RNA–Protein interactions for RNA: ENST00000475268.5

SEC61A2-213, Transcript of Sec61 translocon alpha 2 subunit, humanhuman

TSL 1 (best)

Gene SEC61A2, Length 2,183 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2-213ENST00000475268 ICOSLGO75144 302 aa16.79■□□□□ 0.28
SEC61A2-213ENST00000475268 CLPXO76031 633 aa16.79■□□□□ 0.28
SEC61A2-213ENST00000475268 ADH7P40394 386 aa16.79■□□□□ 0.28
SEC61A2-213ENST00000475268 ENTPD1P49961 510 aa16.79■□□□□ 0.28
SEC61A2-213ENST00000475268 GPR143P51810 404 aa16.79■□□□□ 0.28
SEC61A2-213ENST00000475268 RAB40BQ12829 278 aa16.79■□□□□ 0.28
SEC61A2-213ENST00000475268 SPHARQ15513 63 aa16.79■□□□□ 0.28
SEC61A2-213ENST00000475268 AADACL4Q5VUY2 407 aa16.79■□□□□ 0.28
SEC61A2-213ENST00000475268 RPL13AP3Q6NVV1 102 aa16.79■□□□□ 0.28
SEC61A2-213ENST00000475268 CBLN3Q6UW01 205 aa16.79■□□□□ 0.28
SEC61A2-213ENST00000475268 BBS1Q8NFJ9 593 aa16.79■□□□□ 0.28
SEC61A2-213ENST00000475268 DNAJA4Q8WW22 397 aaPredicted RBP16.79■□□□□ 0.28
SEC61A2-213ENST00000475268 RFKQ969G6 155 aa16.79■□□□□ 0.28
SEC61A2-213ENST00000475268 MESP1Q9BRJ9 268 aa16.79■□□□□ 0.28
SEC61A2-213ENST00000475268 LSM2Q9Y333 95 aaKnown RBP16.79■□□□□ 0.28
SEC61A2-213ENST00000475268 LOC100506127A0A0U1RQW1 187 aa16.79■□□□□ 0.28
SEC61A2-213ENST00000475268 FAM183AA6NL82 134 aa16.79■□□□□ 0.28
SEC61A2-213ENST00000475268 MYL12BO14950 172 aa16.79■□□□□ 0.28
SEC61A2-213ENST00000475268 GRK5P34947 590 aa16.79■□□□□ 0.28
SEC61A2-213ENST00000475268 ETV5P41161 510 aa16.79■□□□□ 0.28
SEC61A2-213ENST00000475268 ETV1P50549 477 aa16.79■□□□□ 0.28
SEC61A2-213ENST00000475268 DUSP3P51452 185 aaPredicted RBP16.79■□□□□ 0.28
SEC61A2-213ENST00000475268 GAS1P54826 345 aa16.79■□□□□ 0.28
SEC61A2-213ENST00000475268 PLCXD2Q0VAA5 305 aa16.79■□□□□ 0.28
SEC61A2-213ENST00000475268 SKP2Q13309 424 aa16.79■□□□□ 0.28
SEC61A2-213ENST00000475268 SHFQ7M4L6 423 aa16.79■□□□□ 0.28
SEC61A2-213ENST00000475268 SLCO6A1Q86UG4 719 aa16.79■□□□□ 0.28
SEC61A2-213ENST00000475268 CPOQ8IVL8 374 aa16.79■□□□□ 0.28
SEC61A2-213ENST00000475268 NANOGP1Q8N7R0 232 aa16.79■□□□□ 0.28
SEC61A2-213ENST00000475268 FAM71CQ8NEG0 241 aa16.79■□□□□ 0.28
SEC61A2-213ENST00000475268 ATOH1Q92858 354 aaPredicted RBP16.79■□□□□ 0.28
SEC61A2-213ENST00000475268 TNFRSF13CQ96RJ3 184 aa16.79■□□□□ 0.28
SEC61A2-213ENST00000475268 OR51E2Q9H255 320 aa16.79■□□□□ 0.28
SEC61A2-213ENST00000475268 ZBTB20Q9HC78 741 aaPredicted RBP16.79■□□□□ 0.28
SEC61A2-213ENST00000475268 ZNF264O43296 627 aa16.78■□□□□ 0.28
SEC61A2-213ENST00000475268 PTP4A3O75365 173 aa16.78■□□□□ 0.28
SEC61A2-213ENST00000475268 MYL12AP19105 171 aa16.78■□□□□ 0.28
SEC61A2-213ENST00000475268 RNLSQ5VYX0 342 aa16.78■□□□□ 0.28
SEC61A2-213ENST00000475268 PROKR2Q8NFJ6 384 aa16.78■□□□□ 0.28
SEC61A2-213ENST00000475268 OIT3Q8WWZ8 545 aa16.78■□□□□ 0.28
SEC61A2-213ENST00000475268 C3orf49Q96BT1 292 aa16.78■□□□□ 0.28
SEC61A2-213ENST00000475268 ZHX1-C8orf76Q96EF9 292 aa16.78■□□□□ 0.28
SEC61A2-213ENST00000475268 OPALINQ96PE5 141 aa16.78■□□□□ 0.28
SEC61A2-213ENST00000475268 HINT3Q9NQE9 182 aaKnown RBP16.78■□□□□ 0.28
SEC61A2-213ENST00000475268 MRPS18AQ9NVS2 196 aaKnown RBP16.78■□□□□ 0.28
SEC61A2-213ENST00000475268 H2AFY2Q9P0M6 372 aaPredicted RBP16.78■□□□□ 0.28
SEC61A2-213ENST00000475268 A0A087WUJ7 227 aa16.78■□□□□ 0.28
SEC61A2-213ENST00000475268 IRGMA1A4Y4 181 aa16.78■□□□□ 0.28
SEC61A2-213ENST00000475268 OR6C76A6NM76 312 aa16.78■□□□□ 0.28
SEC61A2-213ENST00000475268 GDF9O60383 454 aa16.78■□□□□ 0.28
SEC61A2-213ENST00000475268 DCTN2Q13561 401 aaKnown RBP16.78■□□□□ 0.28
SEC61A2-213ENST00000475268 TMEM44Q2T9K0 475 aa16.78■□□□□ 0.28
SEC61A2-213ENST00000475268 NXNL2Q5VZ03 156 aa16.78■□□□□ 0.28
SEC61A2-213ENST00000475268 ANKRD37Q7Z713 158 aa16.78■□□□□ 0.28
SEC61A2-213ENST00000475268 LNX2Q8N448 690 aa16.78■□□□□ 0.28
SEC61A2-213ENST00000475268 NACC2Q96BF6 587 aa16.78■□□□□ 0.28
SEC61A2-213ENST00000475268 OMA1Q96E52 524 aa16.78■□□□□ 0.28
SEC61A2-213ENST00000475268 WDFY4Q6ZS81 3184 aa16.78■□□□□ 0.28
SEC61A2-213ENST00000475268 COL5A1P20908 1838 aaPredicted RBP16.77■□□□□ 0.28
SEC61A2-213ENST00000475268 D6RAR5 112 aa16.77■□□□□ 0.28
SEC61A2-213ENST00000475268 CCRL2O00421 344 aa16.77■□□□□ 0.28
SEC61A2-213ENST00000475268 TO15178 435 aa16.77■□□□□ 0.28
SEC61A2-213ENST00000475268 HBQ1P09105 142 aa16.77■□□□□ 0.28
SEC61A2-213ENST00000475268 ABCD3P28288 659 aa16.77■□□□□ 0.28
SEC61A2-213ENST00000475268 SOX3P41225 446 aa16.77■□□□□ 0.28
SEC61A2-213ENST00000475268 FOXK2Q01167 660 aa16.77■□□□□ 0.28
SEC61A2-213ENST00000475268 C1DQ13901 141 aaKnown RBP16.77■□□□□ 0.28
SEC61A2-213ENST00000475268 SOWAHCQ53LP3 525 aaPredicted RBP16.77■□□□□ 0.28
SEC61A2-213ENST00000475268 C3orf38Q5JPI3 329 aa16.77■□□□□ 0.28
SEC61A2-213ENST00000475268 FCRLBQ6BAA4 426 aa16.77■□□□□ 0.28
SEC61A2-213ENST00000475268 WBP2NLQ6ICG8 309 aa16.77■□□□□ 0.28
SEC61A2-213ENST00000475268 PLBD1Q6P4A8 553 aa16.77■□□□□ 0.28
SEC61A2-213ENST00000475268 CXXC5Q7LFL8 322 aaKnown RBP16.77■□□□□ 0.28
SEC61A2-213ENST00000475268 OVCH1Q7RTY7 1134 aa16.77■□□□□ 0.28
SEC61A2-213ENST00000475268 DYNC2LI1Q8TCX1 351 aa16.77■□□□□ 0.28
SEC61A2-213ENST00000475268 SH3YL1Q96HL8 342 aaPredicted RBP16.77■□□□□ 0.28
SEC61A2-213ENST00000475268 CHCHD6Q9BRQ6 235 aa16.77■□□□□ 0.28
SEC61A2-213ENST00000475268 RTN4RQ9BZR6 473 aa16.77■□□□□ 0.28
SEC61A2-213ENST00000475268 FGF20Q9NP95 211 aaPredicted RBP16.77■□□□□ 0.28
SEC61A2-213ENST00000475268 CHCHD3Q9NX63 227 aaKnown RBP16.77■□□□□ 0.28
SEC61A2-213ENST00000475268 FAM86C2PA6NEL3 165 aa16.77■□□□□ 0.27
SEC61A2-213ENST00000475268 SOCS6O14544 535 aa16.77■□□□□ 0.27
SEC61A2-213ENST00000475268 GMFGO60234 142 aa16.77■□□□□ 0.27
SEC61A2-213ENST00000475268 TSPAN2O60636 221 aa16.77■□□□□ 0.27
SEC61A2-213ENST00000475268 ALOX12BO75342 701 aa16.77■□□□□ 0.27
SEC61A2-213ENST00000475268 NADKO95544 446 aaPredicted RBP16.77■□□□□ 0.27
SEC61A2-213ENST00000475268 SCG5P05408 212 aa16.77■□□□□ 0.27
SEC61A2-213ENST00000475268 SSX1Q16384 188 aa16.77■□□□□ 0.27
SEC61A2-213ENST00000475268 DGUOKQ16854 277 aa16.77■□□□□ 0.27
SEC61A2-213ENST00000475268 ZNF385CQ66K41 422 aaPredicted RBP16.77■□□□□ 0.27
SEC61A2-213ENST00000475268 TCEAL6Q6IPX3 200 aa16.77■□□□□ 0.27
SEC61A2-213ENST00000475268 RTL4Q6ZR62 310 aa16.77■□□□□ 0.27
SEC61A2-213ENST00000475268 METTL21AQ8WXB1 218 aa16.77■□□□□ 0.27
SEC61A2-213ENST00000475268 TCEAL3Q969E4 200 aa16.77■□□□□ 0.27
SEC61A2-213ENST00000475268 SGTBQ96EQ0 304 aa16.77■□□□□ 0.27
SEC61A2-213ENST00000475268 HSPBAP1Q96EW2 488 aa16.77■□□□□ 0.27
SEC61A2-213ENST00000475268 DCSTAMPQ9H295 470 aa16.77■□□□□ 0.27
SEC61A2-213ENST00000475268 MED20Q9H944 212 aa16.77■□□□□ 0.27
SEC61A2-213ENST00000475268 MCCC2Q9HCC0 563 aa16.77■□□□□ 0.27
SEC61A2-213ENST00000475268 EXOSC3Q9NQT5 275 aaKnown RBP16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms