RNA–Protein interactions for RNA: ENST00000475664.1

MCF2L2-209, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 3

Gene MCF2L2, Length 460 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-209ENST00000475664 NPTX1Q15818 432 aa20.06■□□□□ 0.8
MCF2L2-209ENST00000475664 NHSL2Q5HYW2 709 aa20.06■□□□□ 0.8
MCF2L2-209ENST00000475664 GFRALQ6UXV0 394 aa20.06■□□□□ 0.8
MCF2L2-209ENST00000475664 FGD2Q7Z6J4 655 aa20.06■□□□□ 0.8
MCF2L2-209ENST00000475664 VTCN1Q7Z7D3 282 aa20.06■□□□□ 0.8
MCF2L2-209ENST00000475664 ST6GALNAC3Q8NDV1 305 aa20.06■□□□□ 0.8
MCF2L2-209ENST00000475664 OR6T1Q8NGN1 323 aa20.06■□□□□ 0.8
MCF2L2-209ENST00000475664 ZNF563Q8TA94 476 aa20.06■□□□□ 0.8
MCF2L2-209ENST00000475664 VANGL1Q8TAA9 524 aaPredicted RBP20.06■□□□□ 0.8
MCF2L2-209ENST00000475664 MMADHCQ9H3L0 296 aaPredicted RBP20.06■□□□□ 0.8
MCF2L2-209ENST00000475664 EXO5Q9H790 373 aa20.06■□□□□ 0.8
MCF2L2-209ENST00000475664 TESQ9UGI8 421 aaKnown RBP20.06■□□□□ 0.8
MCF2L2-209ENST00000475664 SAMD4AQ9UPU9 718 aaKnown RBP20.06■□□□□ 0.8
MCF2L2-209ENST00000475664 SLC9A8Q9Y2E8 581 aa20.06■□□□□ 0.8
MCF2L2-209ENST00000475664 SH3GLB1Q9Y371 365 aa20.06■□□□□ 0.8
MCF2L2-209ENST00000475664 ZGRF1Q86YA3 2104 aa20.06■□□□□ 0.8
MCF2L2-209ENST00000475664 ACOT8O14734 319 aa20.05■□□□□ 0.8
MCF2L2-209ENST00000475664 TPST2O60704 377 aa20.05■□□□□ 0.8
MCF2L2-209ENST00000475664 GP1BBP13224 206 aa20.05■□□□□ 0.8
MCF2L2-209ENST00000475664 HTR2AP28223 471 aa20.05■□□□□ 0.8
MCF2L2-209ENST00000475664 TRAP1Q12931 704 aaKnown RBP20.05■□□□□ 0.8
MCF2L2-209ENST00000475664 YTHDF3Q7Z739 585 aaKnown RBP20.05■□□□□ 0.8
MCF2L2-209ENST00000475664 CARM1Q86X55 608 aa20.05■□□□□ 0.8
MCF2L2-209ENST00000475664 RBM45Q8IUH3 476 aaKnown RBP20.05■□□□□ 0.8
MCF2L2-209ENST00000475664 FAM86B1Q8N7N1 296 aa20.05■□□□□ 0.8
MCF2L2-209ENST00000475664 HSH2DQ96JZ2 352 aa20.05■□□□□ 0.8
MCF2L2-209ENST00000475664 UGT2B28Q9BY64 529 aa20.05■□□□□ 0.8
MCF2L2-209ENST00000475664 SLC7A8Q9UHI5 535 aa20.05■□□□□ 0.8
MCF2L2-209ENST00000475664 GTF3C1Q12789 2109 aa20.05■□□□□ 0.8
MCF2L2-209ENST00000475664 OR14I1A6ND48 311 aa20.04■□□□□ 0.8
MCF2L2-209ENST00000475664 ACTL6AO96019 429 aa20.04■□□□□ 0.8
MCF2L2-209ENST00000475664 BMP7P18075 431 aa20.04■□□□□ 0.8
MCF2L2-209ENST00000475664 GCKP35557 465 aa20.04■□□□□ 0.8
MCF2L2-209ENST00000475664 SLC1A3P43003 542 aa20.04■□□□□ 0.8
MCF2L2-209ENST00000475664 COPZ1P61923 177 aa20.04■□□□□ 0.8
MCF2L2-209ENST00000475664 CRYZQ08257 329 aaKnown RBP20.04■□□□□ 0.8
MCF2L2-209ENST00000475664 VASNQ6EMK4 673 aa20.04■□□□□ 0.8
MCF2L2-209ENST00000475664 WBP2NLQ6ICG8 309 aa20.04■□□□□ 0.8
MCF2L2-209ENST00000475664 AAGABQ6PD74 315 aa20.04■□□□□ 0.8
MCF2L2-209ENST00000475664 CYP2R1Q6VVX0 501 aa20.04■□□□□ 0.8
MCF2L2-209ENST00000475664 PLEKHM3Q6ZWE6 761 aa20.04■□□□□ 0.8
MCF2L2-209ENST00000475664 GRINAQ7Z429 371 aa20.04■□□□□ 0.8
MCF2L2-209ENST00000475664 RANBP3LQ86VV4 465 aaPredicted RBP20.04■□□□□ 0.8
MCF2L2-209ENST00000475664 DHFR2Q86XF0 187 aa20.04■□□□□ 0.8
MCF2L2-209ENST00000475664 CADM2Q8N3J6 435 aa20.04■□□□□ 0.8
MCF2L2-209ENST00000475664 LSMEM1Q8N8F7 131 aa20.04■□□□□ 0.8
MCF2L2-209ENST00000475664 ZNF559Q9BR84 538 aa20.04■□□□□ 0.8
MCF2L2-209ENST00000475664 PRR14Q9BWN1 585 aa20.04■□□□□ 0.8
MCF2L2-209ENST00000475664 LINC01387J3KSC0 135 aa20.03■□□□□ 0.8
MCF2L2-209ENST00000475664 ZNHIT1O43257 154 aa20.03■□□□□ 0.8
MCF2L2-209ENST00000475664 FMO6PO60774 539 aa20.03■□□□□ 0.8
MCF2L2-209ENST00000475664 PRKD3O94806 890 aa20.03■□□□□ 0.8
MCF2L2-209ENST00000475664 ELK4P28324 431 aa20.03■□□□□ 0.8
MCF2L2-209ENST00000475664 OR1E2P47887 323 aa20.03■□□□□ 0.8
MCF2L2-209ENST00000475664 C19orf57Q0VDD7 668 aa20.03■□□□□ 0.8
MCF2L2-209ENST00000475664 IFI44LQ53G44 452 aa20.03■□□□□ 0.8
MCF2L2-209ENST00000475664 MTX3Q5HYI7 312 aa20.03■□□□□ 0.8
MCF2L2-209ENST00000475664 DCST1Q5T197 706 aa20.03■□□□□ 0.8
MCF2L2-209ENST00000475664 ENPP6Q6UWR7 440 aa20.03■□□□□ 0.8
MCF2L2-209ENST00000475664 GEMIN6Q8WXD5 167 aaKnown RBP20.03■□□□□ 0.8
MCF2L2-209ENST00000475664 ABTB1Q969K4 478 aaPredicted RBP20.03■□□□□ 0.8
MCF2L2-209ENST00000475664 SARAFQ96BY9 339 aa20.03■□□□□ 0.8
MCF2L2-209ENST00000475664 MCHR1Q99705 422 aa20.03■□□□□ 0.8
MCF2L2-209ENST00000475664 TRIM2Q9C040 744 aa20.03■□□□□ 0.8
MCF2L2-209ENST00000475664 ADAM19Q9H013 955 aa20.03■□□□□ 0.8
MCF2L2-209ENST00000475664 TNFRSF10DQ9UBN6 386 aa20.03■□□□□ 0.8
MCF2L2-209ENST00000475664 POMPQ9Y244 141 aa20.03■□□□□ 0.8
MCF2L2-209ENST00000475664 ZNF337Q9Y3M9 751 aa20.03■□□□□ 0.8
MCF2L2-209ENST00000475664 TCRBV5S2A0A599 114 aa20.02■□□□□ 0.8
MCF2L2-209ENST00000475664 EFNA2O43921 213 aa20.02■□□□□ 0.8
MCF2L2-209ENST00000475664 IL11P20809 199 aa20.02■□□□□ 0.8
MCF2L2-209ENST00000475664 PTGS2P35354 604 aa20.02■□□□□ 0.8
MCF2L2-209ENST00000475664 LHX2P50458 406 aa20.02■□□□□ 0.8
MCF2L2-209ENST00000475664 MERTKQ12866 999 aa20.02■□□□□ 0.8
MCF2L2-209ENST00000475664 PHF10Q8WUB8 498 aaKnown RBP20.02■□□□□ 0.8
MCF2L2-209ENST00000475664 TIMP4Q99727 224 aa20.02■□□□□ 0.8
MCF2L2-209ENST00000475664 A0A1B0GWA3 101 aa20.01■□□□□ 0.79
MCF2L2-209ENST00000475664 NPIPA2E9PIF3 369 aa20.01■□□□□ 0.79
MCF2L2-209ENST00000475664 NPIPA3F8WFD2 350 aa20.01■□□□□ 0.79
MCF2L2-209ENST00000475664 H3BML4 177 aa20.01■□□□□ 0.79
MCF2L2-209ENST00000475664 TACR3P29371 465 aa20.01■□□□□ 0.79
MCF2L2-209ENST00000475664 APOBEC1P41238 236 aaKnown RBP20.01■□□□□ 0.79
MCF2L2-209ENST00000475664 HTR3AP46098 478 aa20.01■□□□□ 0.79
MCF2L2-209ENST00000475664 STARP49675 285 aa20.01■□□□□ 0.79
MCF2L2-209ENST00000475664 POLR2HP52434 150 aaKnown RBP20.01■□□□□ 0.79
MCF2L2-209ENST00000475664 KCNC4Q03721 635 aa20.01■□□□□ 0.79
MCF2L2-209ENST00000475664 OR1Q1Q15612 314 aa20.01■□□□□ 0.79
MCF2L2-209ENST00000475664 ZSCAN26Q16670 478 aa20.01■□□□□ 0.79
MCF2L2-209ENST00000475664 FKBP9P1Q75LS8 142 aa20.01■□□□□ 0.79
MCF2L2-209ENST00000475664 TSPYL5Q86VY4 417 aaPredicted RBP20.01■□□□□ 0.79
MCF2L2-209ENST00000475664 GALNT11Q8NCW6 608 aa20.01■□□□□ 0.79
MCF2L2-209ENST00000475664 UTP4Q969X6 686 aaKnown RBP20.01■□□□□ 0.79
MCF2L2-209ENST00000475664 C3orf49Q96BT1 292 aa20.01■□□□□ 0.79
MCF2L2-209ENST00000475664 PYURFQ96I23 114 aa20.01■□□□□ 0.79
MCF2L2-209ENST00000475664 CTPS2Q9NRF8 586 aa20.01■□□□□ 0.79
MCF2L2-209ENST00000475664 OSGIN1Q9UJX0 560 aa20.01■□□□□ 0.79
MCF2L2-209ENST00000475664 ZNF835Q9Y2P0 537 aa20.01■□□□□ 0.79
MCF2L2-209ENST00000475664 AP4B1Q9Y6B7 739 aa20.01■□□□□ 0.79
MCF2L2-209ENST00000475664 V9GYQ6 96 aa20.01■□□□□ 0.79
MCF2L2-209ENST00000475664 BCKDKO14874 412 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms