RNA–Protein interactions for RNA: ENST00000478473.1

C9orf3-215, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-215ENST00000478473 WFIKKN1Q96NZ8 548 aa20.92■□□□□ 0.94
C9orf3-215ENST00000478473 SRXN1Q9BYN0 137 aa20.92■□□□□ 0.94
C9orf3-215ENST00000478473 PRDM4Q9UKN5 801 aa20.92■□□□□ 0.94
C9orf3-215ENST00000478473 AGAP5A6NIR3 686 aa20.91■□□□□ 0.94
C9orf3-215ENST00000478473 KRT75O95678 551 aa20.91■□□□□ 0.94
C9orf3-215ENST00000478473 AGTR1P30556 359 aa20.91■□□□□ 0.94
C9orf3-215ENST00000478473 CTBP2P56545 445 aa20.91■□□□□ 0.94
C9orf3-215ENST00000478473 MAPK11Q15759 364 aa20.91■□□□□ 0.94
C9orf3-215ENST00000478473 TIGD2Q4W5G0 525 aa20.91■□□□□ 0.94
C9orf3-215ENST00000478473 TTMPQ5BVD1 217 aa20.91■□□□□ 0.94
C9orf3-215ENST00000478473 C3orf33Q6P1S2 294 aa20.91■□□□□ 0.94
C9orf3-215ENST00000478473 PAMR1Q6UXH9 720 aa20.91■□□□□ 0.94
C9orf3-215ENST00000478473 SLC43A2Q8N370 569 aa20.91■□□□□ 0.94
C9orf3-215ENST00000478473 TMCO5AQ8N6Q1 288 aa20.91■□□□□ 0.94
C9orf3-215ENST00000478473 RFWD2Q8NHY2 731 aa20.91■□□□□ 0.94
C9orf3-215ENST00000478473 OR10A4Q9H209 315 aa20.91■□□□□ 0.94
C9orf3-215ENST00000478473 MTHFD2LQ9H903 347 aaPredicted RBP20.91■□□□□ 0.94
C9orf3-215ENST00000478473 VIPAS39Q9H9C1 493 aa20.91■□□□□ 0.94
C9orf3-215ENST00000478473 ST6GALNAC1Q9NSC7 600 aaPredicted RBP20.91■□□□□ 0.94
C9orf3-215ENST00000478473 SLC6A13Q9NSD5 602 aa20.91■□□□□ 0.94
C9orf3-215ENST00000478473 A0A1W2PPR1 153 aa20.9■□□□□ 0.94
C9orf3-215ENST00000478473 CASKO14936 926 aa20.9■□□□□ 0.94
C9orf3-215ENST00000478473 BCAS1O75363 584 aaPredicted RBP20.9■□□□□ 0.94
C9orf3-215ENST00000478473 PLGP00747 810 aaPredicted RBP20.9■□□□□ 0.94
C9orf3-215ENST00000478473 CHRM4P08173 479 aa20.9■□□□□ 0.94
C9orf3-215ENST00000478473 UBTFL6P0CB48 400 aaPredicted RBP20.9■□□□□ 0.94
C9orf3-215ENST00000478473 CRYGSP22914 178 aa20.9■□□□□ 0.94
C9orf3-215ENST00000478473 SYPL1Q16563 259 aa20.9■□□□□ 0.94
C9orf3-215ENST00000478473 GPAT3Q53EU6 434 aa20.9■□□□□ 0.94
C9orf3-215ENST00000478473 PLEKHM3Q6ZWE6 761 aa20.9■□□□□ 0.94
C9orf3-215ENST00000478473 ANKFN1Q8N957 763 aa20.9■□□□□ 0.94
C9orf3-215ENST00000478473 SLC25A43Q8WUT9 341 aaPredicted RBP20.9■□□□□ 0.94
C9orf3-215ENST00000478473 TACO1Q9BSH4 297 aaKnown RBP20.9■□□□□ 0.94
C9orf3-215ENST00000478473 CCDC106Q9BWC9 280 aa20.9■□□□□ 0.94
C9orf3-215ENST00000478473 ZNF226Q9NYT6 803 aa20.9■□□□□ 0.94
C9orf3-215ENST00000478473 KLHL13Q9P2N7 655 aa20.9■□□□□ 0.94
C9orf3-215ENST00000478473 CLEC4AQ9UMR7 237 aa20.9■□□□□ 0.94
C9orf3-215ENST00000478473 DSPPQ9NZW4 1301 aa20.89■□□□□ 0.93
C9orf3-215ENST00000478473 FAM234BA2RU67 622 aa20.89■□□□□ 0.93
C9orf3-215ENST00000478473 DEFB108AA8MXU0 73 aa20.89■□□□□ 0.93
C9orf3-215ENST00000478473 FAAHO00519 579 aa20.89■□□□□ 0.93
C9orf3-215ENST00000478473 DIAPH2O60879 1101 aa20.89■□□□□ 0.93
C9orf3-215ENST00000478473 GSNP06396 782 aa20.89■□□□□ 0.93
C9orf3-215ENST00000478473 H2AFXP16104 143 aaPredicted RBP20.89■□□□□ 0.93
C9orf3-215ENST00000478473 PPP3CBP16298 524 aa20.89■□□□□ 0.93
C9orf3-215ENST00000478473 FKBP2P26885 142 aaKnown RBP20.89■□□□□ 0.93
C9orf3-215ENST00000478473 APOBEC1P41238 236 aaKnown RBP20.89■□□□□ 0.93
C9orf3-215ENST00000478473 CCR4P51679 360 aa20.89■□□□□ 0.93
C9orf3-215ENST00000478473 POLR2JP52435 117 aaKnown RBP20.89■□□□□ 0.93
C9orf3-215ENST00000478473 ART1P52961 327 aa20.89■□□□□ 0.93
C9orf3-215ENST00000478473 HPCAP84074 193 aa20.89■□□□□ 0.93
C9orf3-215ENST00000478473 COX20Q5RI15 118 aa20.89■□□□□ 0.93
C9orf3-215ENST00000478473 BEND4Q6ZU67 534 aa20.89■□□□□ 0.93
C9orf3-215ENST00000478473 MIER2Q8N344 545 aa20.89■□□□□ 0.93
C9orf3-215ENST00000478473 LRRC8CQ8TDW0 803 aa20.89■□□□□ 0.93
C9orf3-215ENST00000478473 ABHD3Q8WU67 409 aa20.89■□□□□ 0.93
C9orf3-215ENST00000478473 STON2Q8WXE9 905 aa20.89■□□□□ 0.93
C9orf3-215ENST00000478473 ROBO4Q8WZ75 1007 aa20.89■□□□□ 0.93
C9orf3-215ENST00000478473 RMND5AQ9H871 391 aa20.89■□□□□ 0.93
C9orf3-215ENST00000478473 BCO1Q9HAY6 547 aa20.89■□□□□ 0.93
C9orf3-215ENST00000478473 SLCO1B3Q9NPD5 702 aa20.89■□□□□ 0.93
C9orf3-215ENST00000478473 TMEM45AQ9NWC5 275 aa20.89■□□□□ 0.93
C9orf3-215ENST00000478473 PRRC2AP48634 2157 aaKnown RBP20.88■□□□□ 0.93
C9orf3-215ENST00000478473 SIAH2O43255 324 aa20.88■□□□□ 0.93
C9orf3-215ENST00000478473 ADAM11O75078 769 aa20.88■□□□□ 0.93
C9orf3-215ENST00000478473 PRKD3O94806 890 aa20.88■□□□□ 0.93
C9orf3-215ENST00000478473 PSMB1P20618 241 aaKnown RBP20.88■□□□□ 0.93
C9orf3-215ENST00000478473 IRX1P78414 480 aaPredicted RBP20.88■□□□□ 0.93
C9orf3-215ENST00000478473 STAC2Q6ZMT1 411 aa20.88■□□□□ 0.93
C9orf3-215ENST00000478473 FCRLAQ7L513 359 aa20.88■□□□□ 0.93
C9orf3-215ENST00000478473 OR9I1Q8NGQ6 314 aa20.88■□□□□ 0.93
C9orf3-215ENST00000478473 REXO5Q96IC2 774 aaKnown RBP20.88■□□□□ 0.93
C9orf3-215ENST00000478473 ITCHQ96J02 903 aa20.88■□□□□ 0.93
C9orf3-215ENST00000478473 CCDC28BQ9BUN5 200 aa20.88■□□□□ 0.93
C9orf3-215ENST00000478473 TPT1P8Q9HAU6 139 aa20.88■□□□□ 0.93
C9orf3-215ENST00000478473 FANCFQ9NPI8 374 aa20.88■□□□□ 0.93
C9orf3-215ENST00000478473 SERINC1Q9NRX5 453 aa20.88■□□□□ 0.93
C9orf3-215ENST00000478473 CCM2LQ9NUG4 571 aaPredicted RBP20.88■□□□□ 0.93
C9orf3-215ENST00000478473 ING1Q9UK53 422 aaPredicted RBP20.88■□□□□ 0.93
C9orf3-215ENST00000478473 ITPR3Q14573 2671 aa20.88■□□□□ 0.93
C9orf3-215ENST00000478473 HMGB1P1B2RPK0 211 aaPredicted RBP20.87■□□□□ 0.93
C9orf3-215ENST00000478473 HOXB9P17482 250 aaPredicted RBP20.87■□□□□ 0.93
C9orf3-215ENST00000478473 DNASE1P24855 282 aa20.87■□□□□ 0.93
C9orf3-215ENST00000478473 SLC7A1P30825 629 aa20.87■□□□□ 0.93
C9orf3-215ENST00000478473 KCNJ5P48544 419 aa20.87■□□□□ 0.93
C9orf3-215ENST00000478473 CLK1P49759 484 aaKnown RBP20.87■□□□□ 0.93
C9orf3-215ENST00000478473 PPP4R4Q6NUP7 873 aa20.87■□□□□ 0.93
C9orf3-215ENST00000478473 TMPPEQ6ZT21 453 aa20.87■□□□□ 0.93
C9orf3-215ENST00000478473 C22orf34Q6ZV56 151 aa20.87■□□□□ 0.93
C9orf3-215ENST00000478473 GRINAQ7Z429 371 aa20.87■□□□□ 0.93
C9orf3-215ENST00000478473 STK32CQ86UX6 486 aa20.87■□□□□ 0.93
C9orf3-215ENST00000478473 GTF2H4Q92759 462 aa20.87■□□□□ 0.93
C9orf3-215ENST00000478473 ALPK1Q96QP1 1244 aa20.87■□□□□ 0.93
C9orf3-215ENST00000478473 MED18Q9BUE0 208 aa20.87■□□□□ 0.93
C9orf3-215ENST00000478473 QRSL1Q9H0R6 528 aaKnown RBP20.87■□□□□ 0.93
C9orf3-215ENST00000478473 TCF7L2Q9NQB0 619 aa20.87■□□□□ 0.93
C9orf3-215ENST00000478473 THUMPD1Q9NXG2 353 aaKnown RBP20.87■□□□□ 0.93
C9orf3-215ENST00000478473 KLHL28Q9NXS3 571 aa20.87■□□□□ 0.93
C9orf3-215ENST00000478473 GMEB1Q9Y692 573 aa20.87■□□□□ 0.93
C9orf3-215ENST00000478473 A0A1W2PNR3 127 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms