RNA–Protein interactions for RNA: ENST00000473066.5

MRPL55-226, Transcript of mitochondrial ribosomal protein L55, human

TSL 3

Gene MRPL55, Length 820 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-226	ENST00000473066	RYK	P34925	604 aa		13.96	□□□□□ -0.17
MRPL55-226	ENST00000473066	CRAT	P43155	626 aa		13.96	□□□□□ -0.17
MRPL55-226	ENST00000473066	PCYT1A	P49585	367 aa		13.96	□□□□□ -0.17
MRPL55-226	ENST00000473066	AQP5	P55064	265 aa		13.96	□□□□□ -0.17
MRPL55-226	ENST00000473066	DSTN	P60981	165 aa		13.96	□□□□□ -0.17
MRPL55-226	ENST00000473066	RNPS1	Q15287	305 aa	Known RBP	13.96	□□□□□ -0.17
MRPL55-226	ENST00000473066	MAPK14	Q16539	360 aa		13.96	□□□□□ -0.17
MRPL55-226	ENST00000473066	SYPL1	Q16563	259 aa		13.96	□□□□□ -0.17
MRPL55-226	ENST00000473066	EXOC3L2	Q2M3D2	409 aa		13.96	□□□□□ -0.17
MRPL55-226	ENST00000473066	TMEM201	Q5SNT2	666 aa		13.96	□□□□□ -0.17
MRPL55-226	ENST00000473066	CMIP	Q8IY22	773 aa		13.96	□□□□□ -0.17
MRPL55-226	ENST00000473066	PEX5L	Q8IYB4	626 aa		13.96	□□□□□ -0.17
MRPL55-226	ENST00000473066	ANKFN1	Q8N957	763 aa		13.96	□□□□□ -0.17
MRPL55-226	ENST00000473066	SLC25A43	Q8WUT9	341 aa	Predicted RBP	13.96	□□□□□ -0.17
MRPL55-226	ENST00000473066	MED18	Q9BUE0	208 aa		13.96	□□□□□ -0.17
MRPL55-226	ENST00000473066	TPT1P8	Q9HAU6	139 aa		13.96	□□□□□ -0.17
MRPL55-226	ENST00000473066	EXOSC3	Q9NQT5	275 aa	Known RBP	13.96	□□□□□ -0.17
MRPL55-226	ENST00000473066	THUMPD1	Q9NXG2	353 aa	Known RBP	13.96	□□□□□ -0.17
MRPL55-226	ENST00000473066	NR5A2	O00482	541 aa		13.95	□□□□□ -0.18
MRPL55-226	ENST00000473066	NTN1	O95631	604 aa		13.95	□□□□□ -0.18
MRPL55-226	ENST00000473066	DBI	P07108	87 aa	Known RBP	13.95	□□□□□ -0.18
MRPL55-226	ENST00000473066	CHRM4	P08173	479 aa		13.95	□□□□□ -0.18
MRPL55-226	ENST00000473066	PGM1	P36871	562 aa		13.95	□□□□□ -0.18
MRPL55-226	ENST00000473066	IDH3A	P50213	366 aa		13.95	□□□□□ -0.18
MRPL55-226	ENST00000473066	CRISP3	P54108	245 aa		13.95	□□□□□ -0.18
MRPL55-226	ENST00000473066	SESN3	P58005	492 aa		13.95	□□□□□ -0.18
MRPL55-226	ENST00000473066	IRX1	P78414	480 aa	Predicted RBP	13.95	□□□□□ -0.18
MRPL55-226	ENST00000473066	KCNJ10	P78508	379 aa		13.95	□□□□□ -0.18
MRPL55-226	ENST00000473066	FAM27E3	Q08E93	113 aa		13.95	□□□□□ -0.18
MRPL55-226	ENST00000473066	GUSBP1	Q15486	140 aa		13.95	□□□□□ -0.18
MRPL55-226	ENST00000473066	COX20	Q5RI15	118 aa		13.95	□□□□□ -0.18
MRPL55-226	ENST00000473066	FCRLA	Q7L513	359 aa		13.95	□□□□□ -0.18
MRPL55-226	ENST00000473066	HMGN2P46	Q86SG4	172 aa		13.95	□□□□□ -0.18
MRPL55-226	ENST00000473066	CDC20B	Q86Y33	519 aa		13.95	□□□□□ -0.18
MRPL55-226	ENST00000473066	ZNF610	Q8N9Z0	462 aa		13.95	□□□□□ -0.18
MRPL55-226	ENST00000473066	FAM71C	Q8NEG0	241 aa		13.95	□□□□□ -0.18
MRPL55-226	ENST00000473066	RNF128	Q8TEB7	428 aa		13.95	□□□□□ -0.18
MRPL55-226	ENST00000473066	ROBO4	Q8WZ75	1007 aa		13.95	□□□□□ -0.18
MRPL55-226	ENST00000473066	PMM1	Q92871	262 aa		13.95	□□□□□ -0.18
MRPL55-226	ENST00000473066	VPS33A	Q96AX1	596 aa		13.95	□□□□□ -0.18
MRPL55-226	ENST00000473066	ZHX1-C8orf76	Q96EF9	292 aa		13.95	□□□□□ -0.18
MRPL55-226	ENST00000473066	MAGEB18	Q96M61	343 aa		13.95	□□□□□ -0.18
MRPL55-226	ENST00000473066	OR5B2	Q96R09	309 aa		13.95	□□□□□ -0.18
MRPL55-226	ENST00000473066	TACO1	Q9BSH4	297 aa	Known RBP	13.95	□□□□□ -0.18
MRPL55-226	ENST00000473066	QRSL1	Q9H0R6	528 aa	Known RBP	13.95	□□□□□ -0.18
MRPL55-226	ENST00000473066	SLC38A1	Q9H2H9	487 aa		13.95	□□□□□ -0.18
MRPL55-226	ENST00000473066	COQ10B	Q9H8M1	238 aa		13.95	□□□□□ -0.18
MRPL55-226	ENST00000473066	ACER3	Q9NUN7	267 aa		13.95	□□□□□ -0.18
MRPL55-226	ENST00000473066	ZNF226	Q9NYT6	803 aa		13.95	□□□□□ -0.18
MRPL55-226	ENST00000473066	TESMIN	Q9Y4I5	508 aa		13.95	□□□□□ -0.18
MRPL55-226	ENST00000473066		A0A1W2PNR3	127 aa		13.94	□□□□□ -0.18
MRPL55-226	ENST00000473066	AGAP5	A6NIR3	686 aa		13.94	□□□□□ -0.18
MRPL55-226	ENST00000473066	C16orf97	H3BN30	126 aa		13.94	□□□□□ -0.18
MRPL55-226	ENST00000473066	ETV2	O00321	342 aa	Predicted RBP	13.94	□□□□□ -0.18
MRPL55-226	ENST00000473066	CGA	P01215	116 aa		13.94	□□□□□ -0.18
MRPL55-226	ENST00000473066	BCHE	P06276	602 aa		13.94	□□□□□ -0.18
MRPL55-226	ENST00000473066	TFPI	P10646	304 aa		13.94	□□□□□ -0.18
MRPL55-226	ENST00000473066	ETFA	P13804	333 aa		13.94	□□□□□ -0.18
MRPL55-226	ENST00000473066	DNASE1	P24855	282 aa		13.94	□□□□□ -0.18
MRPL55-226	ENST00000473066	AGTR1	P30556	359 aa		13.94	□□□□□ -0.18
MRPL55-226	ENST00000473066	DNAJA1	P31689	397 aa	Known RBP	13.94	□□□□□ -0.18
MRPL55-226	ENST00000473066	CSNK2A1	P68400	391 aa	Predicted RBP	13.94	□□□□□ -0.18
MRPL55-226	ENST00000473066	ZNF474	Q6S9Z5	364 aa	Predicted RBP	13.94	□□□□□ -0.18
MRPL55-226	ENST00000473066	BEND4	Q6ZU67	534 aa		13.94	□□□□□ -0.18
MRPL55-226	ENST00000473066	PLEKHM3	Q6ZWE6	761 aa		13.94	□□□□□ -0.18
MRPL55-226	ENST00000473066	GRINA	Q7Z429	371 aa		13.94	□□□□□ -0.18
MRPL55-226	ENST00000473066	SLC43A2	Q8N370	569 aa		13.94	□□□□□ -0.18
MRPL55-226	ENST00000473066	ABHD3	Q8WU67	409 aa		13.94	□□□□□ -0.18
MRPL55-226	ENST00000473066	CKAP2	Q8WWK9	683 aa		13.94	□□□□□ -0.18
MRPL55-226	ENST00000473066	NRGN	Q92686	78 aa		13.94	□□□□□ -0.18
MRPL55-226	ENST00000473066	EBF4	Q9BQW3	602 aa		13.94	□□□□□ -0.18
MRPL55-226	ENST00000473066	SRXN1	Q9BYN0	137 aa		13.94	□□□□□ -0.18
MRPL55-226	ENST00000473066	KLHL4	Q9C0H6	718 aa		13.94	□□□□□ -0.18
MRPL55-226	ENST00000473066	C12orf49	Q9H741	205 aa		13.94	□□□□□ -0.18
MRPL55-226	ENST00000473066	MTHFD2L	Q9H903	347 aa	Predicted RBP	13.94	□□□□□ -0.18
MRPL55-226	ENST00000473066	KLHL28	Q9NXS3	571 aa		13.94	□□□□□ -0.18
MRPL55-226	ENST00000473066	KLHL9	Q9P2J3	617 aa		13.94	□□□□□ -0.18
MRPL55-226	ENST00000473066	FREM1	Q5H8C1	2179 aa		13.93	□□□□□ -0.18
MRPL55-226	ENST00000473066	PRAMEF27	A3QJZ7	478 aa		13.93	□□□□□ -0.18
MRPL55-226	ENST00000473066	FAM221A	A4D161	298 aa		13.93	□□□□□ -0.18
MRPL55-226	ENST00000473066	EFNA2	O43921	213 aa		13.93	□□□□□ -0.18
MRPL55-226	ENST00000473066	DNAJA2	O60884	412 aa		13.93	□□□□□ -0.18
MRPL55-226	ENST00000473066	PRKD3	O94806	890 aa		13.93	□□□□□ -0.18
MRPL55-226	ENST00000473066	C1QC	P02747	245 aa		13.93	□□□□□ -0.18
MRPL55-226	ENST00000473066	ENPP1	P22413	925 aa		13.93	□□□□□ -0.18
MRPL55-226	ENST00000473066	UGT2B10	P36537	528 aa		13.93	□□□□□ -0.18
MRPL55-226	ENST00000473066	APOBEC1	P41238	236 aa	Known RBP	13.93	□□□□□ -0.18
MRPL55-226	ENST00000473066	HTR3A	P46098	478 aa		13.93	□□□□□ -0.18
MRPL55-226	ENST00000473066	MRPL19	P49406	292 aa	Known RBP	13.93	□□□□□ -0.18
MRPL55-226	ENST00000473066	RAC3	P60763	192 aa		13.93	□□□□□ -0.18
MRPL55-226	ENST00000473066	SQLE	Q14534	574 aa		13.93	□□□□□ -0.18
MRPL55-226	ENST00000473066	POU4F3	Q15319	338 aa		13.93	□□□□□ -0.18
MRPL55-226	ENST00000473066	GTDC1	Q4AE62	458 aa		13.93	□□□□□ -0.18
MRPL55-226	ENST00000473066	LIN52	Q52LA3	116 aa		13.93	□□□□□ -0.18
MRPL55-226	ENST00000473066	SYT14P1	Q58G82	188 aa		13.93	□□□□□ -0.18
MRPL55-226	ENST00000473066	SLC2A7	Q6PXP3	512 aa		13.93	□□□□□ -0.18
MRPL55-226	ENST00000473066	ZNF440	Q8IYI8	595 aa		13.93	□□□□□ -0.18
MRPL55-226	ENST00000473066	CNOT9	Q92600	299 aa	Known RBP	13.93	□□□□□ -0.18
MRPL55-226	ENST00000473066	NINJ1	Q92982	152 aa		13.93	□□□□□ -0.18
MRPL55-226	ENST00000473066	SPDL1	Q96EA4	605 aa		13.93	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms