RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 DPM1O60762 260 aa5.68□□□□□ -1.5
SF3B1-209ENST00000479532 ERN1O75460 977 aaKnown RBP5.68□□□□□ -1.5
SF3B1-209ENST00000479532 ITGA10O75578 1167 aa5.68□□□□□ -1.5
SF3B1-209ENST00000479532 CEACAM4O75871 244 aa5.68□□□□□ -1.5
SF3B1-209ENST00000479532 H6PDO95479 791 aa5.68□□□□□ -1.5
SF3B1-209ENST00000479532 S100A6P06703 90 aa5.68□□□□□ -1.5
SF3B1-209ENST00000479532 CELA2AP08217 269 aa5.68□□□□□ -1.5
SF3B1-209ENST00000479532 EFNA1P20827 205 aaPredicted RBP5.68□□□□□ -1.5
SF3B1-209ENST00000479532 DRD5P21918 477 aa5.68□□□□□ -1.5
SF3B1-209ENST00000479532 MATN1P21941 496 aa5.68□□□□□ -1.5
SF3B1-209ENST00000479532 PCSK6P29122 969 aa5.68□□□□□ -1.5
SF3B1-209ENST00000479532 IL12AP29459 219 aa5.68□□□□□ -1.5
SF3B1-209ENST00000479532 IL12BP29460 328 aa5.68□□□□□ -1.5
SF3B1-209ENST00000479532 IDUAP35475 653 aa5.68□□□□□ -1.5
SF3B1-209ENST00000479532 PPICP45877 212 aa5.68□□□□□ -1.5
SF3B1-209ENST00000479532 LIMS1P48059 325 aa5.68□□□□□ -1.5
SF3B1-209ENST00000479532 ENTPD1P49961 510 aa5.68□□□□□ -1.5
SF3B1-209ENST00000479532 NR0B1P51843 470 aaKnown RBP5.68□□□□□ -1.5
SF3B1-209ENST00000479532 AP2S1P53680 142 aaPredicted RBP5.68□□□□□ -1.5
SF3B1-209ENST00000479532 TMBIM6P55061 237 aa5.68□□□□□ -1.5
SF3B1-209ENST00000479532 MLF1P58340 268 aa5.68□□□□□ -1.5
SF3B1-209ENST00000479532 DSTNP60981 165 aa5.68□□□□□ -1.5
SF3B1-209ENST00000479532 HBA1P69905 142 aa5.68□□□□□ -1.5
SF3B1-209ENST00000479532 OC90Q02509 493 aaPredicted RBP5.68□□□□□ -1.5
SF3B1-209ENST00000479532 DUSP2Q05923 314 aa5.68□□□□□ -1.5
SF3B1-209ENST00000479532 Q0VFX4 171 aa5.68□□□□□ -1.5
SF3B1-209ENST00000479532 MALLQ13021 153 aa5.68□□□□□ -1.5
SF3B1-209ENST00000479532 KLF10Q13118 480 aa5.68□□□□□ -1.5
SF3B1-209ENST00000479532 MFAP5Q13361 173 aa5.68□□□□□ -1.5
SF3B1-209ENST00000479532 RAPSNQ13702 412 aa5.68□□□□□ -1.5
SF3B1-209ENST00000479532 EBPQ15125 230 aaKnown RBP5.68□□□□□ -1.5
SF3B1-209ENST00000479532 MPEG1Q2M385 716 aa5.68□□□□□ -1.5
SF3B1-209ENST00000479532 TRIM16LQ309B1 348 aa5.68□□□□□ -1.5
SF3B1-209ENST00000479532 ACER2Q5QJU3 275 aa5.68□□□□□ -1.5
SF3B1-209ENST00000479532 C6orf183Q5T699 404 aa5.68□□□□□ -1.5
SF3B1-209ENST00000479532 FCRLBQ6BAA4 426 aa5.68□□□□□ -1.5
SF3B1-209ENST00000479532 TCTN3Q6NUS6 607 aa5.68□□□□□ -1.5
SF3B1-209ENST00000479532 H3F3CQ6NXT2 135 aa5.68□□□□□ -1.5
SF3B1-209ENST00000479532 OPN5Q6U736 354 aa5.68□□□□□ -1.5
SF3B1-209ENST00000479532 DGAT2L6Q6ZPD8 337 aa5.68□□□□□ -1.5
SF3B1-209ENST00000479532 LINC00696Q6ZRV3 163 aa5.68□□□□□ -1.5
SF3B1-209ENST00000479532 CXXC5Q7LFL8 322 aaKnown RBP5.68□□□□□ -1.5
SF3B1-209ENST00000479532 GPR141Q7Z602 305 aa5.68□□□□□ -1.5
SF3B1-209ENST00000479532 ANKRD46Q86W74 232 aa5.68□□□□□ -1.5
SF3B1-209ENST00000479532 CCDC28AQ8IWP9 274 aa5.68□□□□□ -1.5
SF3B1-209ENST00000479532 C9orf40Q8IXQ3 194 aa5.68□□□□□ -1.5
SF3B1-209ENST00000479532 CLECL1Q8IZS7 167 aa5.68□□□□□ -1.5
SF3B1-209ENST00000479532 LINC00469Q8N7U9 141 aa5.68□□□□□ -1.5
SF3B1-209ENST00000479532 ZNF321PQ8N8H1 164 aa5.68□□□□□ -1.5
SF3B1-209ENST00000479532 ZNF615Q8N8J6 731 aa5.68□□□□□ -1.5
SF3B1-209ENST00000479532 CDRT4Q8N9R6 151 aa5.68□□□□□ -1.5
SF3B1-209ENST00000479532 FAM98AQ8NCA5 519 aaKnown RBP5.68□□□□□ -1.5
SF3B1-209ENST00000479532 OR7G2Q8NG99 324 aa5.68□□□□□ -1.5
SF3B1-209ENST00000479532 OR9I1Q8NGQ6 314 aa5.68□□□□□ -1.5
SF3B1-209ENST00000479532 C16orf52Q8NHV5 167 aa5.68□□□□□ -1.5
SF3B1-209ENST00000479532 RP9Q8TA86 221 aaKnown RBP5.68□□□□□ -1.5
SF3B1-209ENST00000479532 PSMA8Q8TAA3 256 aa5.68□□□□□ -1.5
SF3B1-209ENST00000479532 ADAMTS15Q8TE58 950 aa5.68□□□□□ -1.5
SF3B1-209ENST00000479532 DOK4Q8TEW6 326 aa5.68□□□□□ -1.5
SF3B1-209ENST00000479532 SLC9A6Q92581 669 aa5.68□□□□□ -1.5
SF3B1-209ENST00000479532 TMEM125Q96AQ2 219 aa5.68□□□□□ -1.5
SF3B1-209ENST00000479532 VPS33AQ96AX1 596 aa5.68□□□□□ -1.5
SF3B1-209ENST00000479532 FAM120BQ96EK7 910 aaKnown RBP5.68□□□□□ -1.5
SF3B1-209ENST00000479532 WBP1Q96G27 269 aa5.68□□□□□ -1.5
SF3B1-209ENST00000479532 LCORQ96JN0 433 aaPredicted RBP5.68□□□□□ -1.5
SF3B1-209ENST00000479532 ZNF347Q96SE7 839 aa5.68□□□□□ -1.5
SF3B1-209ENST00000479532 MESP1Q9BRJ9 268 aa5.68□□□□□ -1.5
SF3B1-209ENST00000479532 UTP23Q9BRU9 249 aaKnown RBP5.68□□□□□ -1.5
SF3B1-209ENST00000479532 SLC35A5Q9BS91 424 aa5.68□□□□□ -1.5
SF3B1-209ENST00000479532 OSBPL11Q9BXB4 747 aa5.68□□□□□ -1.5
SF3B1-209ENST00000479532 ACTRT3Q9BYD9 372 aa5.68□□□□□ -1.5
SF3B1-209ENST00000479532 NMUR2Q9GZQ4 415 aa5.68□□□□□ -1.5
SF3B1-209ENST00000479532 ZNF385DQ9H6B1 395 aa5.68□□□□□ -1.5
SF3B1-209ENST00000479532 CACYBPQ9HB71 228 aaKnown RBP5.68□□□□□ -1.5
SF3B1-209ENST00000479532 FOLH1BQ9HBA9 442 aa5.68□□□□□ -1.5
SF3B1-209ENST00000479532 Q9N2J8 555 aa5.68□□□□□ -1.5
SF3B1-209ENST00000479532 GCM1Q9NP62 436 aa5.68□□□□□ -1.5
SF3B1-209ENST00000479532 SLAMF7Q9NQ25 335 aa5.68□□□□□ -1.5
SF3B1-209ENST00000479532 EQTNQ9NQ60 294 aa5.68□□□□□ -1.5
SF3B1-209ENST00000479532 HPF1Q9NWY4 346 aa5.68□□□□□ -1.5
SF3B1-209ENST00000479532 THUMPD1Q9NXG2 353 aaKnown RBP5.68□□□□□ -1.5
SF3B1-209ENST00000479532 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.68□□□□□ -1.5
SF3B1-209ENST00000479532 SLC7A8Q9UHI5 535 aa5.68□□□□□ -1.5
SF3B1-209ENST00000479532 ACAD8Q9UKU7 415 aa5.68□□□□□ -1.5
SF3B1-209ENST00000479532 DTNAQ9Y4J8 743 aa5.68□□□□□ -1.5
SF3B1-209ENST00000479532 HEMK1Q9Y5R4 338 aaPredicted RBP5.68□□□□□ -1.5
SF3B1-209ENST00000479532 CPAMD8Q8IZJ3 1885 aa5.68□□□□□ -1.5
SF3B1-209ENST00000479532 PCSK5Q92824 1860 aa5.67□□□□□ -1.5
SF3B1-209ENST00000479532 GIMAP1-GIMAP5A0A087WTJ2 511 aa5.67□□□□□ -1.5
SF3B1-209ENST00000479532 A0A096LPI6 279 aa5.67□□□□□ -1.5
SF3B1-209ENST00000479532 FRG2CA6NGY1 282 aa5.67□□□□□ -1.5
SF3B1-209ENST00000479532 SNTNA6NMZ2 147 aa5.67□□□□□ -1.5
SF3B1-209ENST00000479532 MASP2O00187 686 aa5.67□□□□□ -1.5
SF3B1-209ENST00000479532 WWP2O00308 870 aa5.67□□□□□ -1.5
SF3B1-209ENST00000479532 UPK1AO00322 258 aa5.67□□□□□ -1.5
SF3B1-209ENST00000479532 TP53I11O14683 189 aa5.67□□□□□ -1.5
SF3B1-209ENST00000479532 PEX14O75381 377 aa5.67□□□□□ -1.5
SF3B1-209ENST00000479532 GMNNO75496 209 aa5.67□□□□□ -1.5
SF3B1-209ENST00000479532 TSPAN9O75954 239 aa5.67□□□□□ -1.5
SF3B1-209ENST00000479532 OR2J2O76002 312 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms