RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 ATP6AP1LQ52LC2 224 aa4.76□□□□□ -1.65
TMEM39A-206ENST00000473684 CARD16Q5EG05 197 aa4.76□□□□□ -1.65
TMEM39A-206ENST00000473684 C1orf185Q5T7R7 199 aa4.76□□□□□ -1.65
TMEM39A-206ENST00000473684 SLC22A10Q63ZE4 541 aa4.76□□□□□ -1.65
TMEM39A-206ENST00000473684 FBXO46Q6PJ61 603 aaPredicted RBP4.76□□□□□ -1.65
TMEM39A-206ENST00000473684 PRSS55Q6UWB4 352 aaPredicted RBP4.76□□□□□ -1.65
TMEM39A-206ENST00000473684 DCXRQ7Z4W1 244 aa4.76□□□□□ -1.65
TMEM39A-206ENST00000473684 TMEM200AQ86VY9 491 aa4.76□□□□□ -1.65
TMEM39A-206ENST00000473684 ZNF283Q8N7M2 679 aa4.76□□□□□ -1.65
TMEM39A-206ENST00000473684 DNAAF1Q8NEP3 725 aa4.76□□□□□ -1.65
TMEM39A-206ENST00000473684 OR2L3Q8NG85 312 aa4.76□□□□□ -1.65
TMEM39A-206ENST00000473684 OR2I1PQ8NGU4 316 aa4.76□□□□□ -1.65
TMEM39A-206ENST00000473684 GNPDA2Q8TDQ7 276 aa4.76□□□□□ -1.65
TMEM39A-206ENST00000473684 FAM120BQ96EK7 910 aaKnown RBP4.76□□□□□ -1.65
TMEM39A-206ENST00000473684 C14orf79Q96F83 325 aa4.76□□□□□ -1.65
TMEM39A-206ENST00000473684 TEAD3Q99594 435 aa4.76□□□□□ -1.65
TMEM39A-206ENST00000473684 OMDQ99983 421 aa4.76□□□□□ -1.65
TMEM39A-206ENST00000473684 PI4K2AQ9BTU6 479 aa4.76□□□□□ -1.65
TMEM39A-206ENST00000473684 CACNG6Q9BXT2 260 aa4.76□□□□□ -1.65
TMEM39A-206ENST00000473684 OR52A5Q9H2C5 316 aa4.76□□□□□ -1.65
TMEM39A-206ENST00000473684 KCNK12Q9HB15 430 aa4.76□□□□□ -1.65
TMEM39A-206ENST00000473684 SEPSECSQ9HD40 501 aaKnown RBP4.76□□□□□ -1.65
TMEM39A-206ENST00000473684 AMBNQ9NP70 447 aa4.76□□□□□ -1.65
TMEM39A-206ENST00000473684 UTS2RQ9UKP6 389 aa4.76□□□□□ -1.65
TMEM39A-206ENST00000473684 SAMD4AQ9UPU9 718 aaKnown RBP4.76□□□□□ -1.65
TMEM39A-206ENST00000473684 POFUT2Q9Y2G5 429 aa4.76□□□□□ -1.65
TMEM39A-206ENST00000473684 KCTD3Q9Y597 815 aa4.76□□□□□ -1.65
TMEM39A-206ENST00000473684 FAM220BPB1ANY3 271 aa4.76□□□□□ -1.65
TMEM39A-206ENST00000473684 SEC14L6B5MCN3 397 aa4.76□□□□□ -1.65
TMEM39A-206ENST00000473684 TRDCB7Z8K6 153 aa4.76□□□□□ -1.65
TMEM39A-206ENST00000473684 C9JVG2 144 aa4.76□□□□□ -1.65
TMEM39A-206ENST00000473684 ZNF593O00488 134 aaPredicted RBP4.76□□□□□ -1.65
TMEM39A-206ENST00000473684 CACNG3O60359 315 aa4.76□□□□□ -1.65
TMEM39A-206ENST00000473684 CTNSO60931 367 aa4.76□□□□□ -1.65
TMEM39A-206ENST00000473684 GGCTO75223 188 aaKnown RBP4.76□□□□□ -1.65
TMEM39A-206ENST00000473684 F10P00742 488 aa4.76□□□□□ -1.65
TMEM39A-206ENST00000473684 PIGRP01833 764 aa4.76□□□□□ -1.65
TMEM39A-206ENST00000473684 CLTBP09497 229 aa4.76□□□□□ -1.65
TMEM39A-206ENST00000473684 ALPIP09923 528 aa4.76□□□□□ -1.65
TMEM39A-206ENST00000473684 BMP7P18075 431 aa4.76□□□□□ -1.65
TMEM39A-206ENST00000473684 MPGP29372 298 aa4.76□□□□□ -1.65
TMEM39A-206ENST00000473684 RBMS1P29558 406 aaKnown RBP4.76□□□□□ -1.65
TMEM39A-206ENST00000473684 CCR4P51679 360 aa4.76□□□□□ -1.65
TMEM39A-206ENST00000473684 NRG3P56975 720 aa4.76□□□□□ -1.65
TMEM39A-206ENST00000473684 SRSF3P84103 164 aaKnown RBP4.76□□□□□ -1.65
TMEM39A-206ENST00000473684 ACSM1Q08AH1 577 aa4.76□□□□□ -1.65
TMEM39A-206ENST00000473684 IL10RAQ13651 578 aa4.76□□□□□ -1.65
TMEM39A-206ENST00000473684 CERCAMQ5T4B2 595 aa4.76□□□□□ -1.65
TMEM39A-206ENST00000473684 SZRD1Q7Z422 152 aa4.76□□□□□ -1.65
TMEM39A-206ENST00000473684 KLHDC8BQ8IXV7 354 aa4.76□□□□□ -1.65
TMEM39A-206ENST00000473684 CCDC54Q8NEL0 328 aa4.76□□□□□ -1.65
TMEM39A-206ENST00000473684 PROKR2Q8NFJ6 384 aa4.76□□□□□ -1.65
TMEM39A-206ENST00000473684 OR6J1Q8NGC5 347 aa4.76□□□□□ -1.65
TMEM39A-206ENST00000473684 CRYGNQ8WXF5 182 aa4.76□□□□□ -1.65
TMEM39A-206ENST00000473684 TNFRSF14Q92956 283 aa4.76□□□□□ -1.65
TMEM39A-206ENST00000473684 TM4SF18Q96CE8 201 aa4.76□□□□□ -1.65
TMEM39A-206ENST00000473684 PPM1MQ96MI6 270 aa4.76□□□□□ -1.65
TMEM39A-206ENST00000473684 EPYCQ99645 322 aa4.76□□□□□ -1.65
TMEM39A-206ENST00000473684 BARD1Q99728 777 aaKnown RBP4.76□□□□□ -1.65
TMEM39A-206ENST00000473684 MXRA8Q9BRK3 442 aa4.76□□□□□ -1.65
TMEM39A-206ENST00000473684 ZNF670Q9BS34 389 aa4.76□□□□□ -1.65
TMEM39A-206ENST00000473684 REEP1Q9H902 201 aa4.76□□□□□ -1.65
TMEM39A-206ENST00000473684 SARS2Q9NP81 518 aaKnown RBP4.76□□□□□ -1.65
TMEM39A-206ENST00000473684 NT5MQ9NPB1 228 aa4.76□□□□□ -1.65
TMEM39A-206ENST00000473684 TMEM248Q9NWD8 314 aa4.76□□□□□ -1.65
TMEM39A-206ENST00000473684 MS4A12Q9NXJ0 267 aa4.76□□□□□ -1.65
TMEM39A-206ENST00000473684 MGAT4CQ9UBM8 478 aa4.76□□□□□ -1.65
TMEM39A-206ENST00000473684 CFAP20Q9Y6A4 193 aaKnown RBP4.76□□□□□ -1.65
TMEM39A-206ENST00000473684 MICAL3Q7RTP6 2002 aa4.76□□□□□ -1.65
TMEM39A-206ENST00000473684 TBC1D3KA0A087X1G2 549 aa4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 TBC1D3FA6NER0 549 aaPredicted RBP4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 ACKR2O00590 384 aa4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 UBFD1O14562 309 aaKnown RBP4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 ARPC5O15511 151 aa4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 CRCPO75575 148 aa4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 AP2A1O95782 977 aa4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 VIPP01282 170 aa4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 ZNF35P13682 527 aa4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 ERCC2P18074 760 aa4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 NDUFS1P28331 727 aa4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 OR1E1P30953 314 aa4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 FGF9P31371 208 aaPredicted RBP4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 CD200P41217 278 aa4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 SOX3P41225 446 aa4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 GLP1RP43220 463 aa4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 RFX3P48380 749 aa4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 CSNK1DP48730 415 aa4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 MRPS10P82664 201 aaKnown RBP4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 SORDQ00796 357 aa4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 TMEM244Q5VVB8 128 aa4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 NSUN5P2Q63ZY6 315 aa4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 TMEM200BQ69YZ2 307 aa4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 ABLIM2Q6H8Q1 611 aa4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 ETFRF1Q6IPR1 90 aa4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 MED27Q6P2C8 311 aa4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 SLC36A4Q6YBV0 504 aa4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 QSOX2Q6ZRP7 698 aa4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 ASB18Q6ZVZ8 466 aa4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 ARMCX2Q7L311 632 aa4.75□□□□□ -1.65
TMEM39A-206ENST00000473684 SLC16A14Q7RTX9 510 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms