RNA–Protein interactions for RNA: ENST00000483275.1

VARS-226, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-226ENST00000483275 C3orf30Q96M34 536 aa12.29□□□□□ -0.44
VARS-226ENST00000483275 ACTRT3Q9BYD9 372 aa12.29□□□□□ -0.44
VARS-226ENST00000483275 ALG2Q9H553 416 aa12.29□□□□□ -0.44
VARS-226ENST00000483275 BCO1Q9HAY6 547 aa12.29□□□□□ -0.44
VARS-226ENST00000483275 HHATLQ9HCP6 504 aa12.29□□□□□ -0.44
VARS-226ENST00000483275 KLHL9Q9P2J3 617 aa12.29□□□□□ -0.44
VARS-226ENST00000483275 FAF1Q9UNN5 650 aaPredicted RBP12.29□□□□□ -0.44
VARS-226ENST00000483275 B3GALT5Q9Y2C3 310 aa12.29□□□□□ -0.44
VARS-226ENST00000483275 DTNAQ9Y4J8 743 aa12.29□□□□□ -0.44
VARS-226ENST00000483275 H3BNH8 94 aa12.28□□□□□ -0.44
VARS-226ENST00000483275 CHEK2O96017 543 aa12.28□□□□□ -0.44
VARS-226ENST00000483275 ARRB2P32121 409 aa12.28□□□□□ -0.44
VARS-226ENST00000483275 ZNF83P51522 516 aa12.28□□□□□ -0.44
VARS-226ENST00000483275 NUDT6P53370 316 aa12.28□□□□□ -0.44
VARS-226ENST00000483275 ATP12AP54707 1039 aa12.28□□□□□ -0.44
VARS-226ENST00000483275 SUMO3P55854 103 aaPredicted RBP12.28□□□□□ -0.44
VARS-226ENST00000483275 CHRNEQ04844 493 aa12.28□□□□□ -0.44
VARS-226ENST00000483275 SKP2Q13309 424 aa12.28□□□□□ -0.44
VARS-226ENST00000483275 GPR68Q15743 365 aa12.28□□□□□ -0.44
VARS-226ENST00000483275 UGT3A2Q3SY77 523 aa12.28□□□□□ -0.44
VARS-226ENST00000483275 TIGD2Q4W5G0 525 aa12.28□□□□□ -0.44
VARS-226ENST00000483275 B3GLCTQ6Y288 498 aa12.28□□□□□ -0.44
VARS-226ENST00000483275 R3HCC1LQ7Z5L2 792 aaKnown RBP12.28□□□□□ -0.44
VARS-226ENST00000483275 DTX2Q86UW9 622 aa12.28□□□□□ -0.44
VARS-226ENST00000483275 HIPK1Q86Z02 1210 aa12.28□□□□□ -0.44
VARS-226ENST00000483275 PIAS4Q8N2W9 510 aaPredicted RBP12.28□□□□□ -0.44
VARS-226ENST00000483275 OR56A1Q8NGH5 318 aa12.28□□□□□ -0.44
VARS-226ENST00000483275 OR52N5Q8NH56 324 aa12.28□□□□□ -0.44
VARS-226ENST00000483275 OR5W2Q8NH69 310 aa12.28□□□□□ -0.44
VARS-226ENST00000483275 NANOS1Q8WY41 292 aaKnown RBP12.28□□□□□ -0.44
VARS-226ENST00000483275 MTERF3Q96E29 417 aa12.28□□□□□ -0.44
VARS-226ENST00000483275 MRGPRX4Q96LA9 322 aa12.28□□□□□ -0.44
VARS-226ENST00000483275 OR7D2Q96RA2 312 aa12.28□□□□□ -0.44
VARS-226ENST00000483275 THUMPD3Q9BV44 507 aaKnown RBP12.28□□□□□ -0.44
VARS-226ENST00000483275 CACNG6Q9BXT2 260 aa12.28□□□□□ -0.44
VARS-226ENST00000483275 MANSC1Q9H8J5 431 aa12.28□□□□□ -0.44
VARS-226ENST00000483275 PPCSQ9HAB8 311 aa12.28□□□□□ -0.44
VARS-226ENST00000483275 KCNE5Q9UJ90 142 aa12.28□□□□□ -0.44
VARS-226ENST00000483275 ACTL7BQ9Y614 415 aa12.28□□□□□ -0.44
VARS-226ENST00000483275 SVEP1Q4LDE5 3571 aa12.28□□□□□ -0.44
VARS-226ENST00000483275 A0A096LNT2 108 aa12.27□□□□□ -0.45
VARS-226ENST00000483275 FAM234BA2RU67 622 aa12.27□□□□□ -0.45
VARS-226ENST00000483275 A8MV72 311 aaPredicted RBP12.27□□□□□ -0.45
VARS-226ENST00000483275 CFLARO15519 480 aa12.27□□□□□ -0.45
VARS-226ENST00000483275 ZNF264O43296 627 aa12.27□□□□□ -0.45
VARS-226ENST00000483275 CYTIPO60759 359 aa12.27□□□□□ -0.45
VARS-226ENST00000483275 LY6HO94772 140 aa12.27□□□□□ -0.45
VARS-226ENST00000483275 HSPA4LO95757 839 aa12.27□□□□□ -0.45
VARS-226ENST00000483275 UBTFL6P0CB48 400 aaPredicted RBP12.27□□□□□ -0.45
VARS-226ENST00000483275 COX5AP20674 150 aa12.27□□□□□ -0.45
VARS-226ENST00000483275 ALDH3A1P30838 453 aa12.27□□□□□ -0.45
VARS-226ENST00000483275 CCT5P48643 541 aa12.27□□□□□ -0.45
VARS-226ENST00000483275 FOXG1P55316 489 aaPredicted RBP12.27□□□□□ -0.45
VARS-226ENST00000483275 RAC3P60763 192 aa12.27□□□□□ -0.45
VARS-226ENST00000483275 NAA20P61599 178 aa12.27□□□□□ -0.45
VARS-226ENST00000483275 SRSF2Q01130 221 aaKnown RBP12.27□□□□□ -0.45
VARS-226ENST00000483275 MERTKQ12866 999 aa12.27□□□□□ -0.45
VARS-226ENST00000483275 MLC1Q15049 377 aa12.27□□□□□ -0.45
VARS-226ENST00000483275 ARL13AQ5H913 290 aaPredicted RBP12.27□□□□□ -0.45
VARS-226ENST00000483275 C9orf135Q5VTT2 229 aa12.27□□□□□ -0.45
VARS-226ENST00000483275 C3orf33Q6P1S2 294 aa12.27□□□□□ -0.45
VARS-226ENST00000483275 ZNF100Q8IYN0 542 aa12.27□□□□□ -0.45
VARS-226ENST00000483275 CLECL1Q8IZS7 167 aa12.27□□□□□ -0.45
VARS-226ENST00000483275 UBE2J2Q8N2K1 259 aa12.27□□□□□ -0.45
VARS-226ENST00000483275 SLC43A2Q8N370 569 aa12.27□□□□□ -0.45
VARS-226ENST00000483275 ZNF525Q8N782 197 aa12.27□□□□□ -0.45
VARS-226ENST00000483275 ZNF433Q8N7K0 673 aaPredicted RBP12.27□□□□□ -0.45
VARS-226ENST00000483275 TOR1AIP2Q8NFQ8 470 aa12.27□□□□□ -0.45
VARS-226ENST00000483275 OR5P2Q8WZ92 322 aa12.27□□□□□ -0.45
VARS-226ENST00000483275 C1QTNF6Q9BXI9 259 aa12.27□□□□□ -0.45
VARS-226ENST00000483275 GP6Q9HCN6 339 aa12.27□□□□□ -0.45
VARS-226ENST00000483275 SLC17A7Q9P2U7 560 aa12.27□□□□□ -0.45
VARS-226ENST00000483275 TMED5Q9Y3A6 229 aa12.27□□□□□ -0.45
VARS-226ENST00000483275 TRAF6Q9Y4K3 522 aa12.27□□□□□ -0.45
VARS-226ENST00000483275 ARFGEF3Q5TH69 2177 aa12.26□□□□□ -0.45
VARS-226ENST00000483275 SERINC4A6NH21 518 aa12.26□□□□□ -0.45
VARS-226ENST00000483275 E7EQL1 145 aa12.26□□□□□ -0.45
VARS-226ENST00000483275 PHF1O43189 567 aaPredicted RBP12.26□□□□□ -0.45
VARS-226ENST00000483275 TLX2O43763 284 aaPredicted RBP12.26□□□□□ -0.45
VARS-226ENST00000483275 FCMRO60667 390 aa12.26□□□□□ -0.45
VARS-226ENST00000483275 TRIM13O60858 407 aa12.26□□□□□ -0.45
VARS-226ENST00000483275 TFPIP10646 304 aa12.26□□□□□ -0.45
VARS-226ENST00000483275 GGT1P19440 569 aa12.26□□□□□ -0.45
VARS-226ENST00000483275 DIO1P49895 249 aa12.26□□□□□ -0.45
VARS-226ENST00000483275 SESN3P58005 492 aa12.26□□□□□ -0.45
VARS-226ENST00000483275 HBA1P69905 142 aa12.26□□□□□ -0.45
VARS-226ENST00000483275 CBFBQ13951 182 aa12.26□□□□□ -0.45
VARS-226ENST00000483275 PGS1Q32NB8 556 aa12.26□□□□□ -0.45
VARS-226ENST00000483275 CHRFAM7AQ494W8 412 aa12.26□□□□□ -0.45
VARS-226ENST00000483275 XKR7Q5GH72 579 aa12.26□□□□□ -0.45
VARS-226ENST00000483275 SLC25A53Q5H9E4 307 aa12.26□□□□□ -0.45
VARS-226ENST00000483275 C6orf52Q5T4I8 152 aa12.26□□□□□ -0.45
VARS-226ENST00000483275 IL23RQ5VWK5 629 aa12.26□□□□□ -0.45
VARS-226ENST00000483275 ABLIM2Q6H8Q1 611 aa12.26□□□□□ -0.45
VARS-226ENST00000483275 C11orf71Q6IPW1 123 aa12.26□□□□□ -0.45
VARS-226ENST00000483275 RNF165Q6ZSG1 346 aa12.26□□□□□ -0.45
VARS-226ENST00000483275 SFXN5Q8TD22 340 aa12.26□□□□□ -0.45
VARS-226ENST00000483275 MUCL1Q96DR8 90 aa12.26□□□□□ -0.45
VARS-226ENST00000483275 SDF2Q99470 211 aa12.26□□□□□ -0.45
VARS-226ENST00000483275 HOXD1Q9GZZ0 328 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms