RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 INTS11Q5TA45 600 aaKnown RBP12.39□□□□□ -0.43
USF1-205ENST00000473969 RNF220Q5VTB9 566 aa12.39□□□□□ -0.43
USF1-205ENST00000473969 EEF1A1P5Q5VTE0 462 aa12.39□□□□□ -0.43
USF1-205ENST00000473969 HBMQ6B0K9 141 aa12.39□□□□□ -0.43
USF1-205ENST00000473969 OR2A2Q6IF42 318 aa12.39□□□□□ -0.43
USF1-205ENST00000473969 NANOGP8Q6NSW7 305 aa12.39□□□□□ -0.43
USF1-205ENST00000473969 POMZP3Q6PJE2 187 aa12.39□□□□□ -0.43
USF1-205ENST00000473969 ZNF836Q6ZNA1 936 aa12.39□□□□□ -0.43
USF1-205ENST00000473969 GRINAQ7Z429 371 aa12.39□□□□□ -0.43
USF1-205ENST00000473969 SERPINA11Q86U17 422 aa12.39□□□□□ -0.43
USF1-205ENST00000473969 POU5F2Q8N7G0 328 aa12.39□□□□□ -0.43
USF1-205ENST00000473969 FAM71CQ8NEG0 241 aa12.39□□□□□ -0.43
USF1-205ENST00000473969 BHLHE22Q8NFJ8 381 aaPredicted RBP12.39□□□□□ -0.43
USF1-205ENST00000473969 TNIP2Q8NFZ5 429 aa12.39□□□□□ -0.43
USF1-205ENST00000473969 OR8J3Q8NGG0 315 aa12.39□□□□□ -0.43
USF1-205ENST00000473969 OR10A6Q8NH74 314 aa12.39□□□□□ -0.43
USF1-205ENST00000473969 OR2V1Q8NHB1 315 aa12.39□□□□□ -0.43
USF1-205ENST00000473969 MBD3L2Q8NHZ7 208 aaPredicted RBP12.39□□□□□ -0.43
USF1-205ENST00000473969 POC1BQ8TC44 478 aa12.39□□□□□ -0.43
USF1-205ENST00000473969 KLHL15Q96M94 604 aa12.39□□□□□ -0.43
USF1-205ENST00000473969 UCN2Q96RP3 112 aa12.39□□□□□ -0.43
USF1-205ENST00000473969 CCDC106Q9BWC9 280 aa12.39□□□□□ -0.43
USF1-205ENST00000473969 IKZF5Q9H5V7 419 aa12.39□□□□□ -0.43
USF1-205ENST00000473969 NANOGQ9H9S0 305 aa12.39□□□□□ -0.43
USF1-205ENST00000473969 EFCAB1Q9HAE3 211 aa12.39□□□□□ -0.43
USF1-205ENST00000473969 KLHL28Q9NXS3 571 aa12.39□□□□□ -0.43
USF1-205ENST00000473969 DNAJB12Q9NXW2 375 aaKnown RBP12.39□□□□□ -0.43
USF1-205ENST00000473969 Q9UFV3 132 aa12.39□□□□□ -0.43
USF1-205ENST00000473969 MCTS1Q9ULC4 181 aaKnown RBP12.39□□□□□ -0.43
USF1-205ENST00000473969 AP3M1Q9Y2T2 418 aa12.39□□□□□ -0.43
USF1-205ENST00000473969 LRRK2Q5S007 2527 aa12.39□□□□□ -0.43
USF1-205ENST00000473969 CDHR4A6H8M9 788 aa12.38□□□□□ -0.43
USF1-205ENST00000473969 TNFSF11O14788 317 aa12.38□□□□□ -0.43
USF1-205ENST00000473969 AIM2O14862 343 aa12.38□□□□□ -0.43
USF1-205ENST00000473969 DNAJA2O60884 412 aa12.38□□□□□ -0.43
USF1-205ENST00000473969 DCTN3O75935 186 aa12.38□□□□□ -0.43
USF1-205ENST00000473969 RCBTB2O95199 551 aa12.38□□□□□ -0.43
USF1-205ENST00000473969 FCGR2AP12318 317 aa12.38□□□□□ -0.43
USF1-205ENST00000473969 CTSSP25774 331 aa12.38□□□□□ -0.43
USF1-205ENST00000473969 PSMA4P25789 261 aaKnown RBP12.38□□□□□ -0.43
USF1-205ENST00000473969 FKBP2P26885 142 aaKnown RBP12.38□□□□□ -0.43
USF1-205ENST00000473969 CEACAM8P31997 349 aaPredicted RBP12.38□□□□□ -0.43
USF1-205ENST00000473969 OPRM1P35372 400 aa12.38□□□□□ -0.43
USF1-205ENST00000473969 CARD18P57730 90 aa12.38□□□□□ -0.43
USF1-205ENST00000473969 SLC25A35Q3KQZ1 300 aa12.38□□□□□ -0.43
USF1-205ENST00000473969 TMEM176BQ3YBM2 270 aaPredicted RBP12.38□□□□□ -0.43
USF1-205ENST00000473969 SP5Q6BEB4 398 aaPredicted RBP12.38□□□□□ -0.43
USF1-205ENST00000473969 GTF2IRD2BQ6EKJ0 949 aa12.38□□□□□ -0.43
USF1-205ENST00000473969 C3orf33Q6P1S2 294 aa12.38□□□□□ -0.43
USF1-205ENST00000473969 PLEKHM3Q6ZWE6 761 aa12.38□□□□□ -0.43
USF1-205ENST00000473969 ARPINQ7Z6K5 226 aa12.38□□□□□ -0.43
USF1-205ENST00000473969 GTF2IRD2Q86UP8 949 aa12.38□□□□□ -0.43
USF1-205ENST00000473969 C9orf106Q8NAJ2 232 aa12.38□□□□□ -0.43
USF1-205ENST00000473969 SLC26A7Q8TE54 656 aa12.38□□□□□ -0.43
USF1-205ENST00000473969 SLC25A43Q8WUT9 341 aaPredicted RBP12.38□□□□□ -0.43
USF1-205ENST00000473969 RCN3Q96D15 328 aa12.38□□□□□ -0.43
USF1-205ENST00000473969 NPAS1Q99742 590 aa12.38□□□□□ -0.43
USF1-205ENST00000473969 KLHDC3Q9BQ90 382 aa12.38□□□□□ -0.43
USF1-205ENST00000473969 TRIM8Q9BZR9 551 aa12.38□□□□□ -0.43
USF1-205ENST00000473969 KAT8Q9H7Z6 458 aaKnown RBP12.38□□□□□ -0.43
USF1-205ENST00000473969 RLIMQ9NVW2 624 aa12.38□□□□□ -0.43
USF1-205ENST00000473969 ZNF629Q9UEG4 869 aaPredicted RBP12.38□□□□□ -0.43
USF1-205ENST00000473969 ZNF175Q9Y473 711 aa12.38□□□□□ -0.43
USF1-205ENST00000473969 HECTD1Q9ULT8 2610 aa12.38□□□□□ -0.43
USF1-205ENST00000473969 USP9XQ93008 2570 aaPredicted RBP12.37□□□□□ -0.43
USF1-205ENST00000473969 KDM4EB2RXH2 506 aaPredicted RBP12.37□□□□□ -0.43
USF1-205ENST00000473969 H0YC42 278 aa12.37□□□□□ -0.43
USF1-205ENST00000473969 ADAMDEC1O15204 470 aa12.37□□□□□ -0.43
USF1-205ENST00000473969 CXCL13O43927 109 aa12.37□□□□□ -0.43
USF1-205ENST00000473969 BCAS1O75363 584 aaPredicted RBP12.37□□□□□ -0.43
USF1-205ENST00000473969 GKN3PP0CG01 181 aa12.37□□□□□ -0.43
USF1-205ENST00000473969 TFPIP10646 304 aa12.37□□□□□ -0.43
USF1-205ENST00000473969 BMP5P22003 454 aa12.37□□□□□ -0.43
USF1-205ENST00000473969 AQP1P29972 269 aa12.37□□□□□ -0.43
USF1-205ENST00000473969 PRKAR1BP31321 381 aa12.37□□□□□ -0.43
USF1-205ENST00000473969 TPD52P55327 224 aaPredicted RBP12.37□□□□□ -0.43
USF1-205ENST00000473969 EPS8Q12929 822 aa12.37□□□□□ -0.43
USF1-205ENST00000473969 SELPLGQ14242 412 aa12.37□□□□□ -0.43
USF1-205ENST00000473969 PON3Q15166 354 aa12.37□□□□□ -0.43
USF1-205ENST00000473969 GKAP1Q5VSY0 366 aaPredicted RBP12.37□□□□□ -0.43
USF1-205ENST00000473969 ERICH5Q6P6B1 374 aa12.37□□□□□ -0.43
USF1-205ENST00000473969 SEM1Q6ZVN7 128 aa12.37□□□□□ -0.43
USF1-205ENST00000473969 ADGRE4PQ86SQ3 457 aa12.37□□□□□ -0.43
USF1-205ENST00000473969 PATL1Q86TB9 770 aaKnown RBP12.37□□□□□ -0.43
USF1-205ENST00000473969 GGNQ86UU5 652 aa12.37□□□□□ -0.43
USF1-205ENST00000473969 ARMC8Q8IUR7 673 aa12.37□□□□□ -0.43
USF1-205ENST00000473969 MCEMP1Q8IX19 187 aa12.37□□□□□ -0.43
USF1-205ENST00000473969 OR10D3Q8NH80 312 aa12.37□□□□□ -0.43
USF1-205ENST00000473969 OSTF1Q92882 214 aa12.37□□□□□ -0.43
USF1-205ENST00000473969 INTS12Q96CB8 462 aaKnown RBP12.37□□□□□ -0.43
USF1-205ENST00000473969 LRRC37BQ96QE4 947 aa12.37□□□□□ -0.43
USF1-205ENST00000473969 CCT8L2Q96SF2 557 aa12.37□□□□□ -0.43
USF1-205ENST00000473969 SLC39A3Q9BRY0 314 aa12.37□□□□□ -0.43
USF1-205ENST00000473969 UCK2Q9BZX2 261 aa12.37□□□□□ -0.43
USF1-205ENST00000473969 PIF1Q9H611 641 aa12.37□□□□□ -0.43
USF1-205ENST00000473969 EVA1AQ9H8M9 152 aa12.37□□□□□ -0.43
USF1-205ENST00000473969 CLCF1Q9UBD9 225 aa12.37□□□□□ -0.43
USF1-205ENST00000473969 RPS6KB2Q9UBS0 482 aa12.37□□□□□ -0.43
USF1-205ENST00000473969 A0A0J9YW62 118 aa12.36□□□□□ -0.43
USF1-205ENST00000473969 ETV2O00321 342 aaPredicted RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms