RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 LRRC74AQ0VAA2 488 aa12.85□□□□□ -0.35
SMARCE1-209ENST00000478349 RASGEF1BQ0VAM2 473 aa12.85□□□□□ -0.35
SMARCE1-209ENST00000478349 SKP2Q13309 424 aa12.85□□□□□ -0.35
SMARCE1-209ENST00000478349 TIGD2Q4W5G0 525 aa12.85□□□□□ -0.35
SMARCE1-209ENST00000478349 WDR93Q6P2C0 686 aa12.85□□□□□ -0.35
SMARCE1-209ENST00000478349 Q71RC1 249 aaPredicted RBP12.85□□□□□ -0.35
SMARCE1-209ENST00000478349 CROCCP2Q86T23 111 aa12.85□□□□□ -0.35
SMARCE1-209ENST00000478349 TRIML2Q8N7C3 387 aa12.85□□□□□ -0.35
SMARCE1-209ENST00000478349 MIPOL1Q8TD10 442 aa12.85□□□□□ -0.35
SMARCE1-209ENST00000478349 AENQ8WTP8 325 aaKnown RBP12.85□□□□□ -0.35
SMARCE1-209ENST00000478349 AKAP1Q92667 903 aaKnown RBP eCLIP12.85□□□□□ -0.35
SMARCE1-209ENST00000478349 GTPBP3Q969Y2 492 aaKnown RBP12.85□□□□□ -0.35
SMARCE1-209ENST00000478349 TESCQ96BS2 214 aa12.85□□□□□ -0.35
SMARCE1-209ENST00000478349 OR5B2Q96R09 309 aa12.85□□□□□ -0.35
SMARCE1-209ENST00000478349 SMR3AQ99954 134 aa12.85□□□□□ -0.35
SMARCE1-209ENST00000478349 RAP2CQ9Y3L5 183 aa12.85□□□□□ -0.35
SMARCE1-209ENST00000478349 WDR45Q9Y484 360 aa12.85□□□□□ -0.35
SMARCE1-209ENST00000478349 PRSS51A0A1B0GVH4 220 aa12.84□□□□□ -0.35
SMARCE1-209ENST00000478349 ZNF724A8MTY0 619 aa12.84□□□□□ -0.35
SMARCE1-209ENST00000478349 GPR171O14626 319 aa12.84□□□□□ -0.35
SMARCE1-209ENST00000478349 OIP5O43482 229 aa12.84□□□□□ -0.35
SMARCE1-209ENST00000478349 DNPH1O43598 174 aa12.84□□□□□ -0.35
SMARCE1-209ENST00000478349 KIAA0513O60268 411 aa12.84□□□□□ -0.35
SMARCE1-209ENST00000478349 ADAP00813 363 aa12.84□□□□□ -0.35
SMARCE1-209ENST00000478349 UBTFL6P0CB48 400 aaPredicted RBP12.84□□□□□ -0.35
SMARCE1-209ENST00000478349 NID1P14543 1247 aa12.84□□□□□ -0.35
SMARCE1-209ENST00000478349 UQCRBP14927 111 aa12.84□□□□□ -0.35
SMARCE1-209ENST00000478349 CHI3L1P36222 383 aaPredicted RBP12.84□□□□□ -0.35
SMARCE1-209ENST00000478349 APOBEC1P41238 236 aaKnown RBP12.84□□□□□ -0.35
SMARCE1-209ENST00000478349 ETV4P43268 484 aa12.84□□□□□ -0.35
SMARCE1-209ENST00000478349 OR3A2P47893 321 aa12.84□□□□□ -0.35
SMARCE1-209ENST00000478349 RPL14P50914 215 aaKnown RBP12.84□□□□□ -0.35
SMARCE1-209ENST00000478349 ABCE1P61221 599 aaKnown RBP12.84□□□□□ -0.35
SMARCE1-209ENST00000478349 RPS26P62854 115 aaKnown RBP12.84□□□□□ -0.35
SMARCE1-209ENST00000478349 MERTKQ12866 999 aa12.84□□□□□ -0.35
SMARCE1-209ENST00000478349 GNA13Q14344 377 aa12.84□□□□□ -0.35
SMARCE1-209ENST00000478349 CHI3L2Q15782 390 aa12.84□□□□□ -0.35
SMARCE1-209ENST00000478349 TOMM34Q15785 309 aaPredicted RBP12.84□□□□□ -0.35
SMARCE1-209ENST00000478349 SYT14P1Q58G82 188 aa12.84□□□□□ -0.35
SMARCE1-209ENST00000478349 OR4F3Q6IEY1 312 aa12.84□□□□□ -0.35
SMARCE1-209ENST00000478349 C22orf34Q6ZV56 151 aa12.84□□□□□ -0.35
SMARCE1-209ENST00000478349 BHLHA15Q7RTS1 189 aaPredicted RBP12.84□□□□□ -0.35
SMARCE1-209ENST00000478349 NUFIP2Q7Z417 695 aaKnown RBP12.84□□□□□ -0.35
SMARCE1-209ENST00000478349 GALNT5Q7Z7M9 940 aa12.84□□□□□ -0.35
SMARCE1-209ENST00000478349 P2RY8Q86VZ1 359 aa12.84□□□□□ -0.35
SMARCE1-209ENST00000478349 ZNF100Q8IYN0 542 aa12.84□□□□□ -0.35
SMARCE1-209ENST00000478349 ZNF563Q8TA94 476 aa12.84□□□□□ -0.35
SMARCE1-209ENST00000478349 PSD2Q9BQI7 771 aa12.84□□□□□ -0.35
SMARCE1-209ENST00000478349 THUMPD3Q9BV44 507 aaKnown RBP12.84□□□□□ -0.35
SMARCE1-209ENST00000478349 ALG2Q9H553 416 aa12.84□□□□□ -0.35
SMARCE1-209ENST00000478349 ACER3Q9NUN7 267 aa12.84□□□□□ -0.35
SMARCE1-209ENST00000478349 KCNE3Q9Y6H6 103 aa12.84□□□□□ -0.35
SMARCE1-209ENST00000478349 A0A1W2PP18 115 aa12.83□□□□□ -0.36
SMARCE1-209ENST00000478349 SULT2B1O00204 365 aa12.83□□□□□ -0.36
SMARCE1-209ENST00000478349 CYTIPO60759 359 aa12.83□□□□□ -0.36
SMARCE1-209ENST00000478349 LY6G6DO95868 133 aa12.83□□□□□ -0.36
SMARCE1-209ENST00000478349 TFPIP10646 304 aa12.83□□□□□ -0.36
SMARCE1-209ENST00000478349 LBPP18428 481 aa12.83□□□□□ -0.36
SMARCE1-209ENST00000478349 HTR3AP46098 478 aa12.83□□□□□ -0.36
SMARCE1-209ENST00000478349 CLK1P49759 484 aaKnown RBP12.83□□□□□ -0.36
SMARCE1-209ENST00000478349 RNF144AP50876 292 aaPredicted RBP12.83□□□□□ -0.36
SMARCE1-209ENST00000478349 ZNF844Q08AG5 666 aa12.83□□□□□ -0.36
SMARCE1-209ENST00000478349 TAB1Q15750 504 aa12.83□□□□□ -0.36
SMARCE1-209ENST00000478349 NDUFAF6Q330K2 333 aa12.83□□□□□ -0.36
SMARCE1-209ENST00000478349 NCMAPQ5T1S8 102 aa12.83□□□□□ -0.36
SMARCE1-209ENST00000478349 CMIPQ8IY22 773 aa12.83□□□□□ -0.36
SMARCE1-209ENST00000478349 CLECL1Q8IZS7 167 aa12.83□□□□□ -0.36
SMARCE1-209ENST00000478349 MREGQ8N565 214 aa12.83□□□□□ -0.36
SMARCE1-209ENST00000478349 PIGXQ8TBF5 258 aa12.83□□□□□ -0.36
SMARCE1-209ENST00000478349 RADILQ96JH8 1075 aa12.83□□□□□ -0.36
SMARCE1-209ENST00000478349 OR51I1Q9H343 314 aa12.83□□□□□ -0.36
SMARCE1-209ENST00000478349 AKTIPQ9H8T0 292 aa12.83□□□□□ -0.36
SMARCE1-209ENST00000478349 BARX1Q9HBU1 254 aaPredicted RBP12.83□□□□□ -0.36
SMARCE1-209ENST00000478349 MKLN1Q9UL63 735 aa12.83□□□□□ -0.36
SMARCE1-209ENST00000478349 LAMP3Q9UQV4 416 aa12.83□□□□□ -0.36
SMARCE1-209ENST00000478349 A0A1W2PNR3 127 aa12.82□□□□□ -0.36
SMARCE1-209ENST00000478349 TRIM64A6NGJ6 449 aa12.82□□□□□ -0.36
SMARCE1-209ENST00000478349 TRIM64BA6NI03 449 aa12.82□□□□□ -0.36
SMARCE1-209ENST00000478349 E9PBE3 544 aa12.82□□□□□ -0.36
SMARCE1-209ENST00000478349 SMAD9O15198 467 aaKnown RBP12.82□□□□□ -0.36
SMARCE1-209ENST00000478349 EFNA2O43921 213 aa12.82□□□□□ -0.36
SMARCE1-209ENST00000478349 DNAJA2O60884 412 aa12.82□□□□□ -0.36
SMARCE1-209ENST00000478349 UGT2B17O75795 530 aa12.82□□□□□ -0.36
SMARCE1-209ENST00000478349 GGT1P19440 569 aa12.82□□□□□ -0.36
SMARCE1-209ENST00000478349 ARRB2P32121 409 aa12.82□□□□□ -0.36
SMARCE1-209ENST00000478349 DIO1P49895 249 aa12.82□□□□□ -0.36
SMARCE1-209ENST00000478349 SESN3P58005 492 aa12.82□□□□□ -0.36
SMARCE1-209ENST00000478349 PDK3Q15120 406 aa12.82□□□□□ -0.36
SMARCE1-209ENST00000478349 PPA1Q15181 289 aa12.82□□□□□ -0.36
SMARCE1-209ENST00000478349 STK11Q15831 433 aa12.82□□□□□ -0.36
SMARCE1-209ENST00000478349 TIMM23BQ5SRD1 257 aa12.82□□□□□ -0.36
SMARCE1-209ENST00000478349 HEPHL1Q6MZM0 1159 aa12.82□□□□□ -0.36
SMARCE1-209ENST00000478349 TMPPEQ6ZT21 453 aa12.82□□□□□ -0.36
SMARCE1-209ENST00000478349 GRINAQ7Z429 371 aa12.82□□□□□ -0.36
SMARCE1-209ENST00000478349 ZNF619Q8N2I2 560 aa12.82□□□□□ -0.36
SMARCE1-209ENST00000478349 ARFGAP2Q8N6H7 521 aa12.82□□□□□ -0.36
SMARCE1-209ENST00000478349 ZNF781Q8N8C0 355 aa12.82□□□□□ -0.36
SMARCE1-209ENST00000478349 XAGE5Q8WWM1 108 aa12.82□□□□□ -0.36
SMARCE1-209ENST00000478349 IGFBPL1Q8WX77 278 aa12.82□□□□□ -0.36
SMARCE1-209ENST00000478349 PKNOX2Q96KN3 472 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms