RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 REXO5Q96IC2 774 aaKnown RBP15.35■□□□□ 0.05
VPS52-215ENST00000464425 TMEM185BQ9H7F4 350 aa15.35■□□□□ 0.05
VPS52-215ENST00000464425 SPAG4Q9NPE6 437 aa15.35■□□□□ 0.05
VPS52-215ENST00000464425 TMEM181Q9P2C4 612 aa15.35■□□□□ 0.05
VPS52-215ENST00000464425 ABCD2Q9UBJ2 740 aa15.35■□□□□ 0.05
VPS52-215ENST00000464425 C7orf72A4D263 438 aa15.34■□□□□ 0.05
VPS52-215ENST00000464425 MBD3L4A6NDZ8 208 aaPredicted RBP15.34■□□□□ 0.05
VPS52-215ENST00000464425 MBD3L3A6NE82 208 aaPredicted RBP15.34■□□□□ 0.05
VPS52-215ENST00000464425 AGAP5A6NIR3 686 aa15.34■□□□□ 0.05
VPS52-215ENST00000464425 MBD3L5A6NJ08 208 aaPredicted RBP15.34■□□□□ 0.05
VPS52-215ENST00000464425 C5orf58C9J3I9 102 aa15.34■□□□□ 0.05
VPS52-215ENST00000464425 DNAJA2O60884 412 aa15.34■□□□□ 0.05
VPS52-215ENST00000464425 PGM3O95394 542 aa15.34■□□□□ 0.05
VPS52-215ENST00000464425 ETS2P15036 469 aa15.34■□□□□ 0.05
VPS52-215ENST00000464425 IL11P20809 199 aa15.34■□□□□ 0.05
VPS52-215ENST00000464425 BMP5P22003 454 aa15.34■□□□□ 0.05
VPS52-215ENST00000464425 PSMA4P25789 261 aaKnown RBP15.34■□□□□ 0.05
VPS52-215ENST00000464425 CPOXP36551 454 aa15.34■□□□□ 0.05
VPS52-215ENST00000464425 PGM1P36871 562 aa15.34■□□□□ 0.05
VPS52-215ENST00000464425 SLC7A2P52569 658 aa15.34■□□□□ 0.05
VPS52-215ENST00000464425 EEFSECP57772 596 aaKnown RBP15.34■□□□□ 0.05
VPS52-215ENST00000464425 KCNJ10P78508 379 aa15.34■□□□□ 0.05
VPS52-215ENST00000464425 MXRA7P84157 204 aa15.34■□□□□ 0.05
VPS52-215ENST00000464425 FOXF1Q12946 379 aa15.34■□□□□ 0.05
VPS52-215ENST00000464425 CBFBQ13951 182 aa15.34■□□□□ 0.05
VPS52-215ENST00000464425 SCARB2Q14108 478 aa15.34■□□□□ 0.05
VPS52-215ENST00000464425 ERICH5Q6P6B1 374 aa15.34■□□□□ 0.05
VPS52-215ENST00000464425 ADGRE4PQ86SQ3 457 aa15.34■□□□□ 0.05
VPS52-215ENST00000464425 GRAMD2AQ8IUY3 354 aa15.34■□□□□ 0.05
VPS52-215ENST00000464425 ZZZ3Q8IYH5 903 aa15.34■□□□□ 0.05
VPS52-215ENST00000464425 HIPK4Q8NE63 616 aa15.34■□□□□ 0.05
VPS52-215ENST00000464425 TOR1AIP2Q8NFQ8 470 aa15.34■□□□□ 0.05
VPS52-215ENST00000464425 MBD3L2Q8NHZ7 208 aaPredicted RBP15.34■□□□□ 0.05
VPS52-215ENST00000464425 FBXO27Q8NI29 283 aa15.34■□□□□ 0.05
VPS52-215ENST00000464425 BBS10Q8TAM1 723 aa15.34■□□□□ 0.05
VPS52-215ENST00000464425 WNT2BQ93097 391 aa15.34■□□□□ 0.05
VPS52-215ENST00000464425 ST6GALNAC1Q9NSC7 600 aaPredicted RBP15.34■□□□□ 0.05
VPS52-215ENST00000464425 CLCF1Q9UBD9 225 aa15.34■□□□□ 0.05
VPS52-215ENST00000464425 STOML1Q9UBI4 398 aa15.34■□□□□ 0.05
VPS52-215ENST00000464425 ARHGAP21Q5T5U3 1957 aa15.34■□□□□ 0.05
VPS52-215ENST00000464425 FAM220BPB1ANY3 271 aa15.33■□□□□ 0.04
VPS52-215ENST00000464425 NME4O00746 187 aa15.33■□□□□ 0.04
VPS52-215ENST00000464425 EIF1AYO14602 144 aaKnown RBP15.33■□□□□ 0.04
VPS52-215ENST00000464425 TGM6O95932 706 aa15.33■□□□□ 0.04
VPS52-215ENST00000464425 PRKCAP17252 672 aa15.33■□□□□ 0.04
VPS52-215ENST00000464425 RPS4Y1P22090 263 aaKnown RBP15.33■□□□□ 0.04
VPS52-215ENST00000464425 RYKP34925 604 aa15.33■□□□□ 0.04
VPS52-215ENST00000464425 EIF1P41567 113 aaKnown RBP15.33■□□□□ 0.04
VPS52-215ENST00000464425 ZNF136P52737 540 aa15.33■□□□□ 0.04
VPS52-215ENST00000464425 SLC25A3Q00325 362 aa15.33■□□□□ 0.04
VPS52-215ENST00000464425 BNIP1Q12981 228 aa15.33■□□□□ 0.04
VPS52-215ENST00000464425 VEZF1Q14119 521 aa15.33■□□□□ 0.04
VPS52-215ENST00000464425 QPRTQ15274 297 aa15.33■□□□□ 0.04
VPS52-215ENST00000464425 VMACQ2NL98 169 aa15.33■□□□□ 0.04
VPS52-215ENST00000464425 SPATS1Q496A3 300 aa15.33■□□□□ 0.04
VPS52-215ENST00000464425 RPS26P11Q5JNZ5 115 aaPredicted RBP15.33■□□□□ 0.04
VPS52-215ENST00000464425 P4HA3Q7Z4N8 544 aa15.33■□□□□ 0.04
VPS52-215ENST00000464425 GGNQ86UU5 652 aa15.33■□□□□ 0.04
VPS52-215ENST00000464425 RBM15BQ8NDT2 890 aaKnown RBP15.33■□□□□ 0.04
VPS52-215ENST00000464425 NFKBIDQ8NI38 313 aa15.33■□□□□ 0.04
VPS52-215ENST00000464425 INTS12Q96CB8 462 aaKnown RBP15.33■□□□□ 0.04
VPS52-215ENST00000464425 ZNF845Q96IR2 970 aaPredicted RBP15.33■□□□□ 0.04
VPS52-215ENST00000464425 UCN2Q96RP3 112 aa15.33■□□□□ 0.04
VPS52-215ENST00000464425 TM9SF2Q99805 663 aa15.33■□□□□ 0.04
VPS52-215ENST00000464425 PINK1Q9BXM7 581 aa15.33■□□□□ 0.04
VPS52-215ENST00000464425 ANGPT4Q9Y264 503 aa15.33■□□□□ 0.04
VPS52-215ENST00000464425 SLC35A3Q9Y2D2 325 aa15.33■□□□□ 0.04
VPS52-215ENST00000464425 NBPF19A0A087WUL8 3843 aa15.33■□□□□ 0.04
VPS52-215ENST00000464425 SLC22A20A6NK97 555 aa15.32■□□□□ 0.04
VPS52-215ENST00000464425 EFNA2O43921 213 aa15.32■□□□□ 0.04
VPS52-215ENST00000464425 ATP5HO75947 161 aa15.32■□□□□ 0.04
VPS52-215ENST00000464425 DBIP07108 87 aaKnown RBP15.32■□□□□ 0.04
VPS52-215ENST00000464425 TMIGD3P0DMS9 266 aaPredicted RBP15.32■□□□□ 0.04
VPS52-215ENST00000464425 IL7RP16871 459 aa15.32■□□□□ 0.04
VPS52-215ENST00000464425 ME2P23368 584 aa15.32■□□□□ 0.04
VPS52-215ENST00000464425 CTSSP25774 331 aa15.32■□□□□ 0.04
VPS52-215ENST00000464425 PCGF2P35227 344 aa15.32■□□□□ 0.04
VPS52-215ENST00000464425 EIF1AXP47813 144 aaKnown RBP15.32■□□□□ 0.04
VPS52-215ENST00000464425 PCBP3P57721 371 aaKnown RBP15.32■□□□□ 0.04
VPS52-215ENST00000464425 RPS3AP61247 264 aaKnown RBP15.32■□□□□ 0.04
VPS52-215ENST00000464425 RAC1P63000 192 aa15.32■□□□□ 0.04
VPS52-215ENST00000464425 LIPEQ05469 1076 aa15.32■□□□□ 0.04
VPS52-215ENST00000464425 TFF3Q07654 80 aa15.32■□□□□ 0.04
VPS52-215ENST00000464425 FOXF2Q12947 444 aa15.32■□□□□ 0.04
VPS52-215ENST00000464425 SGCBQ16585 318 aa15.32■□□□□ 0.04
VPS52-215ENST00000464425 PPP4R4Q6NUP7 873 aa15.32■□□□□ 0.04
VPS52-215ENST00000464425 KRT73Q86Y46 540 aa15.32■□□□□ 0.04
VPS52-215ENST00000464425 CMIPQ8IY22 773 aa15.32■□□□□ 0.04
VPS52-215ENST00000464425 PEX5LQ8IYB4 626 aa15.32■□□□□ 0.04
VPS52-215ENST00000464425 DEFB107AQ8IZN7 70 aa15.32■□□□□ 0.04
VPS52-215ENST00000464425 GCNT2Q8N0V5 402 aa15.32■□□□□ 0.04
VPS52-215ENST00000464425 LILRA2Q8N149 483 aa15.32■□□□□ 0.04
VPS52-215ENST00000464425 FAM71CQ8NEG0 241 aa15.32■□□□□ 0.04
VPS52-215ENST00000464425 ATP6V1C2Q8NEY4 427 aa15.32■□□□□ 0.04
VPS52-215ENST00000464425 OR2T12Q8NG77 320 aa15.32■□□□□ 0.04
VPS52-215ENST00000464425 FIG4Q92562 907 aa15.32■□□□□ 0.04
VPS52-215ENST00000464425 CNOT9Q92600 299 aaKnown RBP15.32■□□□□ 0.04
VPS52-215ENST00000464425 ALG2Q9H553 416 aa15.32■□□□□ 0.04
VPS52-215ENST00000464425 PIF1Q9H611 641 aa15.32■□□□□ 0.04
VPS52-215ENST00000464425 TAS2R1Q9NYW7 299 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms