST00000487401 RYKP34925 604 aa11.05□□□□□ -0.64
SREBF1-215ENST00000487401 PGM1P36871 562 aa11.05□□□□□ -0.64
SREBF1-215ENST00000487401 APOBEC1P41238 236 aaKnown RBP11.05□□□□□ -0.64
SREBF1-215ENST00000487401 OR3A2P47893 321 aa11.05□□□□□ -0.64
SREBF1-215ENST00000487401 ANXA11P50995 505 aaKnown RBP11.05□□□□□ -0.64
SREBF1-215ENST00000487401 BST1Q10588 318 aa11.05□□□□□ -0.64
SREBF1-215ENST00000487401 CASP8Q14790 479 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms