RNA–Protein interactions for RNA: ENST00000485591.1

COL6A2-208, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 3

Gene COL6A2, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-208ENST00000485591 GRINAQ7Z429 371 aa18■□□□□ 0.47
COL6A2-208ENST00000485591 FAM57AQ8TBR7 257 aa18■□□□□ 0.47
COL6A2-208ENST00000485591 PROX1Q92786 737 aa18■□□□□ 0.47
COL6A2-208ENST00000485591 TIMP4Q99727 224 aa18■□□□□ 0.47
COL6A2-208ENST00000485591 MUC13Q9H3R2 512 aa18■□□□□ 0.47
COL6A2-208ENST00000485591 TNFRSF10DQ9UBN6 386 aa18■□□□□ 0.47
COL6A2-208ENST00000485591 ZNF337Q9Y3M9 751 aa18■□□□□ 0.47
COL6A2-208ENST00000485591 MED12Q93074 2177 aa17.99■□□□□ 0.47
COL6A2-208ENST00000485591 M0R3H8 397 aa17.99■□□□□ 0.47
COL6A2-208ENST00000485591 DNAJC8O75937 253 aaPredicted RBP17.99■□□□□ 0.47
COL6A2-208ENST00000485591 WISP1O95388 367 aa17.99■□□□□ 0.47
COL6A2-208ENST00000485591 SERPINA1P01009 418 aa17.99■□□□□ 0.47
COL6A2-208ENST00000485591 SLC1A3P43003 542 aa17.99■□□□□ 0.47
COL6A2-208ENST00000485591 LHX2P50458 406 aa17.99■□□□□ 0.47
COL6A2-208ENST00000485591 COPZ1P61923 177 aa17.99■□□□□ 0.47
COL6A2-208ENST00000485591 WLSQ5T9L3 541 aa17.99■□□□□ 0.47
COL6A2-208ENST00000485591 WBP2NLQ6ICG8 309 aa17.99■□□□□ 0.47
COL6A2-208ENST00000485591 CCDC121Q6ZUS5 278 aa17.99■□□□□ 0.47
COL6A2-208ENST00000485591 PLEKHM3Q6ZWE6 761 aa17.99■□□□□ 0.47
COL6A2-208ENST00000485591 RANBP3LQ86VV4 465 aaPredicted RBP17.99■□□□□ 0.47
COL6A2-208ENST00000485591 LZICQ8WZA0 190 aa17.99■□□□□ 0.47
COL6A2-208ENST00000485591 WFDC6Q9BQY6 131 aa17.99■□□□□ 0.47
COL6A2-208ENST00000485591 PRDM14Q9GZV8 571 aa17.99■□□□□ 0.47
COL6A2-208ENST00000485591 PCDHAC1Q9H158 963 aa17.99■□□□□ 0.47
COL6A2-208ENST00000485591 RPS6KA6Q9UK32 745 aa17.99■□□□□ 0.47
COL6A2-208ENST00000485591 SLC9A8Q9Y2E8 581 aa17.99■□□□□ 0.47
COL6A2-208ENST00000485591 AP4B1Q9Y6B7 739 aa17.99■□□□□ 0.47
COL6A2-208ENST00000485591 H3BML4 177 aa17.98■□□□□ 0.47
COL6A2-208ENST00000485591 ZNF682O95780 498 aa17.98■□□□□ 0.47
COL6A2-208ENST00000485591 TPOP07202 933 aa17.98■□□□□ 0.47
COL6A2-208ENST00000485591 PEPDP12955 493 aa17.98■□□□□ 0.47
COL6A2-208ENST00000485591 PLA2G2AP14555 144 aa17.98■□□□□ 0.47
COL6A2-208ENST00000485591 CPN1P15169 458 aa17.98■□□□□ 0.47
COL6A2-208ENST00000485591 ZNF708P17019 499 aa17.98■□□□□ 0.47
COL6A2-208ENST00000485591 POU3F2P20265 443 aaPredicted RBP17.98■□□□□ 0.47
COL6A2-208ENST00000485591 GNLYP22749 145 aa17.98■□□□□ 0.47
COL6A2-208ENST00000485591 APOBEC1P41238 236 aaKnown RBP17.98■□□□□ 0.47
COL6A2-208ENST00000485591 HTR3AP46098 478 aa17.98■□□□□ 0.47
COL6A2-208ENST00000485591 UQCRFS1P47985 274 aa17.98■□□□□ 0.47
COL6A2-208ENST00000485591 CLDN18P56856 261 aa17.98■□□□□ 0.47
COL6A2-208ENST00000485591 NCALDP61601 193 aa17.98■□□□□ 0.47
COL6A2-208ENST00000485591 HOXC5Q00444 222 aa17.98■□□□□ 0.47
COL6A2-208ENST00000485591 SELENBP1Q13228 472 aa17.98■□□□□ 0.47
COL6A2-208ENST00000485591 BCL2A1Q16548 175 aa17.98■□□□□ 0.47
COL6A2-208ENST00000485591 CD163Q86VB7 1156 aa17.98■□□□□ 0.47
COL6A2-208ENST00000485591 LACC1Q8IV20 430 aa17.98■□□□□ 0.47
COL6A2-208ENST00000485591 PM20D2Q8IYS1 436 aa17.98■□□□□ 0.47
COL6A2-208ENST00000485591 EID3Q8N140 333 aa17.98■□□□□ 0.47
COL6A2-208ENST00000485591 LSMEM1Q8N8F7 131 aa17.98■□□□□ 0.47
COL6A2-208ENST00000485591 OR52E4Q8NGH9 312 aa17.98■□□□□ 0.47
COL6A2-208ENST00000485591 OR4D11Q8NGI4 311 aa17.98■□□□□ 0.47
COL6A2-208ENST00000485591 WDYHV1Q96HA8 205 aa17.98■□□□□ 0.47
COL6A2-208ENST00000485591 TPD52L3Q96J77 140 aa17.98■□□□□ 0.47
COL6A2-208ENST00000485591 CLPTM1LQ96KA5 538 aa17.98■□□□□ 0.47
COL6A2-208ENST00000485591 ZNF559Q9BR84 538 aa17.98■□□□□ 0.47
COL6A2-208ENST00000485591 LRMDAQ9H2I8 198 aa17.98■□□□□ 0.47
COL6A2-208ENST00000485591 DCAF13Q9NV06 445 aaKnown RBP17.98■□□□□ 0.47
COL6A2-208ENST00000485591 ACTR3BQ9P1U1 418 aa17.98■□□□□ 0.47
COL6A2-208ENST00000485591 ACAD8Q9UKU7 415 aa17.98■□□□□ 0.47
COL6A2-208ENST00000485591 ZNF462Q96JM2 2506 aa17.98■□□□□ 0.47
COL6A2-208ENST00000485591 PRRG2O14669 202 aa17.97■□□□□ 0.47
COL6A2-208ENST00000485591 GSC2O15499 205 aa17.97■□□□□ 0.47
COL6A2-208ENST00000485591 FMO6PO60774 539 aa17.97■□□□□ 0.47
COL6A2-208ENST00000485591 HTR2AP28223 471 aa17.97■□□□□ 0.47
COL6A2-208ENST00000485591 STARP49675 285 aa17.97■□□□□ 0.47
COL6A2-208ENST00000485591 RAC1P63000 192 aa17.97■□□□□ 0.47
COL6A2-208ENST00000485591 GABPB1Q06547 395 aaPredicted RBP17.97■□□□□ 0.47
COL6A2-208ENST00000485591 MERTKQ12866 999 aa17.97■□□□□ 0.47
COL6A2-208ENST00000485591 TRIM25Q14258 630 aaKnown RBP17.97■□□□□ 0.47
COL6A2-208ENST00000485591 NPTX1Q15818 432 aa17.97■□□□□ 0.47
COL6A2-208ENST00000485591 PGM2L1Q6PCE3 622 aa17.97■□□□□ 0.47
COL6A2-208ENST00000485591 CARM1Q86X55 608 aa17.97■□□□□ 0.47
COL6A2-208ENST00000485591 CADM2Q8N3J6 435 aa17.97■□□□□ 0.47
COL6A2-208ENST00000485591 OR6T1Q8NGN1 323 aa17.97■□□□□ 0.47
COL6A2-208ENST00000485591 VANGL1Q8TAA9 524 aaPredicted RBP17.97■□□□□ 0.47
COL6A2-208ENST00000485591 ASB9Q96DX5 294 aa17.97■□□□□ 0.47
COL6A2-208ENST00000485591 NSMCE2Q96MF7 247 aa17.97■□□□□ 0.47
COL6A2-208ENST00000485591 CADM1Q9BY67 442 aaKnown RBP17.97■□□□□ 0.47
COL6A2-208ENST00000485591 TRIM2Q9C040 744 aa17.97■□□□□ 0.47
COL6A2-208ENST00000485591 ADAM19Q9H013 955 aa17.97■□□□□ 0.47
COL6A2-208ENST00000485591 PNPLA3Q9NST1 481 aa17.97■□□□□ 0.47
COL6A2-208ENST00000485591 STOML1Q9UBI4 398 aa17.97■□□□□ 0.47
COL6A2-208ENST00000485591 SAMD4AQ9UPU9 718 aaKnown RBP17.97■□□□□ 0.47
COL6A2-208ENST00000485591 SH3GLB1Q9Y371 365 aa17.97■□□□□ 0.47
COL6A2-208ENST00000485591 PRRC2CQ9Y520 2896 aaKnown RBP17.96■□□□□ 0.47
COL6A2-208ENST00000485591 EFNA2O43921 213 aa17.96■□□□□ 0.47
COL6A2-208ENST00000485591 TPST2O60704 377 aa17.96■□□□□ 0.47
COL6A2-208ENST00000485591 STSP08842 583 aa17.96■□□□□ 0.47
COL6A2-208ENST00000485591 TNFRSF1BP20333 461 aa17.96■□□□□ 0.47
COL6A2-208ENST00000485591 IL11P20809 199 aa17.96■□□□□ 0.47
COL6A2-208ENST00000485591 TACR3P29371 465 aa17.96■□□□□ 0.47
COL6A2-208ENST00000485591 POLR2HP52434 150 aaKnown RBP17.96■□□□□ 0.47
COL6A2-208ENST00000485591 GXYLT1Q4G148 440 aa17.96■□□□□ 0.47
COL6A2-208ENST00000485591 EMC4Q5J8M3 183 aa17.96■□□□□ 0.47
COL6A2-208ENST00000485591 C3orf33Q6P1S2 294 aa17.96■□□□□ 0.47
COL6A2-208ENST00000485591 VTCN1Q7Z7D3 282 aa17.96■□□□□ 0.47
COL6A2-208ENST00000485591 OR5M9Q8NGP3 310 aa17.96■□□□□ 0.47
COL6A2-208ENST00000485591 OR10Q1Q8NGQ4 319 aa17.96■□□□□ 0.47
COL6A2-208ENST00000485591 CCDC124Q96CT7 223 aaKnown RBP17.96■□□□□ 0.47
COL6A2-208ENST00000485591 HSH2DQ96JZ2 352 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms