RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 DUSP19Q8WTR2 217 aa5.25□□□□□ -1.57
CSDE1-207ENST00000483407 TRMT61AQ96FX7 289 aaKnown RBP5.25□□□□□ -1.57
CSDE1-207ENST00000483407 GMPPAQ96IJ6 420 aaPredicted RBP5.25□□□□□ -1.57
CSDE1-207ENST00000483407 ZNF382Q96SR6 550 aa5.25□□□□□ -1.57
CSDE1-207ENST00000483407 C1QTNF3Q9BXJ4 246 aa5.25□□□□□ -1.57
CSDE1-207ENST00000483407 TBL1XR1Q9BZK7 514 aa5.25□□□□□ -1.57
CSDE1-207ENST00000483407 ACTR6Q9GZN1 396 aa5.25□□□□□ -1.57
CSDE1-207ENST00000483407 TSPYL1Q9H0U9 437 aa5.25□□□□□ -1.57
CSDE1-207ENST00000483407 C3orf14Q9HBI5 128 aa5.25□□□□□ -1.57
CSDE1-207ENST00000483407 BARX1Q9HBU1 254 aaPredicted RBP5.25□□□□□ -1.57
CSDE1-207ENST00000483407 MIEF1Q9NQG6 463 aa5.25□□□□□ -1.57
CSDE1-207ENST00000483407 PLSCR4Q9NRQ2 329 aa5.25□□□□□ -1.57
CSDE1-207ENST00000483407 GLRX2Q9NS18 164 aa5.25□□□□□ -1.57
CSDE1-207ENST00000483407 DDX18Q9NVP1 670 aaKnown RBP5.25□□□□□ -1.57
CSDE1-207ENST00000483407 FAM120CQ9NX05 1096 aaKnown RBP5.25□□□□□ -1.57
CSDE1-207ENST00000483407 MCTS1Q9ULC4 181 aaKnown RBP5.25□□□□□ -1.57
CSDE1-207ENST00000483407 GRID1Q9ULK0 1009 aa5.25□□□□□ -1.57
CSDE1-207ENST00000483407 GPR52Q9Y2T5 361 aa5.25□□□□□ -1.57
CSDE1-207ENST00000483407 SNX8Q9Y5X2 465 aa5.25□□□□□ -1.57
CSDE1-207ENST00000483407 ATRQ13535 2644 aa5.25□□□□□ -1.57
CSDE1-207ENST00000483407 KIAA1549Q9HCM3 1950 aa5.24□□□□□ -1.57
CSDE1-207ENST00000483407 JMJD1CQ15652 2540 aa5.24□□□□□ -1.57
CSDE1-207ENST00000483407 A0A087WZY1 265 aa5.24□□□□□ -1.57
CSDE1-207ENST00000483407 IGLV3-32A0A0A0MS00 114 aa5.24□□□□□ -1.57
CSDE1-207ENST00000483407 TTC36A6NLP5 189 aa5.24□□□□□ -1.57
CSDE1-207ENST00000483407 C17orf51A8MQB3 221 aa5.24□□□□□ -1.57
CSDE1-207ENST00000483407 B4DXG7 233 aa5.24□□□□□ -1.57
CSDE1-207ENST00000483407 SS18L1O75177 396 aaPredicted RBP5.24□□□□□ -1.57
CSDE1-207ENST00000483407 AQP8O94778 261 aa5.24□□□□□ -1.57
CSDE1-207ENST00000483407 ENO1P06733 434 aaKnown RBP5.24□□□□□ -1.57
CSDE1-207ENST00000483407 FESP07332 822 aa5.24□□□□□ -1.57
CSDE1-207ENST00000483407 ANXA4P09525 319 aaPredicted RBP5.24□□□□□ -1.57
CSDE1-207ENST00000483407 ZNF17P17021 662 aa5.24□□□□□ -1.57
CSDE1-207ENST00000483407 PI3P19957 117 aa5.24□□□□□ -1.57
CSDE1-207ENST00000483407 IL11P20809 199 aa5.24□□□□□ -1.57
CSDE1-207ENST00000483407 ME2P23368 584 aa5.24□□□□□ -1.57
CSDE1-207ENST00000483407 CASQ1P31415 396 aa5.24□□□□□ -1.57
CSDE1-207ENST00000483407 TIA1P31483 386 aaKnown RBP eCLIP5.24□□□□□ -1.57
CSDE1-207ENST00000483407 PRIM2P49643 509 aa5.24□□□□□ -1.57
CSDE1-207ENST00000483407 RAE1P78406 368 aaKnown RBP5.24□□□□□ -1.57
CSDE1-207ENST00000483407 HGFACQ04756 655 aa5.24□□□□□ -1.57
CSDE1-207ENST00000483407 BTKQ06187 659 aa5.24□□□□□ -1.57
CSDE1-207ENST00000483407 ZNF763Q0D2J5 394 aa5.24□□□□□ -1.57
CSDE1-207ENST00000483407 C2orf80Q0P641 193 aa5.24□□□□□ -1.57
CSDE1-207ENST00000483407 TNK1Q13470 666 aa5.24□□□□□ -1.57
CSDE1-207ENST00000483407 TRADDQ15628 312 aa5.24□□□□□ -1.57
CSDE1-207ENST00000483407 IMPG1Q17R60 797 aa5.24□□□□□ -1.57
CSDE1-207ENST00000483407 CLEC12BQ2HXU8 276 aa5.24□□□□□ -1.57
CSDE1-207ENST00000483407 VPS26BQ4G0F5 336 aa5.24□□□□□ -1.57
CSDE1-207ENST00000483407 SPDYAQ5MJ70 313 aa5.24□□□□□ -1.57
CSDE1-207ENST00000483407 TCHHL1Q5QJ38 904 aaPredicted RBP5.24□□□□□ -1.57
CSDE1-207ENST00000483407 ZNF678Q5SXM1 525 aa5.24□□□□□ -1.57
CSDE1-207ENST00000483407 HEPHL1Q6MZM0 1159 aa5.24□□□□□ -1.57
CSDE1-207ENST00000483407 C8orf74Q6P047 294 aa5.24□□□□□ -1.57
CSDE1-207ENST00000483407 PODNL1Q6PEZ8 512 aa5.24□□□□□ -1.57
CSDE1-207ENST00000483407 TMEM107Q6UX40 140 aa5.24□□□□□ -1.57
CSDE1-207ENST00000483407 STAC2Q6ZMT1 411 aa5.24□□□□□ -1.57
CSDE1-207ENST00000483407 ZNF572Q7Z3I7 529 aaPredicted RBP5.24□□□□□ -1.57
CSDE1-207ENST00000483407 MARCH3Q86UD3 253 aa5.24□□□□□ -1.57
CSDE1-207ENST00000483407 EXOC3L1Q86VI1 746 aa5.24□□□□□ -1.57
CSDE1-207ENST00000483407 FAM90A1Q86YD7 464 aa5.24□□□□□ -1.57
CSDE1-207ENST00000483407 MMGT1Q8N4V1 131 aa5.24□□□□□ -1.57
CSDE1-207ENST00000483407 STEAP2Q8NFT2 490 aa5.24□□□□□ -1.57
CSDE1-207ENST00000483407 CDC26Q8NHZ8 85 aa5.24□□□□□ -1.57
CSDE1-207ENST00000483407 AKAP1Q92667 903 aaKnown RBP eCLIP5.24□□□□□ -1.57
CSDE1-207ENST00000483407 ANP32BQ92688 251 aaKnown RBP5.24□□□□□ -1.57
CSDE1-207ENST00000483407 PAFAH2Q99487 392 aa5.24□□□□□ -1.57
CSDE1-207ENST00000483407 HDHD5Q9BXW7 423 aa5.24□□□□□ -1.57
CSDE1-207ENST00000483407 EBPLQ9BY08 206 aa5.24□□□□□ -1.57
CSDE1-207ENST00000483407 ACPTQ9BZG2 426 aa5.24□□□□□ -1.57
CSDE1-207ENST00000483407 IQCGQ9H095 443 aaKnown RBP5.24□□□□□ -1.57
CSDE1-207ENST00000483407 OR10A4Q9H209 315 aa5.24□□□□□ -1.57
CSDE1-207ENST00000483407 GRPEL1Q9HAV7 217 aa5.24□□□□□ -1.57
CSDE1-207ENST00000483407 NGBQ9NPG2 151 aa5.24□□□□□ -1.57
CSDE1-207ENST00000483407 NINJ2Q9NZG7 142 aa5.24□□□□□ -1.57
CSDE1-207ENST00000483407 ZNF225Q9UK10 706 aa5.24□□□□□ -1.57
CSDE1-207ENST00000483407 CLEC4AQ9UMR7 237 aa5.24□□□□□ -1.57
CSDE1-207ENST00000483407 C19orf53Q9UNZ5 99 aaPredicted RBP5.24□□□□□ -1.57
CSDE1-207ENST00000483407 LAMP3Q9UQV4 416 aa5.24□□□□□ -1.57
CSDE1-207ENST00000483407 VDAC3Q9Y277 283 aa5.24□□□□□ -1.57
CSDE1-207ENST00000483407 DOCK7Q96N67 2140 aa5.24□□□□□ -1.57
CSDE1-207ENST00000483407 HRNRQ86YZ3 2850 aaPredicted RBP5.23□□□□□ -1.57
CSDE1-207ENST00000483407 CSPG4Q6UVK1 2322 aa5.23□□□□□ -1.57
CSDE1-207ENST00000483407 A0A1W2PPL8 197 aa5.23□□□□□ -1.57
CSDE1-207ENST00000483407 MYO1GB0I1T2 1018 aa5.23□□□□□ -1.57
CSDE1-207ENST00000483407 TRIM49D1C9J1S8 452 aa5.23□□□□□ -1.57
CSDE1-207ENST00000483407 POC1B-GALNT4F8VUJ3 575 aa5.23□□□□□ -1.57
CSDE1-207ENST00000483407 UPK1AO00322 258 aa5.23□□□□□ -1.57
CSDE1-207ENST00000483407 TLX2O43763 284 aaPredicted RBP5.23□□□□□ -1.57
CSDE1-207ENST00000483407 CXCL13O43927 109 aa5.23□□□□□ -1.57
CSDE1-207ENST00000483407 GMFGO60234 142 aa5.23□□□□□ -1.57
CSDE1-207ENST00000483407 UTS2O95399 124 aa5.23□□□□□ -1.57
CSDE1-207ENST00000483407 ANGPTL1O95841 491 aa5.23□□□□□ -1.57
CSDE1-207ENST00000483407 PLAUP00749 431 aa5.23□□□□□ -1.57
CSDE1-207ENST00000483407 TUBBP07437 444 aa5.23□□□□□ -1.57
CSDE1-207ENST00000483407 SNRPAP09012 282 aaKnown RBP5.23□□□□□ -1.57
CSDE1-207ENST00000483407 PABPC4LP0CB38 370 aaKnown RBP5.23□□□□□ -1.57
CSDE1-207ENST00000483407 CTAGE8P0CG41 777 aa5.23□□□□□ -1.57
CSDE1-207ENST00000483407 HPGDP15428 266 aa5.23□□□□□ -1.57
CSDE1-207ENST00000483407 CHN1P15882 459 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms