RNA–Protein interactions for RNA: ENST00000478913.1

CCDC171-207, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-207ENST00000478913 DEPPQ9NTK1 212 aa3.98□□□□□ -1.77
CCDC171-207ENST00000478913 CHMP5Q9NZZ3 219 aa3.98□□□□□ -1.77
CCDC171-207ENST00000478913 ERVK-19Q9WJR5 959 aa3.98□□□□□ -1.77
CCDC171-207ENST00000478913 CADP27708 2225 aa3.97□□□□□ -1.77
CCDC171-207ENST00000478913 SMIM30A4D0T7 59 aa3.97□□□□□ -1.77
CCDC171-207ENST00000478913 TMEM150BA6NC51 233 aa3.97□□□□□ -1.77
CCDC171-207ENST00000478913 SRRM4A7MD48 611 aaKnown RBP3.97□□□□□ -1.77
CCDC171-207ENST00000478913 ERI2A8K979 691 aaKnown RBP3.97□□□□□ -1.77
CCDC171-207ENST00000478913 IDSB3KWA1 339 aa3.97□□□□□ -1.77
CCDC171-207ENST00000478913 SHISA9B4DS77 424 aa3.97□□□□□ -1.77
CCDC171-207ENST00000478913 FBP2O00757 339 aa3.97□□□□□ -1.77
CCDC171-207ENST00000478913 OGTO15294 1046 aa3.97□□□□□ -1.77
CCDC171-207ENST00000478913 SLC19A2O60779 497 aa3.97□□□□□ -1.77
CCDC171-207ENST00000478913 CISD3P0C7P0 127 aa3.97□□□□□ -1.77
CCDC171-207ENST00000478913 PRB4P10163 310 aaPredicted RBP3.97□□□□□ -1.77
CCDC171-207ENST00000478913 IDSP22304 550 aa3.97□□□□□ -1.77
CCDC171-207ENST00000478913 NOVP48745 357 aa3.97□□□□□ -1.77
CCDC171-207ENST00000478913 PGFP49763 221 aa3.97□□□□□ -1.77
CCDC171-207ENST00000478913 FHITP49789 147 aa3.97□□□□□ -1.77
CCDC171-207ENST00000478913 SERPINH1P50454 418 aaKnown RBP3.97□□□□□ -1.77
CCDC171-207ENST00000478913 SIX1Q15475 284 aaPredicted RBP3.97□□□□□ -1.77
CCDC171-207ENST00000478913 SLC39A12Q504Y0 691 aa3.97□□□□□ -1.77
CCDC171-207ENST00000478913 MUC21Q5SSG8 566 aa3.97□□□□□ -1.77
CCDC171-207ENST00000478913 OR6B2Q6IFH4 312 aa3.97□□□□□ -1.77
CCDC171-207ENST00000478913 NEPROQ6NW34 567 aa3.97□□□□□ -1.77
CCDC171-207ENST00000478913 ARMCX5Q6P1M9 558 aa3.97□□□□□ -1.77
CCDC171-207ENST00000478913 ZNF730Q6ZMV8 503 aa3.97□□□□□ -1.77
CCDC171-207ENST00000478913 STRADAQ7RTN6 431 aa3.97□□□□□ -1.77
CCDC171-207ENST00000478913 ACOT1Q86TX2 421 aa3.97□□□□□ -1.77
CCDC171-207ENST00000478913 SLC25A42Q86VD7 318 aa3.97□□□□□ -1.77
CCDC171-207ENST00000478913 LMNTD2Q8IXW0 634 aa3.97□□□□□ -1.77
CCDC171-207ENST00000478913 LYG1Q8N1E2 194 aa3.97□□□□□ -1.77
CCDC171-207ENST00000478913 C10orf53Q8N6V4 93 aa3.97□□□□□ -1.77
CCDC171-207ENST00000478913 POM121L12Q8N7R1 296 aa3.97□□□□□ -1.77
CCDC171-207ENST00000478913 TRPV3Q8NET8 790 aa3.97□□□□□ -1.77
CCDC171-207ENST00000478913 KLK6Q92876 244 aa3.97□□□□□ -1.77
CCDC171-207ENST00000478913 NABP1Q96AH0 204 aa3.97□□□□□ -1.77
CCDC171-207ENST00000478913 CCDC127Q96BQ5 260 aa3.97□□□□□ -1.77
CCDC171-207ENST00000478913 CCDC51Q96ER9 411 aa3.97□□□□□ -1.77
CCDC171-207ENST00000478913 EPSTI1Q96J88 318 aa3.97□□□□□ -1.77
CCDC171-207ENST00000478913 CNDP1Q96KN2 507 aa3.97□□□□□ -1.77
CCDC171-207ENST00000478913 ANKRD27Q96NW4 1050 aa3.97□□□□□ -1.77
CCDC171-207ENST00000478913 COL21A1Q96P44 957 aa3.97□□□□□ -1.77
CCDC171-207ENST00000478913 RUFY1Q96T51 708 aa3.97□□□□□ -1.77
CCDC171-207ENST00000478913 ZNF577Q9BSK1 485 aa3.97□□□□□ -1.77
CCDC171-207ENST00000478913 BBS2Q9BXC9 721 aa3.97□□□□□ -1.77
CCDC171-207ENST00000478913 CHMP4BQ9H444 224 aaKnown RBP3.97□□□□□ -1.77
CCDC171-207ENST00000478913 RWDD1Q9H446 243 aaPredicted RBP3.97□□□□□ -1.77
CCDC171-207ENST00000478913 SEC14L3Q9UDX4 400 aa3.97□□□□□ -1.77
CCDC171-207ENST00000478913 PSORS1C1Q9UIG5 152 aa3.97□□□□□ -1.77
CCDC171-207ENST00000478913 FBXW2Q9UKT8 454 aa3.97□□□□□ -1.77
CCDC171-207ENST00000478913 KCNK6Q9Y257 313 aa3.97□□□□□ -1.77
CCDC171-207ENST00000478913 L3MBTL1Q9Y468 752 aa3.97□□□□□ -1.77
CCDC171-207ENST00000478913 OR1A2Q9Y585 309 aa3.97□□□□□ -1.77
CCDC171-207ENST00000478913 GTF3C1Q12789 2109 aa3.97□□□□□ -1.77
CCDC171-207ENST00000478913 IGHV5-10-1A0A0J9YXX1 117 aa3.96□□□□□ -1.78
CCDC171-207ENST00000478913 ATP6AP2A0A1C7CYW4 349 aa3.96□□□□□ -1.78
CCDC171-207ENST00000478913 TMEM129A0AVI4 362 aa3.96□□□□□ -1.78
CCDC171-207ENST00000478913 OR5H15A6NDH6 313 aa3.96□□□□□ -1.78
CCDC171-207ENST00000478913 IGLON5A6NGN9 336 aa3.96□□□□□ -1.78
CCDC171-207ENST00000478913 PRAMEF26H0Y7S4 382 aa3.96□□□□□ -1.78
CCDC171-207ENST00000478913 CACNB4O00305 520 aaPredicted RBP3.96□□□□□ -1.78
CCDC171-207ENST00000478913 SLC31A1O15431 190 aa3.96□□□□□ -1.78
CCDC171-207ENST00000478913 B4GALT5O43286 388 aa3.96□□□□□ -1.78
CCDC171-207ENST00000478913 FMO6PO60774 539 aa3.96□□□□□ -1.78
CCDC171-207ENST00000478913 ARF4P18085 180 aaPredicted RBP3.96□□□□□ -1.78
CCDC171-207ENST00000478913 LMO2P25791 158 aa3.96□□□□□ -1.78
CCDC171-207ENST00000478913 AXLP30530 894 aa3.96□□□□□ -1.78
CCDC171-207ENST00000478913 KHKP50053 298 aa3.96□□□□□ -1.78
CCDC171-207ENST00000478913 CCR4P51679 360 aa3.96□□□□□ -1.78
CCDC171-207ENST00000478913 COX10Q12887 443 aa3.96□□□□□ -1.78
CCDC171-207ENST00000478913 MORF4L2Q15014 288 aa3.96□□□□□ -1.78
CCDC171-207ENST00000478913 ODF2Q5BJF6 829 aa3.96□□□□□ -1.78
CCDC171-207ENST00000478913 TCTEX1D4Q5JR98 221 aa3.96□□□□□ -1.78
CCDC171-207ENST00000478913 TEX35Q5T0J7 233 aa3.96□□□□□ -1.78
CCDC171-207ENST00000478913 TMEM270Q6UE05 265 aa3.96□□□□□ -1.78
CCDC171-207ENST00000478913 BBS7Q8IWZ6 715 aa3.96□□□□□ -1.78
CCDC171-207ENST00000478913 SLC22A18ASQ8N1D0 253 aa3.96□□□□□ -1.78
CCDC171-207ENST00000478913 GPATCH11Q8N954 259 aa3.96□□□□□ -1.78
CCDC171-207ENST00000478913 BANPQ8N9N5 519 aa3.96□□□□□ -1.78
CCDC171-207ENST00000478913 LPCAT1Q8NF37 534 aa3.96□□□□□ -1.78
CCDC171-207ENST00000478913 SLC22A8Q8TCC7 542 aa3.96□□□□□ -1.78
CCDC171-207ENST00000478913 PCNPQ8WW12 178 aaKnown RBP3.96□□□□□ -1.78
CCDC171-207ENST00000478913 PTP4A1Q93096 173 aa3.96□□□□□ -1.78
CCDC171-207ENST00000478913 SSX3Q99909 188 aa3.96□□□□□ -1.78
CCDC171-207ENST00000478913 APMAPQ9HDC9 416 aa3.96□□□□□ -1.78
CCDC171-207ENST00000478913 PRSS16Q9NQE7 514 aa3.96□□□□□ -1.78
CCDC171-207ENST00000478913 PNPLA3Q9NST1 481 aa3.96□□□□□ -1.78
CCDC171-207ENST00000478913 MED29Q9NX70 200 aa3.96□□□□□ -1.78
CCDC171-207ENST00000478913 THYN1Q9P016 225 aa3.96□□□□□ -1.78
CCDC171-207ENST00000478913 TEKT2Q9UIF3 430 aa3.96□□□□□ -1.78
CCDC171-207ENST00000478913 MMP24Q9Y5R2 645 aa3.96□□□□□ -1.78
CCDC171-207ENST00000478913 FRAS1Q86XX4 4008 aa3.96□□□□□ -1.78
CCDC171-207ENST00000478913 HECTD4Q9Y4D8 3996 aa3.95□□□□□ -1.78
CCDC171-207ENST00000478913 CSMD3Q7Z407 3707 aa3.95□□□□□ -1.78
CCDC171-207ENST00000478913 MYOFQ9NZM1 2061 aa3.95□□□□□ -1.78
CCDC171-207ENST00000478913 ZNF638Q14966 1978 aaKnown RBP3.95□□□□□ -1.78
CCDC171-207ENST00000478913 LOC390937A0A1W2PQ73 354 aa3.95□□□□□ -1.78
CCDC171-207ENST00000478913 G3V4G9 280 aa3.95□□□□□ -1.78
CCDC171-207ENST00000478913 K7EQG2 157 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms