RNA–Protein interactions for RNA: ENST00000469550.6

HDAC3-205, Transcript of histone deacetylase 3, humanhuman

TSL 1 (best)

Gene HDAC3, Length 1,952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-205ENST00000469550 IL20Q9NYY1 176 aa8.9□□□□□ -0.99
HDAC3-205ENST00000469550 RABL2AQ9UBK7 228 aaPredicted RBP8.9□□□□□ -0.99
HDAC3-205ENST00000469550 RABL2BQ9UNT1 228 aa8.9□□□□□ -0.99
HDAC3-205ENST00000469550 ZFR2Q9UPR6 939 aaKnown RBP8.9□□□□□ -0.99
HDAC3-205ENST00000469550 ENTPD4Q9Y227 616 aa8.9□□□□□ -0.99
HDAC3-205ENST00000469550 NPFFR2Q9Y5X5 522 aa8.9□□□□□ -0.99
HDAC3-205ENST00000469550 ANKRD11Q6UB99 2663 aaPredicted RBP8.9□□□□□ -0.99
HDAC3-205ENST00000469550 A0A1W2PR77 199 aa8.89□□□□□ -0.99
HDAC3-205ENST00000469550 GSTZ1O43708 216 aaPredicted RBP8.89□□□□□ -0.99
HDAC3-205ENST00000469550 TPPPO94811 219 aa8.89□□□□□ -0.99
HDAC3-205ENST00000469550 ADH1BP00325 375 aa8.89□□□□□ -0.99
HDAC3-205ENST00000469550 IFNA16P05015 189 aa8.89□□□□□ -0.99
HDAC3-205ENST00000469550 HMGN1P05114 100 aa8.89□□□□□ -0.99
HDAC3-205ENST00000469550 H2AFB2P0C5Z0 115 aa8.89□□□□□ -0.99
HDAC3-205ENST00000469550 NR2F1P10589 423 aa8.89□□□□□ -0.99
HDAC3-205ENST00000469550 DRD2P14416 443 aa8.89□□□□□ -0.99
HDAC3-205ENST00000469550 ATF4P18848 351 aaPredicted RBP8.89□□□□□ -0.99
HDAC3-205ENST00000469550 C5AR1P21730 350 aa8.89□□□□□ -0.99
HDAC3-205ENST00000469550 ANXA11P50995 505 aaKnown RBP8.89□□□□□ -0.99
HDAC3-205ENST00000469550 CTSCP53634 463 aa8.89□□□□□ -0.99
HDAC3-205ENST00000469550 LSM11P83369 360 aaKnown RBP eCLIP8.89□□□□□ -0.99
HDAC3-205ENST00000469550 DYRK1AQ13627 763 aa8.89□□□□□ -0.99
HDAC3-205ENST00000469550 INSL4Q14641 139 aa8.89□□□□□ -0.99
HDAC3-205ENST00000469550 TRAM2Q15035 370 aa8.89□□□□□ -0.99
HDAC3-205ENST00000469550 ZNF791Q3KP31 576 aaPredicted RBP8.89□□□□□ -0.99
HDAC3-205ENST00000469550 CDC73Q6P1J9 531 aa8.89□□□□□ -0.99
HDAC3-205ENST00000469550 SFXN4Q6P4A7 337 aa8.89□□□□□ -0.99
HDAC3-205ENST00000469550 BHLHB9Q6PI77 547 aa8.89□□□□□ -0.99
HDAC3-205ENST00000469550 BAIAP2L2Q6UXY1 529 aa8.89□□□□□ -0.99
HDAC3-205ENST00000469550 GDPD4Q6W3E5 623 aa8.89□□□□□ -0.99
HDAC3-205ENST00000469550 KRT78Q8N1N4 520 aa8.89□□□□□ -0.99
HDAC3-205ENST00000469550 LILRA3Q8N6C8 439 aaPredicted RBP8.89□□□□□ -0.99
HDAC3-205ENST00000469550 SAMD12Q8N8I0 201 aa8.89□□□□□ -0.99
HDAC3-205ENST00000469550 TEX19Q8NA77 164 aa8.89□□□□□ -0.99
HDAC3-205ENST00000469550 OR2T4Q8NH00 348 aa8.89□□□□□ -0.99
HDAC3-205ENST00000469550 YIPF5Q969M3 257 aa8.89□□□□□ -0.99
HDAC3-205ENST00000469550 LCORQ96JN0 433 aaPredicted RBP8.89□□□□□ -0.99
HDAC3-205ENST00000469550 MTG2Q9H4K7 406 aa8.89□□□□□ -0.99
HDAC3-205ENST00000469550 ZDHHC6Q9H6R6 413 aa8.89□□□□□ -0.99
HDAC3-205ENST00000469550 KCMF1Q9P0J7 381 aa8.89□□□□□ -0.99
HDAC3-205ENST00000469550 SERGEFQ9UGK8 458 aa8.89□□□□□ -0.99
HDAC3-205ENST00000469550 BAHCC1Q9P281 2608 aa8.89□□□□□ -0.99
HDAC3-205ENST00000469550 A0A087WV48 116 aa8.88□□□□□ -0.99
HDAC3-205ENST00000469550 A0A0G2JPF8 293 aa8.88□□□□□ -0.99
HDAC3-205ENST00000469550 hCG_1807616A0A1W2PRN6 198 aa8.88□□□□□ -0.99
HDAC3-205ENST00000469550 HNRNPCL2B2RXH8 293 aa8.88□□□□□ -0.99
HDAC3-205ENST00000469550 HNRNPCL3B7ZW38 293 aa8.88□□□□□ -0.99
HDAC3-205ENST00000469550 M0R233 179 aa8.88□□□□□ -0.99
HDAC3-205ENST00000469550 PLPP1O14494 284 aa8.88□□□□□ -0.99
HDAC3-205ENST00000469550 CTDSPLO15194 276 aa8.88□□□□□ -0.99
HDAC3-205ENST00000469550 MID1O15344 667 aa8.88□□□□□ -0.99
HDAC3-205ENST00000469550 LATO43561 262 aa8.88□□□□□ -0.99
HDAC3-205ENST00000469550 PRAF2O60831 178 aa8.88□□□□□ -0.99
HDAC3-205ENST00000469550 FZD7O75084 574 aa8.88□□□□□ -0.99
HDAC3-205ENST00000469550 WNT1P04628 370 aa8.88□□□□□ -0.99
HDAC3-205ENST00000469550 SERPIND1P05546 499 aa8.88□□□□□ -0.99
HDAC3-205ENST00000469550 HNRNPCL4P0DMR1 293 aa8.88□□□□□ -0.99
HDAC3-205ENST00000469550 FPR3P25089 353 aa8.88□□□□□ -0.99
HDAC3-205ENST00000469550 GIFP27352 417 aa8.88□□□□□ -0.99
HDAC3-205ENST00000469550 PDHA2P29803 388 aa8.88□□□□□ -0.99
HDAC3-205ENST00000469550 CAPZA2P47755 286 aa8.88□□□□□ -0.99
HDAC3-205ENST00000469550 OMPP47874 163 aa8.88□□□□□ -0.99
HDAC3-205ENST00000469550 TMEM115Q12893 351 aaPredicted RBP8.88□□□□□ -0.99
HDAC3-205ENST00000469550 SHBQ15464 509 aa8.88□□□□□ -0.99
HDAC3-205ENST00000469550 NHLRC3Q5JS37 347 aa8.88□□□□□ -0.99
HDAC3-205ENST00000469550 KHDRBS2Q5VWX1 349 aaKnown RBP8.88□□□□□ -0.99
HDAC3-205ENST00000469550 LCTLQ6UWM7 567 aa8.88□□□□□ -0.99
HDAC3-205ENST00000469550 LYPD4Q6UWN0 246 aa8.88□□□□□ -0.99
HDAC3-205ENST00000469550 ARSKQ6UWY0 536 aa8.88□□□□□ -0.99
HDAC3-205ENST00000469550 Q6ZVL8 140 aa8.88□□□□□ -0.99
HDAC3-205ENST00000469550 KRT74Q7RTS7 529 aa8.88□□□□□ -0.99
HDAC3-205ENST00000469550 TECPR1Q7Z6L1 1165 aa8.88□□□□□ -0.99
HDAC3-205ENST00000469550 TMPRSS12Q86WS5 348 aa8.88□□□□□ -0.99
HDAC3-205ENST00000469550 FAM129CQ86XR2 697 aa8.88□□□□□ -0.99
HDAC3-205ENST00000469550 SIAH3Q8IW03 269 aa8.88□□□□□ -0.99
HDAC3-205ENST00000469550 PIAS4Q8N2W9 510 aaPredicted RBP8.88□□□□□ -0.99
HDAC3-205ENST00000469550 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.88□□□□□ -0.99
HDAC3-205ENST00000469550 OR4Q3Q8NH05 313 aa8.88□□□□□ -0.99
HDAC3-205ENST00000469550 SUN3Q8TAQ9 357 aa8.88□□□□□ -0.99
HDAC3-205ENST00000469550 HAVCR2Q8TDQ0 301 aa8.88□□□□□ -0.99
HDAC3-205ENST00000469550 GLYATL1Q969I3 302 aa8.88□□□□□ -0.99
HDAC3-205ENST00000469550 SLC35G5Q96KT7 338 aa8.88□□□□□ -0.99
HDAC3-205ENST00000469550 KLHL15Q96M94 604 aa8.88□□□□□ -0.99
HDAC3-205ENST00000469550 ELF4Q99607 663 aaPredicted RBP8.88□□□□□ -0.99
HDAC3-205ENST00000469550 RIOK2Q9BVS4 552 aaKnown RBP8.88□□□□□ -0.99
HDAC3-205ENST00000469550 FAIM2Q9BWQ8 316 aa8.88□□□□□ -0.99
HDAC3-205ENST00000469550 ZNF436Q9C0F3 470 aaPredicted RBP8.88□□□□□ -0.99
HDAC3-205ENST00000469550 SHARPINQ9H0F6 387 aa8.88□□□□□ -0.99
HDAC3-205ENST00000469550 OR51I1Q9H343 314 aa8.88□□□□□ -0.99
HDAC3-205ENST00000469550 INPP5EQ9NRR6 644 aa8.88□□□□□ -0.99
HDAC3-205ENST00000469550 RDH8Q9NYR8 311 aa8.88□□□□□ -0.99
HDAC3-205ENST00000469550 FAM8A1Q9UBU6 413 aa8.88□□□□□ -0.99
HDAC3-205ENST00000469550 POMT2Q9UKY4 750 aa8.88□□□□□ -0.99
HDAC3-205ENST00000469550 RASD1Q9Y272 281 aa8.88□□□□□ -0.99
HDAC3-205ENST00000469550 ATRXP46100 2492 aa8.88□□□□□ -0.99
HDAC3-205ENST00000469550 DMXL2Q8TDJ6 3036 aa8.88□□□□□ -0.99
HDAC3-205ENST00000469550 LOC105369274A0A096LPK9 316 aa8.88□□□□□ -0.99
HDAC3-205ENST00000469550 A0A0G2JK05 382 aa8.88□□□□□ -0.99
HDAC3-205ENST00000469550 A0A1W2PP55 124 aa8.88□□□□□ -0.99
HDAC3-205ENST00000469550 MFSD2BA6NFX1 497 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms