RNA–Protein interactions for RNA: ENST00000471572.6

NF1-208, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 2,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-208ENST00000471572 CATSPERDQ86XM0 798 aa5.27□□□□□ -1.57
NF1-208ENST00000471572 OR9G4Q8NGQ1 327 aa5.27□□□□□ -1.57
NF1-208ENST00000471572 OR4C3Q8NH37 302 aa5.27□□□□□ -1.57
NF1-208ENST00000471572 MPLKIPQ8TAP9 179 aa5.27□□□□□ -1.57
NF1-208ENST00000471572 MAGEE2Q8TD90 523 aaPredicted RBP5.27□□□□□ -1.57
NF1-208ENST00000471572 OMA1Q96E52 524 aa5.27□□□□□ -1.57
NF1-208ENST00000471572 NAF1Q96HR8 494 aaKnown RBP5.27□□□□□ -1.57
NF1-208ENST00000471572 FAM218AQ96MZ4 157 aa5.27□□□□□ -1.57
NF1-208ENST00000471572 PRRG3Q9BZD7 231 aa5.27□□□□□ -1.57
NF1-208ENST00000471572 IL25Q9H293 177 aa5.27□□□□□ -1.57
NF1-208ENST00000471572 UBE2TQ9NPD8 197 aaPredicted RBP5.27□□□□□ -1.57
NF1-208ENST00000471572 PNO1Q9NRX1 252 aaKnown RBP5.27□□□□□ -1.57
NF1-208ENST00000471572 NUDT15Q9NV35 164 aa5.27□□□□□ -1.57
NF1-208ENST00000471572 CYTH4Q9UIA0 394 aa5.27□□□□□ -1.57
NF1-208ENST00000471572 EXOSC1Q9Y3B2 195 aaKnown RBP5.27□□□□□ -1.57
NF1-208ENST00000471572 HS3ST3B1Q9Y662 390 aa5.27□□□□□ -1.57
NF1-208ENST00000471572 WNK3Q9BYP7 1800 aa5.27□□□□□ -1.57
NF1-208ENST00000471572 ERICH2A1L162 156 aa5.26□□□□□ -1.57
NF1-208ENST00000471572 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP5.26□□□□□ -1.57
NF1-208ENST00000471572 SIVA1O15304 175 aa5.26□□□□□ -1.57
NF1-208ENST00000471572 SH3BGRLO75368 114 aa5.26□□□□□ -1.57
NF1-208ENST00000471572 APOA1P02647 267 aa5.26□□□□□ -1.57
NF1-208ENST00000471572 P04436 131 aa5.26□□□□□ -1.57
NF1-208ENST00000471572 GPIP06744 558 aa5.26□□□□□ -1.57
NF1-208ENST00000471572 ZNF12P17014 697 aa5.26□□□□□ -1.57
NF1-208ENST00000471572 STOMP27105 288 aa5.26□□□□□ -1.57
NF1-208ENST00000471572 HOXD3P31249 432 aaPredicted RBP5.26□□□□□ -1.57
NF1-208ENST00000471572 RPL13AP40429 203 aaKnown RBP5.26□□□□□ -1.57
NF1-208ENST00000471572 MAP3K7CLP57077 242 aa5.26□□□□□ -1.57
NF1-208ENST00000471572 NTHL1P78549 312 aa5.26□□□□□ -1.57
NF1-208ENST00000471572 POU3F1Q03052 451 aaPredicted RBP5.26□□□□□ -1.57
NF1-208ENST00000471572 COTL1Q14019 142 aa5.26□□□□□ -1.57
NF1-208ENST00000471572 LY6G6FQ5SQ64 297 aa5.26□□□□□ -1.57
NF1-208ENST00000471572 DBX2Q6ZNG2 339 aa5.26□□□□□ -1.57
NF1-208ENST00000471572 GCNT7Q6ZNI0 430 aa5.26□□□□□ -1.57
NF1-208ENST00000471572 TRPV1Q8NER1 839 aa5.26□□□□□ -1.57
NF1-208ENST00000471572 NUDCD2Q8WVJ2 157 aa5.26□□□□□ -1.57
NF1-208ENST00000471572 TMED6Q8WW62 240 aa5.26□□□□□ -1.57
NF1-208ENST00000471572 KIFAP3Q92845 792 aa5.26□□□□□ -1.57
NF1-208ENST00000471572 C8orf76Q96K31 380 aa5.26□□□□□ -1.57
NF1-208ENST00000471572 TMEM246Q9BRR3 403 aa5.26□□□□□ -1.57
NF1-208ENST00000471572 PAPOLGQ9BWT3 736 aaKnown RBP5.26□□□□□ -1.57
NF1-208ENST00000471572 UGT1A10Q9HAW8 530 aa5.26□□□□□ -1.57
NF1-208ENST00000471572 ALG6Q9Y672 507 aa5.26□□□□□ -1.57
NF1-208ENST00000471572 COL3A1P02461 1466 aaPredicted RBP5.26□□□□□ -1.57
NF1-208ENST00000471572 IGLV5-37A0A075B6J1 123 aa5.26□□□□□ -1.57
NF1-208ENST00000471572 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP5.26□□□□□ -1.57
NF1-208ENST00000471572 A8MXQ7 604 aa5.26□□□□□ -1.57
NF1-208ENST00000471572 HIP1O00291 1037 aa5.26□□□□□ -1.57
NF1-208ENST00000471572 CYB561D2O14569 222 aa5.26□□□□□ -1.57
NF1-208ENST00000471572 ZNF195O14628 629 aa5.26□□□□□ -1.57
NF1-208ENST00000471572 TM9SF1O15321 606 aa5.26□□□□□ -1.57
NF1-208ENST00000471572 MSH4O15457 936 aa5.26□□□□□ -1.57
NF1-208ENST00000471572 CLOCKO15516 846 aa5.26□□□□□ -1.57
NF1-208ENST00000471572 PROP1O75360 226 aa5.26□□□□□ -1.57
NF1-208ENST00000471572 CBR3O75828 277 aa5.26□□□□□ -1.57
NF1-208ENST00000471572 SCELO95171 688 aa5.26□□□□□ -1.57
NF1-208ENST00000471572 IGHV4-39P01824 125 aa5.26□□□□□ -1.57
NF1-208ENST00000471572 NR3C1P04150 777 aa5.26□□□□□ -1.57
NF1-208ENST00000471572 SERPIND1P05546 499 aa5.26□□□□□ -1.57
NF1-208ENST00000471572 H2BFMP0C1H6 154 aa5.26□□□□□ -1.57
NF1-208ENST00000471572 ZNF43P17038 809 aa5.26□□□□□ -1.57
NF1-208ENST00000471572 CCKBRP32239 447 aa5.26□□□□□ -1.57
NF1-208ENST00000471572 MMP12P39900 470 aa5.26□□□□□ -1.57
NF1-208ENST00000471572 SLC26A2P50443 739 aa5.26□□□□□ -1.57
NF1-208ENST00000471572 CSNK2BP67870 215 aa5.26□□□□□ -1.57
NF1-208ENST00000471572 RGS1Q08116 209 aa5.26□□□□□ -1.57
NF1-208ENST00000471572 ZNF177Q13360 481 aaPredicted RBP5.26□□□□□ -1.57
NF1-208ENST00000471572 RBMS2Q15434 407 aaKnown RBP5.26□□□□□ -1.57
NF1-208ENST00000471572 DMRTC1Q5HYR2 192 aa5.26□□□□□ -1.57
NF1-208ENST00000471572 DDI2Q5TDH0 399 aa5.26□□□□□ -1.57
NF1-208ENST00000471572 TWF2Q6IBS0 349 aaKnown RBP5.26□□□□□ -1.57
NF1-208ENST00000471572 ADAMTSL5Q6ZMM2 481 aa5.26□□□□□ -1.57
NF1-208ENST00000471572 ERI1Q8IV48 349 aaKnown RBP5.26□□□□□ -1.57
NF1-208ENST00000471572 FAM58AQ8N1B3 248 aa5.26□□□□□ -1.57
NF1-208ENST00000471572 CATSPER1Q8NEC5 780 aa5.26□□□□□ -1.57
NF1-208ENST00000471572 PDCD6IPQ8WUM4 868 aaKnown RBP5.26□□□□□ -1.57
NF1-208ENST00000471572 ACBD6Q9BR61 282 aa5.26□□□□□ -1.57
NF1-208ENST00000471572 RBM4Q9BWF3 364 aaKnown RBP5.26□□□□□ -1.57
NF1-208ENST00000471572 HIPK2Q9H2X6 1198 aa5.26□□□□□ -1.57
NF1-208ENST00000471572 POPDC2Q9HBU9 364 aa5.26□□□□□ -1.57
NF1-208ENST00000471572 CCNB1IP1Q9NPC3 277 aa5.26□□□□□ -1.57
NF1-208ENST00000471572 AK6Q9Y3D8 172 aaKnown RBP5.26□□□□□ -1.57
NF1-208ENST00000471572 RGPD3A6NKT7 1758 aaPredicted RBP5.26□□□□□ -1.57
NF1-208ENST00000471572 RGPD4Q7Z3J3 1758 aa5.26□□□□□ -1.57
NF1-208ENST00000471572 RGPD5Q99666 1765 aa5.26□□□□□ -1.57
NF1-208ENST00000471572 MROH7-TTC4A0A0A0MT08 1334 aa5.25□□□□□ -1.57
NF1-208ENST00000471572 hCG_38984A0A1B0GV85 526 aa5.25□□□□□ -1.57
NF1-208ENST00000471572 ZNF99A8MXY4 864 aaPredicted RBP5.25□□□□□ -1.57
NF1-208ENST00000471572 TMEM50AO95807 157 aa5.25□□□□□ -1.57
NF1-208ENST00000471572 ZNF853P0CG23 659 aa5.25□□□□□ -1.57
NF1-208ENST00000471572 CCL2P13500 99 aa5.25□□□□□ -1.57
NF1-208ENST00000471572 RPL35AP18077 110 aaKnown RBP5.25□□□□□ -1.57
NF1-208ENST00000471572 AADACP22760 399 aa5.25□□□□□ -1.57
NF1-208ENST00000471572 SOX3P41225 446 aa5.25□□□□□ -1.57
NF1-208ENST00000471572 GYG1P46976 350 aa5.25□□□□□ -1.57
NF1-208ENST00000471572 UQCRFS1P47985 274 aa5.25□□□□□ -1.57
NF1-208ENST00000471572 CTAG1AP78358 180 aa5.25□□□□□ -1.57
NF1-208ENST00000471572 GPR17Q13304 367 aa5.25□□□□□ -1.57
NF1-208ENST00000471572 FASTKD3Q14CZ7 662 aaKnown RBP5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms