RNA–Protein interactions for RNA: ENST00000485746.1

PTCD1-205, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 3

Gene PTCD1, Length 721 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-205ENST00000485746 ROBO4Q8WZ75 1007 aa11.23□□□□□ -0.61
PTCD1-205ENST00000485746 CNOT9Q92600 299 aaKnown RBP11.23□□□□□ -0.61
PTCD1-205ENST00000485746 CPNE4Q96A23 557 aaPredicted RBP11.23□□□□□ -0.61
PTCD1-205ENST00000485746 C14orf79Q96F83 325 aa11.23□□□□□ -0.61
PTCD1-205ENST00000485746 TMEM19Q96HH6 336 aa11.23□□□□□ -0.61
PTCD1-205ENST00000485746 OR5B2Q96R09 309 aa11.23□□□□□ -0.61
PTCD1-205ENST00000485746 RNF122Q9H9V4 155 aa11.23□□□□□ -0.61
PTCD1-205ENST00000485746 ACER3Q9NUN7 267 aa11.23□□□□□ -0.61
PTCD1-205ENST00000485746 KCNN3Q9UGI6 736 aa11.23□□□□□ -0.61
PTCD1-205ENST00000485746 CLEC4AQ9UMR7 237 aa11.23□□□□□ -0.61
PTCD1-205ENST00000485746 PROCRQ9UNN8 238 aa11.23□□□□□ -0.61
PTCD1-205ENST00000485746 IFT52Q9Y366 437 aa11.23□□□□□ -0.61
PTCD1-205ENST00000485746 A0A1W2PNR3 127 aa11.22□□□□□ -0.61
PTCD1-205ENST00000485746 CFAP73A6NFT4 308 aa11.22□□□□□ -0.61
PTCD1-205ENST00000485746 MSTNO14793 375 aa11.22□□□□□ -0.61
PTCD1-205ENST00000485746 TFPTP0C1Z6 253 aa11.22□□□□□ -0.61
PTCD1-205ENST00000485746 NID1P14543 1247 aa11.22□□□□□ -0.61
PTCD1-205ENST00000485746 IGFBP2P18065 325 aa11.22□□□□□ -0.61
PTCD1-205ENST00000485746 CCNA2P20248 432 aa11.22□□□□□ -0.61
PTCD1-205ENST00000485746 SHC1P29353 583 aa11.22□□□□□ -0.61
PTCD1-205ENST00000485746 MVDP53602 400 aa11.22□□□□□ -0.61
PTCD1-205ENST00000485746 CTU2Q2VPK5 515 aaKnown RBP11.22□□□□□ -0.61
PTCD1-205ENST00000485746 FBXL19-AS1Q494R0 122 aa11.22□□□□□ -0.61
PTCD1-205ENST00000485746 MMEL1Q495T6 779 aa11.22□□□□□ -0.61
PTCD1-205ENST00000485746 SLC25A53Q5H9E4 307 aa11.22□□□□□ -0.61
PTCD1-205ENST00000485746 LRIF1Q5T3J3 769 aa11.22□□□□□ -0.61
PTCD1-205ENST00000485746 MRPL2Q5T653 305 aaKnown RBP11.22□□□□□ -0.61
PTCD1-205ENST00000485746 VWA1Q6PCB0 445 aa11.22□□□□□ -0.61
PTCD1-205ENST00000485746 PLEKHM3Q6ZWE6 761 aa11.22□□□□□ -0.61
PTCD1-205ENST00000485746 BTLAQ7Z6A9 289 aa11.22□□□□□ -0.61
PTCD1-205ENST00000485746 ZNF440Q8IYI8 595 aa11.22□□□□□ -0.61
PTCD1-205ENST00000485746 BBS10Q8TAM1 723 aa11.22□□□□□ -0.61
PTCD1-205ENST00000485746 PHF3Q92576 2039 aaKnown RBP11.22□□□□□ -0.61
PTCD1-205ENST00000485746 STARD4Q96DR4 205 aa11.22□□□□□ -0.61
PTCD1-205ENST00000485746 GMPPAQ96IJ6 420 aaPredicted RBP11.22□□□□□ -0.61
PTCD1-205ENST00000485746 ADGRG7Q96K78 797 aa11.22□□□□□ -0.61
PTCD1-205ENST00000485746 SLC39A3Q9BRY0 314 aa11.22□□□□□ -0.61
PTCD1-205ENST00000485746 OPN3Q9H1Y3 402 aaPredicted RBP11.22□□□□□ -0.61
PTCD1-205ENST00000485746 EXOSC3Q9NQT5 275 aaKnown RBP11.22□□□□□ -0.61
PTCD1-205ENST00000485746 CTPS2Q9NRF8 586 aa11.22□□□□□ -0.61
PTCD1-205ENST00000485746 GLRX2Q9NS18 164 aa11.22□□□□□ -0.61
PTCD1-205ENST00000485746 MRGBPQ9NV56 204 aa11.22□□□□□ -0.61
PTCD1-205ENST00000485746 CRIM1Q9NZV1 1036 aa11.22□□□□□ -0.61
PTCD1-205ENST00000485746 SLAMF8Q9P0V8 285 aa11.22□□□□□ -0.61
PTCD1-205ENST00000485746 ZNF443Q9Y2A4 671 aaPredicted RBP11.22□□□□□ -0.61
PTCD1-205ENST00000485746 SETXQ7Z333 2677 aaKnown RBP11.22□□□□□ -0.61
PTCD1-205ENST00000485746 FREM3P0C091 2139 aa11.21□□□□□ -0.61
PTCD1-205ENST00000485746 A8MXE2 369 aa11.21□□□□□ -0.61
PTCD1-205ENST00000485746 CASKO14936 926 aa11.21□□□□□ -0.61
PTCD1-205ENST00000485746 EFNA2O43921 213 aa11.21□□□□□ -0.61
PTCD1-205ENST00000485746 BCAS1O75363 584 aaPredicted RBP11.21□□□□□ -0.61
PTCD1-205ENST00000485746 TNFSF13O75888 250 aa11.21□□□□□ -0.61
PTCD1-205ENST00000485746 NTN1O95631 604 aa11.21□□□□□ -0.61
PTCD1-205ENST00000485746 NUDT7P0C024 238 aa11.21□□□□□ -0.61
PTCD1-205ENST00000485746 KIR2DL2P43627 348 aaPredicted RBP11.21□□□□□ -0.61
PTCD1-205ENST00000485746 HTR3AP46098 478 aa11.21□□□□□ -0.61
PTCD1-205ENST00000485746 COPZ1P61923 177 aa11.21□□□□□ -0.61
PTCD1-205ENST00000485746 NFYCQ13952 458 aa11.21□□□□□ -0.61
PTCD1-205ENST00000485746 ZSWIM7Q19AV6 140 aa11.21□□□□□ -0.61
PTCD1-205ENST00000485746 EXOC3L2Q2M3D2 409 aa11.21□□□□□ -0.61
PTCD1-205ENST00000485746 ZNF311Q5JNZ3 666 aa11.21□□□□□ -0.61
PTCD1-205ENST00000485746 TMEM201Q5SNT2 666 aa11.21□□□□□ -0.61
PTCD1-205ENST00000485746 AP1ARQ63HQ0 302 aa11.21□□□□□ -0.61
PTCD1-205ENST00000485746 ZNF836Q6ZNA1 936 aa11.21□□□□□ -0.61
PTCD1-205ENST00000485746 FCRLAQ7L513 359 aa11.21□□□□□ -0.61
PTCD1-205ENST00000485746 FAM214BQ7L5A3 538 aa11.21□□□□□ -0.61
PTCD1-205ENST00000485746 ZNF550Q7Z398 422 aa11.21□□□□□ -0.61
PTCD1-205ENST00000485746 GRINAQ7Z429 371 aa11.21□□□□□ -0.61
PTCD1-205ENST00000485746 DHDDSQ86SQ9 333 aa11.21□□□□□ -0.61
PTCD1-205ENST00000485746 KRT73Q86Y46 540 aa11.21□□□□□ -0.61
PTCD1-205ENST00000485746 CADM2Q8N3J6 435 aa11.21□□□□□ -0.61
PTCD1-205ENST00000485746 ACBD4Q8NC06 268 aa11.21□□□□□ -0.61
PTCD1-205ENST00000485746 FAM71CQ8NEG0 241 aa11.21□□□□□ -0.61
PTCD1-205ENST00000485746 NFKBIDQ8NI38 313 aa11.21□□□□□ -0.61
PTCD1-205ENST00000485746 LINC01560Q8TB33 94 aa11.21□□□□□ -0.61
PTCD1-205ENST00000485746 FAM222BQ8WU58 562 aa11.21□□□□□ -0.61
PTCD1-205ENST00000485746 MAL2Q969L2 176 aa11.21□□□□□ -0.61
PTCD1-205ENST00000485746 TREX2Q9BQ50 279 aaPredicted RBP11.21□□□□□ -0.61
PTCD1-205ENST00000485746 MCCC2Q9HCC0 563 aa11.21□□□□□ -0.61
PTCD1-205ENST00000485746 A4GALTQ9NPC4 353 aa11.21□□□□□ -0.61
PTCD1-205ENST00000485746 FANCFQ9NPI8 374 aa11.21□□□□□ -0.61
PTCD1-205ENST00000485746 DNAJB12Q9NXW2 375 aaKnown RBP11.21□□□□□ -0.61
PTCD1-205ENST00000485746 GALNT8Q9NY28 637 aa11.21□□□□□ -0.61
PTCD1-205ENST00000485746 SLC25A37Q9NYZ2 338 aa11.21□□□□□ -0.61
PTCD1-205ENST00000485746 JKAMPQ9P055 326 aa11.21□□□□□ -0.61
PTCD1-205ENST00000485746 VAPAQ9P0L0 249 aa11.21□□□□□ -0.61
PTCD1-205ENST00000485746 NDRG3Q9UGV2 375 aa11.21□□□□□ -0.61
PTCD1-205ENST00000485746 SPTBN1Q01082 2364 aaKnown RBP11.21□□□□□ -0.62
PTCD1-205ENST00000485746 SULT2B1O00204 365 aa11.2□□□□□ -0.62
PTCD1-205ENST00000485746 AP3D1O14617 1153 aa11.2□□□□□ -0.62
PTCD1-205ENST00000485746 PRKD3O94806 890 aa11.2□□□□□ -0.62
PTCD1-205ENST00000485746 GKN3PP0CG01 181 aa11.2□□□□□ -0.62
PTCD1-205ENST00000485746 POU2F1P14859 743 aa11.2□□□□□ -0.62
PTCD1-205ENST00000485746 RPS4Y1P22090 263 aaKnown RBP11.2□□□□□ -0.62
PTCD1-205ENST00000485746 ENPP1P22413 925 aa11.2□□□□□ -0.62
PTCD1-205ENST00000485746 SLC6A2P23975 617 aa11.2□□□□□ -0.62
PTCD1-205ENST00000485746 CXCR1P25024 350 aa11.2□□□□□ -0.62
PTCD1-205ENST00000485746 FKBP2P26885 142 aaKnown RBP11.2□□□□□ -0.62
PTCD1-205ENST00000485746 MDH1P40925 334 aaKnown RBP11.2□□□□□ -0.62
PTCD1-205ENST00000485746 POLR2HP52434 150 aaKnown RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms