RNA–Protein interactions for RNA: ENST00000471342.1

SF3A1-207, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-207ENST00000471342 IDH2P48735 452 aaKnown RBP8.94□□□□□ -0.98
SF3A1-207ENST00000471342 MEOX1P50221 254 aa8.94□□□□□ -0.98
SF3A1-207ENST00000471342 P2RY4P51582 365 aa8.94□□□□□ -0.98
SF3A1-207ENST00000471342 TDGF1P3P51864 188 aa8.94□□□□□ -0.98
SF3A1-207ENST00000471342 UGT2B15P54855 530 aa8.94□□□□□ -0.98
SF3A1-207ENST00000471342 FOXF1Q12946 379 aa8.94□□□□□ -0.98
SF3A1-207ENST00000471342 LAPTM4AQ15012 233 aa8.94□□□□□ -0.98
SF3A1-207ENST00000471342 ZSWIM7Q19AV6 140 aa8.94□□□□□ -0.98
SF3A1-207ENST00000471342 EIPR1Q53HC9 387 aa8.94□□□□□ -0.98
SF3A1-207ENST00000471342 COLEC12Q5KU26 742 aa8.94□□□□□ -0.98
SF3A1-207ENST00000471342 TBCELQ5QJ74 424 aa8.94□□□□□ -0.98
SF3A1-207ENST00000471342 DCST1Q5T197 706 aa8.94□□□□□ -0.98
SF3A1-207ENST00000471342 PODNL1Q6PEZ8 512 aa8.94□□□□□ -0.98
SF3A1-207ENST00000471342 ZNF613Q6PF04 617 aa8.94□□□□□ -0.98
SF3A1-207ENST00000471342 WDFY1Q8IWB7 410 aa8.94□□□□□ -0.98
SF3A1-207ENST00000471342 OR5M1Q8NGP8 315 aa8.94□□□□□ -0.98
SF3A1-207ENST00000471342 SLC26A7Q8TE54 656 aa8.94□□□□□ -0.98
SF3A1-207ENST00000471342 RASSF5Q8WWW0 418 aa8.94□□□□□ -0.98
SF3A1-207ENST00000471342 SLC41A3Q96GZ6 507 aa8.94□□□□□ -0.98
SF3A1-207ENST00000471342 BBC3Q96PG8 261 aaPredicted RBP8.94□□□□□ -0.98
SF3A1-207ENST00000471342 PIP5K1AQ99755 562 aa8.94□□□□□ -0.98
SF3A1-207ENST00000471342 PSD2Q9BQI7 771 aa8.94□□□□□ -0.98
SF3A1-207ENST00000471342 TBL1XR1Q9BZK7 514 aa8.94□□□□□ -0.98
SF3A1-207ENST00000471342 METTL7AQ9H8H3 244 aa8.94□□□□□ -0.98
SF3A1-207ENST00000471342 EVA1AQ9H8M9 152 aa8.94□□□□□ -0.98
SF3A1-207ENST00000471342 TIMMDC1Q9NPL8 285 aa8.94□□□□□ -0.98
SF3A1-207ENST00000471342 STX18Q9P2W9 335 aaKnown RBP8.94□□□□□ -0.98
SF3A1-207ENST00000471342 TESQ9UGI8 421 aaKnown RBP8.94□□□□□ -0.98
SF3A1-207ENST00000471342 TMEFF2Q9UIK5 374 aaPredicted RBP8.94□□□□□ -0.98
SF3A1-207ENST00000471342 MED12Q93074 2177 aa8.94□□□□□ -0.98
SF3A1-207ENST00000471342 EPG5Q9HCE0 2579 aa8.94□□□□□ -0.98
SF3A1-207ENST00000471342 KMT2BQ9UMN6 2715 aaPredicted RBP8.94□□□□□ -0.98
SF3A1-207ENST00000471342 PIEZO2Q9H5I5 2752 aa8.94□□□□□ -0.98
SF3A1-207ENST00000471342 RELNP78509 3460 aa8.93□□□□□ -0.98
SF3A1-207ENST00000471342 A0A1B0GVC2 190 aa8.93□□□□□ -0.98
SF3A1-207ENST00000471342 TMEM72A0PK05 275 aa8.93□□□□□ -0.98
SF3A1-207ENST00000471342 SH3PXD2BA1X283 911 aa8.93□□□□□ -0.98
SF3A1-207ENST00000471342 TMEM247A6NEH6 219 aa8.93□□□□□ -0.98
SF3A1-207ENST00000471342 H0YC42 278 aa8.93□□□□□ -0.98
SF3A1-207ENST00000471342 CLOCKO15516 846 aa8.93□□□□□ -0.98
SF3A1-207ENST00000471342 ZNHIT1O43257 154 aa8.93□□□□□ -0.98
SF3A1-207ENST00000471342 GMFGO60234 142 aa8.93□□□□□ -0.98
SF3A1-207ENST00000471342 CBR3O75828 277 aa8.93□□□□□ -0.98
SF3A1-207ENST00000471342 CYP7B1O75881 506 aa8.93□□□□□ -0.98
SF3A1-207ENST00000471342 OR5F1O95221 314 aa8.93□□□□□ -0.98
SF3A1-207ENST00000471342 P04436 131 aa8.93□□□□□ -0.98
SF3A1-207ENST00000471342 FABP3P05413 133 aa8.93□□□□□ -0.98
SF3A1-207ENST00000471342 IMPDH2P12268 514 aa8.93□□□□□ -0.98
SF3A1-207ENST00000471342 ANPEPP15144 967 aa8.93□□□□□ -0.98
SF3A1-207ENST00000471342 PRKACGP22612 351 aa8.93□□□□□ -0.98
SF3A1-207ENST00000471342 CBLP22681 906 aa8.93□□□□□ -0.98
SF3A1-207ENST00000471342 ELAVL4P26378 380 aaKnown RBP8.93□□□□□ -0.98
SF3A1-207ENST00000471342 SRD5A2P31213 254 aa8.93□□□□□ -0.98
SF3A1-207ENST00000471342 RRM2P31350 389 aa8.93□□□□□ -0.98
SF3A1-207ENST00000471342 RYKP34925 604 aa8.93□□□□□ -0.98
SF3A1-207ENST00000471342 GCKP35557 465 aa8.93□□□□□ -0.98
SF3A1-207ENST00000471342 KRT20P35900 424 aa8.93□□□□□ -0.98
SF3A1-207ENST00000471342 SUCLG1P53597 346 aaKnown RBP8.93□□□□□ -0.98
SF3A1-207ENST00000471342 TPD52P55327 224 aaPredicted RBP8.93□□□□□ -0.98
SF3A1-207ENST00000471342 ARG2P78540 354 aa8.93□□□□□ -0.98
SF3A1-207ENST00000471342 HPCAP84074 193 aa8.93□□□□□ -0.98
SF3A1-207ENST00000471342 GANABQ14697 944 aaKnown RBP8.93□□□□□ -0.98
SF3A1-207ENST00000471342 ZNF169Q14929 603 aaPredicted RBP8.93□□□□□ -0.98
SF3A1-207ENST00000471342 FAM98BQ52LJ0 330 aaKnown RBP8.93□□□□□ -0.98
SF3A1-207ENST00000471342 PRR30Q53SZ7 412 aaPredicted RBP8.93□□□□□ -0.98
SF3A1-207ENST00000471342 OR2T5Q6IEZ7 315 aa8.93□□□□□ -0.98
SF3A1-207ENST00000471342 ZNF550Q7Z398 422 aa8.93□□□□□ -0.98
SF3A1-207ENST00000471342 PRICKLE2Q7Z3G6 844 aa8.93□□□□□ -0.98
SF3A1-207ENST00000471342 SLC46A3Q7Z3Q1 461 aa8.93□□□□□ -0.98
SF3A1-207ENST00000471342 ZER1Q7Z7L7 766 aa8.93□□□□□ -0.98
SF3A1-207ENST00000471342 GGNQ86UU5 652 aa8.93□□□□□ -0.98
SF3A1-207ENST00000471342 CYP4Z1Q86W10 505 aa8.93□□□□□ -0.98
SF3A1-207ENST00000471342 P3H2Q8IVL5 708 aa8.93□□□□□ -0.98
SF3A1-207ENST00000471342 PQLC1Q8N2U9 271 aa8.93□□□□□ -0.98
SF3A1-207ENST00000471342 GTPBP8Q8N3Z3 284 aaPredicted RBP8.93□□□□□ -0.98
SF3A1-207ENST00000471342 ZNF614Q8N883 585 aa8.93□□□□□ -0.98
SF3A1-207ENST00000471342 FAM83FQ8NEG4 500 aaPredicted RBP8.93□□□□□ -0.98
SF3A1-207ENST00000471342 OR2T29Q8NH02 315 aa8.93□□□□□ -0.98
SF3A1-207ENST00000471342 TMEM255BQ8WV15 326 aa8.93□□□□□ -0.98
SF3A1-207ENST00000471342 PROX1Q92786 737 aa8.93□□□□□ -0.98
SF3A1-207ENST00000471342 ARL5BQ96KC2 179 aa8.93□□□□□ -0.98
SF3A1-207ENST00000471342 UGT2B28Q9BY64 529 aa8.93□□□□□ -0.98
SF3A1-207ENST00000471342 ENKD1Q9H0I2 346 aa8.93□□□□□ -0.98
SF3A1-207ENST00000471342 ADNPQ9H2P0 1102 aa8.93□□□□□ -0.98
SF3A1-207ENST00000471342 RNPEPL1Q9HAU8 725 aa8.93□□□□□ -0.98
SF3A1-207ENST00000471342 ACKR4Q9NPB9 350 aa8.93□□□□□ -0.98
SF3A1-207ENST00000471342 ZNF71Q9NQZ8 489 aaPredicted RBP8.93□□□□□ -0.98
SF3A1-207ENST00000471342 C20orf141Q9NUB4 165 aa8.93□□□□□ -0.98
SF3A1-207ENST00000471342 KLRF1Q9NZS2 232 aa8.93□□□□□ -0.98
SF3A1-207ENST00000471342 SPRR3Q9UBC9 169 aa8.93□□□□□ -0.98
SF3A1-207ENST00000471342 DNAJB9Q9UBS3 223 aa8.93□□□□□ -0.98
SF3A1-207ENST00000471342 PRDM4Q9UKN5 801 aa8.93□□□□□ -0.98
SF3A1-207ENST00000471342 AURKCQ9UQB9 309 aa8.93□□□□□ -0.98
SF3A1-207ENST00000471342 B3GNT3Q9Y2A9 372 aa8.93□□□□□ -0.98
SF3A1-207ENST00000471342 NINQ8N4C6 2090 aa8.93□□□□□ -0.98
SF3A1-207ENST00000471342 TRAV17A0A0B4J275 112 aa8.92□□□□□ -0.98
SF3A1-207ENST00000471342 OR2M5A3KFT3 312 aa8.92□□□□□ -0.98
SF3A1-207ENST00000471342 TRAPPC13A5PLN9 417 aa8.92□□□□□ -0.98
SF3A1-207ENST00000471342 KDM4EB2RXH2 506 aaPredicted RBP8.92□□□□□ -0.98
SF3A1-207ENST00000471342 ZNF814B7Z6K7 855 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms