RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 FAM199XQ6PEV8 388 aaPredicted RBP3.61□□□□□ -1.83
VPS13A-211ENST00000484581 TMEM107Q6UX40 140 aa3.61□□□□□ -1.83
VPS13A-211ENST00000484581 UTS2BQ765I0 119 aa3.61□□□□□ -1.83
VPS13A-211ENST00000484581 SLC47A2Q86VL8 602 aa3.61□□□□□ -1.83
VPS13A-211ENST00000484581 FGFRL1Q8N441 504 aa3.61□□□□□ -1.83
VPS13A-211ENST00000484581 ZNF248Q8NDW4 579 aa3.61□□□□□ -1.83
VPS13A-211ENST00000484581 MIPOL1Q8TD10 442 aa3.61□□□□□ -1.83
VPS13A-211ENST00000484581 MAGEE2Q8TD90 523 aaPredicted RBP3.61□□□□□ -1.83
VPS13A-211ENST00000484581 ADAMTS16Q8TE57 1224 aa3.61□□□□□ -1.83
VPS13A-211ENST00000484581 MRPS31Q92665 395 aaKnown RBP3.61□□□□□ -1.83
VPS13A-211ENST00000484581 TIMD4Q96H15 378 aa3.61□□□□□ -1.83
VPS13A-211ENST00000484581 RAB34Q9BZG1 259 aa3.61□□□□□ -1.83
VPS13A-211ENST00000484581 ZNF385DQ9H6B1 395 aa3.61□□□□□ -1.83
VPS13A-211ENST00000484581 POPDC2Q9HBU9 364 aa3.61□□□□□ -1.83
VPS13A-211ENST00000484581 KLHL28Q9NXS3 571 aa3.61□□□□□ -1.83
VPS13A-211ENST00000484581 ASIC3Q9UHC3 531 aa3.61□□□□□ -1.83
VPS13A-211ENST00000484581 IKZF2Q9UKS7 526 aa3.61□□□□□ -1.83
VPS13A-211ENST00000484581 KIAA1257Q9ULG3 409 aa3.61□□□□□ -1.83
VPS13A-211ENST00000484581 PRPF19Q9UMS4 504 aaKnown RBP3.61□□□□□ -1.83
VPS13A-211ENST00000484581 ABCG2Q9UNQ0 655 aa3.61□□□□□ -1.83
VPS13A-211ENST00000484581 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP3.61□□□□□ -1.83
VPS13A-211ENST00000484581 A0A1B0GTH9 108 aa3.6□□□□□ -1.83
VPS13A-211ENST00000484581 ZNF840PA6NDX5 716 aa3.6□□□□□ -1.83
VPS13A-211ENST00000484581 ZNF487B1APH4 448 aa3.6□□□□□ -1.83
VPS13A-211ENST00000484581 B4DXG7 233 aa3.6□□□□□ -1.83
VPS13A-211ENST00000484581 ARHGEF9O43307 516 aa3.6□□□□□ -1.83
VPS13A-211ENST00000484581 CXCL13O43927 109 aa3.6□□□□□ -1.83
VPS13A-211ENST00000484581 ATP5LO75964 103 aa3.6□□□□□ -1.83
VPS13A-211ENST00000484581 CST1P01037 141 aa3.6□□□□□ -1.83
VPS13A-211ENST00000484581 UMPSP11172 480 aa3.6□□□□□ -1.83
VPS13A-211ENST00000484581 GCFC2P16383 781 aaKnown RBP3.6□□□□□ -1.83
VPS13A-211ENST00000484581 BCL3P20749 454 aa3.6□□□□□ -1.83
VPS13A-211ENST00000484581 HMGB2P26583 209 aaKnown RBP3.6□□□□□ -1.83
VPS13A-211ENST00000484581 NMT1P30419 496 aaKnown RBP3.6□□□□□ -1.83
VPS13A-211ENST00000484581 CASP14P31944 242 aa3.6□□□□□ -1.83
VPS13A-211ENST00000484581 EFNA3P52797 238 aa3.6□□□□□ -1.83
VPS13A-211ENST00000484581 HSPA2P54652 639 aa3.6□□□□□ -1.83
VPS13A-211ENST00000484581 PLP1P60201 277 aa3.6□□□□□ -1.83
VPS13A-211ENST00000484581 ENPEPQ07075 957 aa3.6□□□□□ -1.83
VPS13A-211ENST00000484581 CUL1Q13616 776 aa3.6□□□□□ -1.83
VPS13A-211ENST00000484581 GK3PQ14409 553 aa3.6□□□□□ -1.83
VPS13A-211ENST00000484581 RAET1LQ5VY80 246 aa3.6□□□□□ -1.83
VPS13A-211ENST00000484581 ZNF613Q6PF04 617 aa3.6□□□□□ -1.83
VPS13A-211ENST00000484581 UQCC3Q6UW78 93 aa3.6□□□□□ -1.83
VPS13A-211ENST00000484581 ENPP6Q6UWR7 440 aa3.6□□□□□ -1.83
VPS13A-211ENST00000484581 BZW1Q7L1Q6 419 aaKnown RBP3.6□□□□□ -1.83
VPS13A-211ENST00000484581 PSTKQ8IV42 348 aaKnown RBP3.6□□□□□ -1.83
VPS13A-211ENST00000484581 OR2L13Q8N349 312 aa3.6□□□□□ -1.83
VPS13A-211ENST00000484581 CCDC148Q8NFR7 591 aa3.6□□□□□ -1.83
VPS13A-211ENST00000484581 SLC22A8Q8TCC7 542 aa3.6□□□□□ -1.83
VPS13A-211ENST00000484581 STARD8Q92502 1023 aa3.6□□□□□ -1.83
VPS13A-211ENST00000484581 UBE2E3Q969T4 207 aa3.6□□□□□ -1.83
VPS13A-211ENST00000484581 TM4SF19Q96DZ7 209 aa3.6□□□□□ -1.83
VPS13A-211ENST00000484581 CELF6Q96J87 481 aaKnown RBP3.6□□□□□ -1.83
VPS13A-211ENST00000484581 AGAP3Q96P47 875 aa3.6□□□□□ -1.83
VPS13A-211ENST00000484581 IL4I1Q96RQ9 567 aa3.6□□□□□ -1.83
VPS13A-211ENST00000484581 CLCC1Q96S66 551 aa3.6□□□□□ -1.83
VPS13A-211ENST00000484581 ZNF670Q9BS34 389 aa3.6□□□□□ -1.83
VPS13A-211ENST00000484581 MCRIP2Q9BUT9 160 aaKnown RBP3.6□□□□□ -1.83
VPS13A-211ENST00000484581 NAT10Q9H0A0 1025 aaKnown RBP3.6□□□□□ -1.83
VPS13A-211ENST00000484581 ZBP1Q9H171 429 aa3.6□□□□□ -1.83
VPS13A-211ENST00000484581 ANKRD19PQ9H560 264 aa3.6□□□□□ -1.83
VPS13A-211ENST00000484581 NARFLQ9H6Q4 476 aa3.6□□□□□ -1.83
VPS13A-211ENST00000484581 SMYD3Q9H7B4 428 aa3.6□□□□□ -1.83
VPS13A-211ENST00000484581 NT5MQ9NPB1 228 aa3.6□□□□□ -1.83
VPS13A-211ENST00000484581 TIGARQ9NQ88 270 aa3.6□□□□□ -1.83
VPS13A-211ENST00000484581 PNO1Q9NRX1 252 aaKnown RBP3.6□□□□□ -1.83
VPS13A-211ENST00000484581 SLC2A6Q9UGQ3 507 aa3.6□□□□□ -1.83
VPS13A-211ENST00000484581 L3MBTL1Q9Y468 752 aa3.6□□□□□ -1.83
VPS13A-211ENST00000484581 PEX16Q9Y5Y5 336 aa3.6□□□□□ -1.83
VPS13A-211ENST00000484581 TCF20Q9UGU0 1960 aaKnown RBP3.6□□□□□ -1.83
VPS13A-211ENST00000484581 IGHV3OR16-10A0A075B7F0 116 aa3.59□□□□□ -1.83
VPS13A-211ENST00000484581 RPL37AP8A6NKH3 93 aa3.59□□□□□ -1.83
VPS13A-211ENST00000484581 OR2AG2A6NM03 316 aa3.59□□□□□ -1.83
VPS13A-211ENST00000484581 KRTAP9-6A8MVA2 160 aa3.59□□□□□ -1.83
VPS13A-211ENST00000484581 EPM2AB3EWF7 344 aa3.59□□□□□ -1.83
VPS13A-211ENST00000484581 TRDCB7Z8K6 153 aa3.59□□□□□ -1.83
VPS13A-211ENST00000484581 FCN1O00602 326 aa3.59□□□□□ -1.83
VPS13A-211ENST00000484581 SLC17A2O00624 439 aa3.59□□□□□ -1.83
VPS13A-211ENST00000484581 ABCD4O14678 606 aa3.59□□□□□ -1.83
VPS13A-211ENST00000484581 RGS16O15492 202 aaPredicted RBP3.59□□□□□ -1.83
VPS13A-211ENST00000484581 PRKYO43930 277 aa3.59□□□□□ -1.83
VPS13A-211ENST00000484581 MELTFP08582 738 aa3.59□□□□□ -1.83
VPS13A-211ENST00000484581 TNNI1P19237 187 aa3.59□□□□□ -1.83
VPS13A-211ENST00000484581 GNA11P29992 359 aa3.59□□□□□ -1.83
VPS13A-211ENST00000484581 FGF9P31371 208 aaPredicted RBP3.59□□□□□ -1.83
VPS13A-211ENST00000484581 QARSP47897 775 aaKnown RBP3.59□□□□□ -1.83
VPS13A-211ENST00000484581 DAP3P51398 398 aaKnown RBP3.59□□□□□ -1.83
VPS13A-211ENST00000484581 PRKXP51817 358 aa3.59□□□□□ -1.83
VPS13A-211ENST00000484581 LIM2P55344 173 aa3.59□□□□□ -1.83
VPS13A-211ENST00000484581 SLC8A3P57103 927 aa3.59□□□□□ -1.83
VPS13A-211ENST00000484581 ERVK11-1P61568 191 aa3.59□□□□□ -1.83
VPS13A-211ENST00000484581 CDK16Q00536 496 aa3.59□□□□□ -1.83
VPS13A-211ENST00000484581 IL18Q14116 193 aa3.59□□□□□ -1.83
VPS13A-211ENST00000484581 KCNJ11Q14654 390 aa3.59□□□□□ -1.83
VPS13A-211ENST00000484581 ABRAXAS2Q15018 415 aa3.59□□□□□ -1.83
VPS13A-211ENST00000484581 CSNK1A1LQ8N752 337 aa3.59□□□□□ -1.83
VPS13A-211ENST00000484581 ATP6V0D2Q8N8Y2 350 aa3.59□□□□□ -1.83
VPS13A-211ENST00000484581 CATSPER1Q8NEC5 780 aa3.59□□□□□ -1.83
VPS13A-211ENST00000484581 OR2L3Q8NG85 312 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms