RNA–Protein interactions for RNA: ENST00000465282.5

USP39-211, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-211ENST00000465282 ARHGAP24Q8N264 748 aa15.3■□□□□ 0.04
USP39-211ENST00000465282 CLEC18CQ8NCF0 446 aa15.3■□□□□ 0.04
USP39-211ENST00000465282 FBXO27Q8NI29 283 aa15.3■□□□□ 0.04
USP39-211ENST00000465282 POC1BQ8TC44 478 aa15.3■□□□□ 0.04
USP39-211ENST00000465282 UCN2Q96RP3 112 aa15.3■□□□□ 0.04
USP39-211ENST00000465282 DIDO1Q9BTC0 2240 aaKnown RBP15.3■□□□□ 0.04
USP39-211ENST00000465282 C1orf21Q9H246 121 aa15.3■□□□□ 0.04
USP39-211ENST00000465282 SERINC1Q9NRX5 453 aa15.3■□□□□ 0.04
USP39-211ENST00000465282 PAQR5Q9NXK6 330 aaPredicted RBP15.3■□□□□ 0.04
USP39-211ENST00000465282 ADA2Q9NZK5 511 aa15.3■□□□□ 0.04
USP39-211ENST00000465282 TNFRSF10DQ9UBN6 386 aa15.3■□□□□ 0.04
USP39-211ENST00000465282 SETXQ7Z333 2677 aaKnown RBP15.29■□□□□ 0.04
USP39-211ENST00000465282 H3BML4 177 aa15.29■□□□□ 0.04
USP39-211ENST00000465282 ZNHIT1O43257 154 aa15.29■□□□□ 0.04
USP39-211ENST00000465282 EPPINO95925 133 aa15.29■□□□□ 0.04
USP39-211ENST00000465282 LGI1O95970 557 aa15.29■□□□□ 0.04
USP39-211ENST00000465282 TCEA1P23193 301 aaKnown RBP15.29■□□□□ 0.04
USP39-211ENST00000465282 KDELR2P33947 212 aa15.29■□□□□ 0.04
USP39-211ENST00000465282 SLC1A3P43003 542 aa15.29■□□□□ 0.04
USP39-211ENST00000465282 KCNJ5P48544 419 aa15.29■□□□□ 0.04
USP39-211ENST00000465282 IDH2P48735 452 aaKnown RBP15.29■□□□□ 0.04
USP39-211ENST00000465282 GSK3BP49841 420 aa15.29■□□□□ 0.04
USP39-211ENST00000465282 RPS3AP61247 264 aaKnown RBP15.29■□□□□ 0.04
USP39-211ENST00000465282 DMTNQ08495 405 aa15.29■□□□□ 0.04
USP39-211ENST00000465282 FOXF1Q12946 379 aa15.29■□□□□ 0.04
USP39-211ENST00000465282 SELENBP1Q13228 472 aa15.29■□□□□ 0.04
USP39-211ENST00000465282 DCST1Q5T197 706 aa15.29■□□□□ 0.04
USP39-211ENST00000465282 C1orf185Q5T7R7 199 aa15.29■□□□□ 0.04
USP39-211ENST00000465282 B3GNT6Q6ZMB0 384 aa15.29■□□□□ 0.04
USP39-211ENST00000465282 ESPNLQ6ZVH7 1005 aa15.29■□□□□ 0.04
USP39-211ENST00000465282 CHMP1BQ7LBR1 199 aa15.29■□□□□ 0.04
USP39-211ENST00000465282 FAM26EQ8N5C1 309 aa15.29■□□□□ 0.04
USP39-211ENST00000465282 OR5M1Q8NGP8 315 aa15.29■□□□□ 0.04
USP39-211ENST00000465282 DMRTA2Q96SC8 542 aa15.29■□□□□ 0.04
USP39-211ENST00000465282 KCTD14Q9BQ13 255 aaPredicted RBP15.29■□□□□ 0.04
USP39-211ENST00000465282 KLHDC3Q9BQ90 382 aa15.29■□□□□ 0.04
USP39-211ENST00000465282 CALHM2Q9HA72 323 aa15.29■□□□□ 0.04
USP39-211ENST00000465282 BAG5Q9UL15 447 aa15.29■□□□□ 0.04
USP39-211ENST00000465282 SPIN1Q9Y657 262 aaPredicted RBP15.29■□□□□ 0.04
USP39-211ENST00000465282 CD8B2A6NJW9 211 aa15.28■□□□□ 0.04
USP39-211ENST00000465282 H0Y3Z8 333 aa15.28■□□□□ 0.04
USP39-211ENST00000465282 ADAMDEC1O15204 470 aa15.28■□□□□ 0.04
USP39-211ENST00000465282 GSTA4O15217 222 aa15.28■□□□□ 0.04
USP39-211ENST00000465282 TPST1O60507 370 aa15.28■□□□□ 0.04
USP39-211ENST00000465282 ADAM11O75078 769 aa15.28■□□□□ 0.04
USP39-211ENST00000465282 T-ENOLP0DO92 83 aa15.28■□□□□ 0.04
USP39-211ENST00000465282 HSD17B1P14061 328 aa15.28■□□□□ 0.04
USP39-211ENST00000465282 HTR1EP28566 365 aa15.28■□□□□ 0.04
USP39-211ENST00000465282 CPOXP36551 454 aa15.28■□□□□ 0.04
USP39-211ENST00000465282 STARP49675 285 aa15.28■□□□□ 0.04
USP39-211ENST00000465282 CLK1P49759 484 aaKnown RBP15.28■□□□□ 0.04
USP39-211ENST00000465282 SLC25A3Q00325 362 aa15.28■□□□□ 0.04
USP39-211ENST00000465282 MERTKQ12866 999 aa15.28■□□□□ 0.04
USP39-211ENST00000465282 DUSP7Q16829 419 aa15.28■□□□□ 0.04
USP39-211ENST00000465282 PDSS1Q5T2R2 415 aa15.28■□□□□ 0.04
USP39-211ENST00000465282 WBP2NLQ6ICG8 309 aa15.28■□□□□ 0.04
USP39-211ENST00000465282 C3orf33Q6P1S2 294 aa15.28■□□□□ 0.04
USP39-211ENST00000465282 PLEKHM3Q6ZWE6 761 aa15.28■□□□□ 0.04
USP39-211ENST00000465282 FJX1Q86VR8 437 aa15.28■□□□□ 0.04
USP39-211ENST00000465282 LACC1Q8IV20 430 aa15.28■□□□□ 0.04
USP39-211ENST00000465282 LILRA2Q8N149 483 aa15.28■□□□□ 0.04
USP39-211ENST00000465282 LSMEM1Q8N8F7 131 aa15.28■□□□□ 0.04
USP39-211ENST00000465282 SLC25A43Q8WUT9 341 aaPredicted RBP15.28■□□□□ 0.04
USP39-211ENST00000465282 TAMM41Q96BW9 452 aa15.28■□□□□ 0.04
USP39-211ENST00000465282 ADAM19Q9H013 955 aa15.28■□□□□ 0.04
USP39-211ENST00000465282 ALKBH4Q9NXW9 302 aa15.28■□□□□ 0.04
USP39-211ENST00000465282 TESQ9UGI8 421 aaKnown RBP15.28■□□□□ 0.04
USP39-211ENST00000465282 NCOA6Q14686 2063 aaPredicted RBP15.28■□□□□ 0.04
USP39-211ENST00000465282 SHISA8B8ZZ34 492 aa15.27■□□□□ 0.04
USP39-211ENST00000465282 AP3D1O14617 1153 aa15.27■□□□□ 0.04
USP39-211ENST00000465282 GMNNO75496 209 aa15.27■□□□□ 0.04
USP39-211ENST00000465282 GKN3PP0CG01 181 aa15.27■□□□□ 0.04
USP39-211ENST00000465282 POLR2HP52434 150 aaKnown RBP15.27■□□□□ 0.04
USP39-211ENST00000465282 ACSF3Q4G176 576 aaPredicted RBP15.27■□□□□ 0.04
USP39-211ENST00000465282 NSUN5P2Q63ZY6 315 aa15.27■□□□□ 0.04
USP39-211ENST00000465282 RTL6Q6ICC9 239 aa15.27■□□□□ 0.04
USP39-211ENST00000465282 RPTNQ6XPR3 784 aa15.27■□□□□ 0.04
USP39-211ENST00000465282 ADGRE4PQ86SQ3 457 aa15.27■□□□□ 0.04
USP39-211ENST00000465282 GGNQ86UU5 652 aa15.27■□□□□ 0.04
USP39-211ENST00000465282 DEFB107AQ8IZN7 70 aa15.27■□□□□ 0.04
USP39-211ENST00000465282 SMYD1Q8NB12 490 aa15.27■□□□□ 0.04
USP39-211ENST00000465282 RBM15BQ8NDT2 890 aaKnown RBP15.27■□□□□ 0.04
USP39-211ENST00000465282 LZICQ8WZA0 190 aa15.27■□□□□ 0.04
USP39-211ENST00000465282 CDRT15Q96T59 188 aa15.27■□□□□ 0.04
USP39-211ENST00000465282 NPAS1Q99742 590 aa15.27■□□□□ 0.04
USP39-211ENST00000465282 ZNF559Q9BR84 538 aa15.27■□□□□ 0.04
USP39-211ENST00000465282 RSPO3Q9BXY4 272 aaPredicted RBP15.27■□□□□ 0.04
USP39-211ENST00000465282 TRIM2Q9C040 744 aa15.27■□□□□ 0.04
USP39-211ENST00000465282 TIGARQ9NQ88 270 aa15.27■□□□□ 0.04
USP39-211ENST00000465282 SH3BGRL2Q9UJC5 107 aa15.27■□□□□ 0.04
USP39-211ENST00000465282 ERRFI1Q9UJM3 462 aaPredicted RBP15.27■□□□□ 0.04
USP39-211ENST00000465282 USP22Q9UPT9 525 aa15.27■□□□□ 0.04
USP39-211ENST00000465282 SLC9A8Q9Y2E8 581 aa15.27■□□□□ 0.04
USP39-211ENST00000465282 PCNX1Q96RV3 2341 aa15.26■□□□□ 0.03
USP39-211ENST00000465282 WIPF3A6NGB9 483 aa15.26■□□□□ 0.03
USP39-211ENST00000465282 CXCR6O00574 342 aa15.26■□□□□ 0.03
USP39-211ENST00000465282 FMO6PO60774 539 aa15.26■□□□□ 0.03
USP39-211ENST00000465282 AGFG2O95081 481 aa15.26■□□□□ 0.03
USP39-211ENST00000465282 FESP07332 822 aa15.26■□□□□ 0.03
USP39-211ENST00000465282 AGAP20933 346 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms