RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 FAAH2Q6GMR7 532 aa12.61□□□□□ -0.39
BRCA1-209ENST00000470026 SLC44A3Q8N4M1 653 aa12.61□□□□□ -0.39
BRCA1-209ENST00000470026 TMEM52Q8NDY8 209 aa12.61□□□□□ -0.39
BRCA1-209ENST00000470026 OR7G1Q8NGA0 311 aa12.61□□□□□ -0.39
BRCA1-209ENST00000470026 SMPDL3BQ92485 455 aa12.61□□□□□ -0.39
BRCA1-209ENST00000470026 HYLS1Q96M11 299 aa12.61□□□□□ -0.39
BRCA1-209ENST00000470026 LRFN5Q96NI6 719 aa12.61□□□□□ -0.39
BRCA1-209ENST00000470026 GABRG3Q99928 467 aa12.61□□□□□ -0.39
BRCA1-209ENST00000470026 ABCG5Q9H222 651 aa12.61□□□□□ -0.39
BRCA1-209ENST00000470026 MRPL39Q9NYK5 338 aaKnown RBP12.61□□□□□ -0.39
BRCA1-209ENST00000470026 MRPS2Q9Y399 296 aaKnown RBP12.61□□□□□ -0.39
BRCA1-209ENST00000470026 LOC105369274A0A096LPK9 316 aa12.61□□□□□ -0.39
BRCA1-209ENST00000470026 ANKRD61A6NGH8 418 aa12.61□□□□□ -0.39
BRCA1-209ENST00000470026 AGRPO00253 132 aa12.61□□□□□ -0.39
BRCA1-209ENST00000470026 ZNF3P17036 446 aa12.61□□□□□ -0.39
BRCA1-209ENST00000470026 OR12D2P58182 307 aa12.61□□□□□ -0.39
BRCA1-209ENST00000470026 POU6F2P78424 691 aaPredicted RBP12.61□□□□□ -0.39
BRCA1-209ENST00000470026 GPLD1P80108 840 aa12.61□□□□□ -0.39
BRCA1-209ENST00000470026 HTRA3P83110 453 aa12.61□□□□□ -0.39
BRCA1-209ENST00000470026 ID2Q02363 134 aa12.61□□□□□ -0.39
BRCA1-209ENST00000470026 GAS6Q14393 721 aa12.61□□□□□ -0.39
BRCA1-209ENST00000470026 ITPRIPL2Q3MIP1 535 aa12.61□□□□□ -0.39
BRCA1-209ENST00000470026 ACSM3Q53FZ2 586 aa12.61□□□□□ -0.39
BRCA1-209ENST00000470026 PRRT3Q5FWE3 981 aa12.61□□□□□ -0.39
BRCA1-209ENST00000470026 TMEM196Q5HYL7 178 aa12.61□□□□□ -0.39
BRCA1-209ENST00000470026 LINC00114Q6XXX2 140 aa12.61□□□□□ -0.39
BRCA1-209ENST00000470026 ZNF767PQ75MW2 155 aa12.61□□□□□ -0.39
BRCA1-209ENST00000470026 YAF2Q8IY57 180 aa12.61□□□□□ -0.39
BRCA1-209ENST00000470026 OR4N4Q8N0Y3 316 aa12.61□□□□□ -0.39
BRCA1-209ENST00000470026 OR4C6Q8NH72 309 aa12.61□□□□□ -0.39
BRCA1-209ENST00000470026 CCL4L1Q8NHW4 92 aa12.61□□□□□ -0.39
BRCA1-209ENST00000470026 TRMT10AQ8TBZ6 339 aaKnown RBP12.61□□□□□ -0.39
BRCA1-209ENST00000470026 HSD17B8Q92506 261 aa12.61□□□□□ -0.39
BRCA1-209ENST00000470026 OR51V1Q9H2C8 321 aa12.61□□□□□ -0.39
BRCA1-209ENST00000470026 GHITMQ9H3K2 345 aa12.61□□□□□ -0.39
BRCA1-209ENST00000470026 TMEM27Q9HBJ8 222 aa12.61□□□□□ -0.39
BRCA1-209ENST00000470026 MCCC2Q9HCC0 563 aa12.61□□□□□ -0.39
BRCA1-209ENST00000470026 ACTR10Q9NZ32 417 aa12.61□□□□□ -0.39
BRCA1-209ENST00000470026 FLRT3Q9NZU0 649 aa12.61□□□□□ -0.39
BRCA1-209ENST00000470026 ICAM5Q9UMF0 924 aa12.61□□□□□ -0.39
BRCA1-209ENST00000470026 TRAV27A0A087WT01 109 aa12.6□□□□□ -0.39
BRCA1-209ENST00000470026 TBC1D3DA0A087WVF3 549 aa12.6□□□□□ -0.39
BRCA1-209ENST00000470026 TBC1D3IA0A087WXS9 549 aa12.6□□□□□ -0.39
BRCA1-209ENST00000470026 A0A0A6YYJ9 748 aa12.6□□□□□ -0.39
BRCA1-209ENST00000470026 LRRC72A6NJI9 287 aa12.6□□□□□ -0.39
BRCA1-209ENST00000470026 TBC1D3LB9A6J9 549 aa12.6□□□□□ -0.39
BRCA1-209ENST00000470026 FZD7O75084 574 aa12.6□□□□□ -0.39
BRCA1-209ENST00000470026 LDB3O75112 727 aa12.6□□□□□ -0.39
BRCA1-209ENST00000470026 OR2B3O76000 313 aa12.6□□□□□ -0.39
BRCA1-209ENST00000470026 CT62P0C5K7 136 aa12.6□□□□□ -0.39
BRCA1-209ENST00000470026 TBC1D3HP0C7X1 549 aa12.6□□□□□ -0.39
BRCA1-209ENST00000470026 SAGP10523 405 aaPredicted RBP12.6□□□□□ -0.39
BRCA1-209ENST00000470026 CLUP10909 449 aa12.6□□□□□ -0.39
BRCA1-209ENST00000470026 SLC3A1Q07837 685 aa12.6□□□□□ -0.39
BRCA1-209ENST00000470026 GGTLC2Q14390 218 aa12.6□□□□□ -0.39
BRCA1-209ENST00000470026 BTBD16Q32M84 506 aa12.6□□□□□ -0.39
BRCA1-209ENST00000470026 SLC25A35Q3KQZ1 300 aa12.6□□□□□ -0.39
BRCA1-209ENST00000470026 MANEAQ5SRI9 462 aa12.6□□□□□ -0.39
BRCA1-209ENST00000470026 TBC1D3CQ6IPX1 549 aa12.6□□□□□ -0.39
BRCA1-209ENST00000470026 ENPP7Q6UWV6 458 aa12.6□□□□□ -0.39
BRCA1-209ENST00000470026 RTL4Q6ZR62 310 aa12.6□□□□□ -0.39
BRCA1-209ENST00000470026 SSX6Q7RTT6 188 aa12.6□□□□□ -0.39
BRCA1-209ENST00000470026 NANOGNBQ7Z5D8 188 aa12.6□□□□□ -0.39
BRCA1-209ENST00000470026 ZAR1Q86SH2 424 aa12.6□□□□□ -0.39
BRCA1-209ENST00000470026 TBC1D3Q8IZP1 549 aaPredicted RBP12.6□□□□□ -0.39
BRCA1-209ENST00000470026 SHISA5Q8N114 240 aa12.6□□□□□ -0.39
BRCA1-209ENST00000470026 SYS1Q8N2H4 156 aa12.6□□□□□ -0.39
BRCA1-209ENST00000470026 OR5J2Q8NH18 312 aa12.6□□□□□ -0.39
BRCA1-209ENST00000470026 TTC9Q92623 222 aa12.6□□□□□ -0.39
BRCA1-209ENST00000470026 PEX11GQ96HA9 241 aa12.6□□□□□ -0.39
BRCA1-209ENST00000470026 GFM1Q96RP9 751 aaKnown RBP12.6□□□□□ -0.39
BRCA1-209ENST00000470026 ZFYVE21Q9BQ24 234 aa12.6□□□□□ -0.39
BRCA1-209ENST00000470026 SLC6A17Q9H1V8 727 aa12.6□□□□□ -0.39
BRCA1-209ENST00000470026 FBRSQ9HAH7 460 aa12.6□□□□□ -0.39
BRCA1-209ENST00000470026 ABRACLQ9P1F3 81 aa12.6□□□□□ -0.39
BRCA1-209ENST00000470026 FBXL4Q9UKA2 621 aa12.6□□□□□ -0.39
BRCA1-209ENST00000470026 NCKAP1Q9Y2A7 1128 aa12.6□□□□□ -0.39
BRCA1-209ENST00000470026 A0A1B0GWA3 101 aa12.59□□□□□ -0.39
BRCA1-209ENST00000470026 GXYLT2A0PJZ3 443 aa12.59□□□□□ -0.39
BRCA1-209ENST00000470026 H0YGG7 62 aa12.59□□□□□ -0.39
BRCA1-209ENST00000470026 J3QLW9 94 aa12.59□□□□□ -0.39
BRCA1-209ENST00000470026 EEF1E1O43324 174 aaKnown RBP12.59□□□□□ -0.39
BRCA1-209ENST00000470026 UBL3O95164 117 aa12.59□□□□□ -0.39
BRCA1-209ENST00000470026 PPP1R3DO95685 299 aa12.59□□□□□ -0.39
BRCA1-209ENST00000470026 APBB3O95704 486 aa12.59□□□□□ -0.39
BRCA1-209ENST00000470026 MRPL3P09001 348 aaKnown RBP12.59□□□□□ -0.39
BRCA1-209ENST00000470026 ZNF19P17023 458 aa12.59□□□□□ -0.39
BRCA1-209ENST00000470026 RAB3BP20337 219 aa12.59□□□□□ -0.39
BRCA1-209ENST00000470026 NT5EP21589 574 aa12.59□□□□□ -0.39
BRCA1-209ENST00000470026 SLC6A6P31641 620 aa12.59□□□□□ -0.39
BRCA1-209ENST00000470026 ACAA2P42765 397 aaKnown RBP12.59□□□□□ -0.39
BRCA1-209ENST00000470026 MMP15P51511 669 aa12.59□□□□□ -0.39
BRCA1-209ENST00000470026 ARF3P61204 181 aaPredicted RBP12.59□□□□□ -0.39
BRCA1-209ENST00000470026 RPS7P62081 194 aaKnown RBP12.59□□□□□ -0.39
BRCA1-209ENST00000470026 DBPQ10586 325 aaPredicted RBP12.59□□□□□ -0.39
BRCA1-209ENST00000470026 CEP78Q5JTW2 689 aa12.59□□□□□ -0.39
BRCA1-209ENST00000470026 ARHGAP11AQ6P4F7 1023 aa12.59□□□□□ -0.39
BRCA1-209ENST00000470026 FIGNL1Q6PIW4 674 aa12.59□□□□□ -0.39
BRCA1-209ENST00000470026 ASB18Q6ZVZ8 466 aa12.59□□□□□ -0.39
BRCA1-209ENST00000470026 PRSS41Q7RTY9 318 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms