RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 ANAPC7Q9UJX3 599 aa0.74□□□□□ -2.29
UBXN4-207ENST00000471246 ASF1AQ9Y294 204 aa0.74□□□□□ -2.29
UBXN4-207ENST00000471246 TRANK1O15050 2925 aa0.73□□□□□ -2.29
UBXN4-207ENST00000471246 RPGRIP1LQ68CZ1 1315 aa0.73□□□□□ -2.29
UBXN4-207ENST00000471246 IGHV3OR16-13A0A075B7E8 117 aa0.73□□□□□ -2.29
UBXN4-207ENST00000471246 A0A0G2JRQ6 117 aa0.73□□□□□ -2.29
UBXN4-207ENST00000471246 WASH3PC4AMC7 463 aa0.73□□□□□ -2.29
UBXN4-207ENST00000471246 SULT2B1O00204 365 aa0.73□□□□□ -2.29
UBXN4-207ENST00000471246 DUX1O43812 170 aa0.73□□□□□ -2.29
UBXN4-207ENST00000471246 AIREO43918 545 aa0.73□□□□□ -2.29
UBXN4-207ENST00000471246 TNFSF13O75888 250 aa0.73□□□□□ -2.29
UBXN4-207ENST00000471246 OLFM2O95897 454 aa0.73□□□□□ -2.29
UBXN4-207ENST00000471246 LALBAP00709 142 aa0.73□□□□□ -2.29
UBXN4-207ENST00000471246 ALPPP05187 535 aa0.73□□□□□ -2.29
UBXN4-207ENST00000471246 RETP07949 1114 aa0.73□□□□□ -2.29
UBXN4-207ENST00000471246 HBQ1P09105 142 aa0.73□□□□□ -2.29
UBXN4-207ENST00000471246 GIPP09681 153 aaPredicted RBP0.73□□□□□ -2.29
UBXN4-207ENST00000471246 RBMY1CP0DJD4 496 aa0.73□□□□□ -2.29
UBXN4-207ENST00000471246 UQCRBP14927 111 aa0.73□□□□□ -2.29
UBXN4-207ENST00000471246 AHCYP23526 432 aa0.73□□□□□ -2.29
UBXN4-207ENST00000471246 SFNP31947 248 aa0.73□□□□□ -2.29
UBXN4-207ENST00000471246 CD80P33681 288 aa0.73□□□□□ -2.29
UBXN4-207ENST00000471246 CYLC1P35663 651 aaPredicted RBP0.73□□□□□ -2.29
UBXN4-207ENST00000471246 BDKRB1P46663 353 aa0.73□□□□□ -2.29
UBXN4-207ENST00000471246 KLK7P49862 253 aa0.73□□□□□ -2.29
UBXN4-207ENST00000471246 PLK1P53350 603 aa0.73□□□□□ -2.29
UBXN4-207ENST00000471246 ATXN3P54252 364 aaPredicted RBP0.73□□□□□ -2.29
UBXN4-207ENST00000471246 TAS2R19P59542 299 aa0.73□□□□□ -2.29
UBXN4-207ENST00000471246 SELENOTP62341 195 aa0.73□□□□□ -2.29
UBXN4-207ENST00000471246 NTHL1P78549 312 aa0.73□□□□□ -2.29
UBXN4-207ENST00000471246 CSTF1Q05048 431 aaKnown RBP0.73□□□□□ -2.29
UBXN4-207ENST00000471246 ACTN3Q08043 901 aaPredicted RBP0.73□□□□□ -2.29
UBXN4-207ENST00000471246 CCDC173Q0VFZ6 552 aa0.73□□□□□ -2.29
UBXN4-207ENST00000471246 CUL1Q13616 776 aa0.73□□□□□ -2.29
UBXN4-207ENST00000471246 PDIA5Q14554 519 aa0.73□□□□□ -2.29
UBXN4-207ENST00000471246 ATXN7L3Q14CW9 347 aaPredicted RBP0.73□□□□□ -2.29
UBXN4-207ENST00000471246 FAM83EQ2M2I3 478 aa0.73□□□□□ -2.29
UBXN4-207ENST00000471246 ADPRMQ3LIE5 342 aa0.73□□□□□ -2.29
UBXN4-207ENST00000471246 ABCA11PQ4W5N1 156 aa0.73□□□□□ -2.29
UBXN4-207ENST00000471246 LINC00483Q53H64 154 aa0.73□□□□□ -2.29
UBXN4-207ENST00000471246 PIGGQ5H8A4 983 aa0.73□□□□□ -2.29
UBXN4-207ENST00000471246 C1orf100Q5SVJ3 147 aa0.73□□□□□ -2.29
UBXN4-207ENST00000471246 ACSM5Q6NUN0 579 aa0.73□□□□□ -2.29
UBXN4-207ENST00000471246 FAHD2BQ6P2I3 314 aaPredicted RBP0.73□□□□□ -2.29
UBXN4-207ENST00000471246 WASH2PQ6VEQ5 465 aa0.73□□□□□ -2.29
UBXN4-207ENST00000471246 ANKRD37Q7Z713 158 aa0.73□□□□□ -2.29
UBXN4-207ENST00000471246 RALGPS2Q86X27 583 aaPredicted RBP0.73□□□□□ -2.29
UBXN4-207ENST00000471246 C12orf56Q8IXR9 622 aa0.73□□□□□ -2.29
UBXN4-207ENST00000471246 CYB561D1Q8N8Q1 229 aa0.73□□□□□ -2.29
UBXN4-207ENST00000471246 MINDY2Q8NBR6 621 aa0.73□□□□□ -2.29
UBXN4-207ENST00000471246 SPC24Q8NBT2 197 aa0.73□□□□□ -2.29
UBXN4-207ENST00000471246 DUSP18Q8NEJ0 188 aa0.73□□□□□ -2.29
UBXN4-207ENST00000471246 OR8H1Q8NGG4 311 aa0.73□□□□□ -2.29
UBXN4-207ENST00000471246 OR56B1Q8NGI3 324 aa0.73□□□□□ -2.29
UBXN4-207ENST00000471246 OR51S1Q8NGJ8 323 aa0.73□□□□□ -2.29
UBXN4-207ENST00000471246 OR6X1Q8NH79 312 aa0.73□□□□□ -2.29
UBXN4-207ENST00000471246 AENQ8WTP8 325 aaKnown RBP0.73□□□□□ -2.29
UBXN4-207ENST00000471246 SELENOMQ8WWX9 145 aa0.73□□□□□ -2.29
UBXN4-207ENST00000471246 VMP1Q96GC9 406 aa0.73□□□□□ -2.29
UBXN4-207ENST00000471246 FAHD2AQ96GK7 314 aa0.73□□□□□ -2.29
UBXN4-207ENST00000471246 CEP170P1Q96L14 293 aa0.73□□□□□ -2.29
UBXN4-207ENST00000471246 PGLYRP4Q96LB8 373 aa0.73□□□□□ -2.29
UBXN4-207ENST00000471246 TSNARE1Q96NA8 513 aa0.73□□□□□ -2.29
UBXN4-207ENST00000471246 TSG101Q99816 390 aa0.73□□□□□ -2.29
UBXN4-207ENST00000471246 GAL3ST1Q99999 423 aa0.73□□□□□ -2.29
UBXN4-207ENST00000471246 SLC30A2Q9BRI3 323 aa0.73□□□□□ -2.29
UBXN4-207ENST00000471246 HDHD3Q9BSH5 251 aaPredicted RBP0.73□□□□□ -2.29
UBXN4-207ENST00000471246 TBCDQ9BTW9 1192 aa0.73□□□□□ -2.29
UBXN4-207ENST00000471246 TPK1Q9H3S4 243 aa0.73□□□□□ -2.29
UBXN4-207ENST00000471246 LPAR2Q9HBW0 351 aa0.73□□□□□ -2.29
UBXN4-207ENST00000471246 SYTL2Q9HCH5 934 aa0.73□□□□□ -2.29
UBXN4-207ENST00000471246 ZDHHC4Q9NPG8 344 aa0.73□□□□□ -2.29
UBXN4-207ENST00000471246 LHX9Q9NQ69 397 aa0.73□□□□□ -2.29
UBXN4-207ENST00000471246 ARGLU1Q9NWB6 273 aaPredicted RBP0.73□□□□□ -2.29
UBXN4-207ENST00000471246 MRPL39Q9NYK5 338 aaKnown RBP0.73□□□□□ -2.29
UBXN4-207ENST00000471246 TREM2Q9NZC2 230 aa0.73□□□□□ -2.29
UBXN4-207ENST00000471246 OPN4Q9UHM6 478 aa0.73□□□□□ -2.29
UBXN4-207ENST00000471246 STRAPQ9Y3F4 350 aaKnown RBP0.73□□□□□ -2.29
UBXN4-207ENST00000471246 OARD1Q9Y530 152 aa0.73□□□□□ -2.29
UBXN4-207ENST00000471246 AP4B1Q9Y6B7 739 aa0.73□□□□□ -2.29
UBXN4-207ENST00000471246 SDK2Q58EX2 2172 aa0.73□□□□□ -2.29
UBXN4-207ENST00000471246 PPIAL4EA0A075B759 164 aa0.72□□□□□ -2.29
UBXN4-207ENST00000471246 PPIAL4CA0A0B4J2A2 164 aa0.72□□□□□ -2.29
UBXN4-207ENST00000471246 SYCE3A1L190 88 aa0.72□□□□□ -2.29
UBXN4-207ENST00000471246 CFAP73A6NFT4 308 aa0.72□□□□□ -2.29
UBXN4-207ENST00000471246 SLC9B1P1A6NJY1 282 aa0.72□□□□□ -2.29
UBXN4-207ENST00000471246 VSTM2BA6NLU5 285 aa0.72□□□□□ -2.29
UBXN4-207ENST00000471246 ANKRD30BLA7E2S9 258 aa0.72□□□□□ -2.29
UBXN4-207ENST00000471246 E9PBE3 544 aa0.72□□□□□ -2.29
UBXN4-207ENST00000471246 PPIAL4DF5H284 164 aa0.72□□□□□ -2.29
UBXN4-207ENST00000471246 KIF2AO00139 706 aaPredicted RBP0.72□□□□□ -2.29
UBXN4-207ENST00000471246 STX7O15400 261 aaKnown RBP0.72□□□□□ -2.29
UBXN4-207ENST00000471246 SPAG7O75391 227 aa0.72□□□□□ -2.29
UBXN4-207ENST00000471246 ECI2O75521 394 aa0.72□□□□□ -2.29
UBXN4-207ENST00000471246 GNA14O95837 355 aa0.72□□□□□ -2.29
UBXN4-207ENST00000471246 F10P00742 488 aa0.72□□□□□ -2.29
UBXN4-207ENST00000471246 P04436 131 aa0.72□□□□□ -2.29
UBXN4-207ENST00000471246 CENPBP07199 599 aaPredicted RBP0.72□□□□□ -2.29
UBXN4-207ENST00000471246 MRPL3P09001 348 aaKnown RBP0.72□□□□□ -2.29
UBXN4-207ENST00000471246 CHTF8P0CG12 524 aa0.72□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms