RNA–Protein interactions for RNA: ENST00000462475.1

COL7A1-204, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 3

Gene COL7A1, Length 305 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-204ENST00000462475 BHLHE41Q9C0J9 482 aaPredicted RBP14.26□□□□□ -0.13
COL7A1-204ENST00000462475 ZDHHC2Q9UIJ5 367 aa14.26□□□□□ -0.13
COL7A1-204ENST00000462475 KCNE5Q9UJ90 142 aa14.26□□□□□ -0.13
COL7A1-204ENST00000462475 LIPT1Q9Y234 373 aa14.26□□□□□ -0.13
COL7A1-204ENST00000462475 FREM1Q5H8C1 2179 aa14.26□□□□□ -0.13
COL7A1-204ENST00000462475 A0A1W2PP18 115 aa14.25□□□□□ -0.13
COL7A1-204ENST00000462475 CYTIPO60759 359 aa14.25□□□□□ -0.13
COL7A1-204ENST00000462475 NDUFS7O75251 213 aa14.25□□□□□ -0.13
COL7A1-204ENST00000462475 IGHV4-39P01824 125 aa14.25□□□□□ -0.13
COL7A1-204ENST00000462475 G6PDP11413 515 aa14.25□□□□□ -0.13
COL7A1-204ENST00000462475 PRPS1L1P21108 318 aa14.25□□□□□ -0.13
COL7A1-204ENST00000462475 ACVR1BP36896 505 aa14.25□□□□□ -0.13
COL7A1-204ENST00000462475 RASGEF1BQ0VAM2 473 aa14.25□□□□□ -0.13
COL7A1-204ENST00000462475 STK11Q15831 433 aa14.25□□□□□ -0.13
COL7A1-204ENST00000462475 ETFDHQ16134 617 aa14.25□□□□□ -0.13
COL7A1-204ENST00000462475 TIGD2Q4W5G0 525 aa14.25□□□□□ -0.13
COL7A1-204ENST00000462475 C3orf33Q6P1S2 294 aa14.25□□□□□ -0.13
COL7A1-204ENST00000462475 HOMEZQ8IX15 550 aa14.25□□□□□ -0.13
COL7A1-204ENST00000462475 CLEC4FQ8N1N0 589 aa14.25□□□□□ -0.13
COL7A1-204ENST00000462475 NATD1Q8N6N6 113 aa14.25□□□□□ -0.13
COL7A1-204ENST00000462475 TCP10LQ8TDR4 215 aa14.25□□□□□ -0.13
COL7A1-204ENST00000462475 THUMPD3Q9BV44 507 aaKnown RBP14.25□□□□□ -0.13
COL7A1-204ENST00000462475 DUSP26Q9BV47 211 aa14.25□□□□□ -0.13
COL7A1-204ENST00000462475 REG4Q9BYZ8 158 aa14.25□□□□□ -0.13
COL7A1-204ENST00000462475 NMUR2Q9GZQ4 415 aa14.25□□□□□ -0.13
COL7A1-204ENST00000462475 SLCO5A1Q9H2Y9 848 aa14.25□□□□□ -0.13
COL7A1-204ENST00000462475 NPAP1Q9NZP6 1156 aa14.25□□□□□ -0.13
COL7A1-204ENST00000462475 FCMRO60667 390 aa14.24□□□□□ -0.13
COL7A1-204ENST00000462475 RAMP1O60894 148 aa14.24□□□□□ -0.13
COL7A1-204ENST00000462475 CYP7B1O75881 506 aa14.24□□□□□ -0.13
COL7A1-204ENST00000462475 FESP07332 822 aa14.24□□□□□ -0.13
COL7A1-204ENST00000462475 THBS1P07996 1170 aa14.24□□□□□ -0.13
COL7A1-204ENST00000462475 COX5AP20674 150 aa14.24□□□□□ -0.13
COL7A1-204ENST00000462475 IGHV1-2P23083 117 aa14.24□□□□□ -0.13
COL7A1-204ENST00000462475 IDUAP35475 653 aa14.24□□□□□ -0.13
COL7A1-204ENST00000462475 PPA1Q15181 289 aa14.24□□□□□ -0.13
COL7A1-204ENST00000462475 GPR68Q15743 365 aa14.24□□□□□ -0.13
COL7A1-204ENST00000462475 HEPHL1Q6MZM0 1159 aa14.24□□□□□ -0.13
COL7A1-204ENST00000462475 DNAJC14Q6Y2X3 702 aaPredicted RBP14.24□□□□□ -0.13
COL7A1-204ENST00000462475 CXXC5Q7LFL8 322 aaKnown RBP14.24□□□□□ -0.13
COL7A1-204ENST00000462475 CLECL1Q8IZS7 167 aa14.24□□□□□ -0.13
COL7A1-204ENST00000462475 ZNF75CPQ92670 426 aaPredicted RBP14.24□□□□□ -0.13
COL7A1-204ENST00000462475 TUBGCP3Q96CW5 907 aa14.24□□□□□ -0.13
COL7A1-204ENST00000462475 PRPF18Q99633 342 aaKnown RBP14.24□□□□□ -0.13
COL7A1-204ENST00000462475 USB1Q9BQ65 265 aaKnown RBP14.24□□□□□ -0.13
COL7A1-204ENST00000462475 LAT2Q9GZY6 243 aa14.24□□□□□ -0.13
COL7A1-204ENST00000462475 CADP27708 2225 aa14.23□□□□□ -0.13
COL7A1-204ENST00000462475 STAB1Q9NY15 2570 aa14.23□□□□□ -0.13
COL7A1-204ENST00000462475 RNF103-CHMP3A0A140T963 221 aa14.23□□□□□ -0.13
COL7A1-204ENST00000462475 SHISA9B4DS77 424 aa14.23□□□□□ -0.13
COL7A1-204ENST00000462475 DNAJA2O60884 412 aa14.23□□□□□ -0.13
COL7A1-204ENST00000462475 UGT2B17O75795 530 aa14.23□□□□□ -0.13
COL7A1-204ENST00000462475 CSTAP01040 98 aa14.23□□□□□ -0.13
COL7A1-204ENST00000462475 CD8AP01732 235 aa14.23□□□□□ -0.13
COL7A1-204ENST00000462475 UBTFL6P0CB48 400 aaPredicted RBP14.23□□□□□ -0.13
COL7A1-204ENST00000462475 MATN1P21941 496 aa14.23□□□□□ -0.13
COL7A1-204ENST00000462475 SERPINB5P36952 375 aa14.23□□□□□ -0.13
COL7A1-204ENST00000462475 DIO1P49895 249 aa14.23□□□□□ -0.13
COL7A1-204ENST00000462475 CDH11P55287 796 aa14.23□□□□□ -0.13
COL7A1-204ENST00000462475 SESN3P58005 492 aa14.23□□□□□ -0.13
COL7A1-204ENST00000462475 C21orf58P58505 322 aa14.23□□□□□ -0.13
COL7A1-204ENST00000462475 ZNF141Q15928 474 aa14.23□□□□□ -0.13
COL7A1-204ENST00000462475 PGS1Q32NB8 556 aa14.23□□□□□ -0.13
COL7A1-204ENST00000462475 ABLIM2Q6H8Q1 611 aa14.23□□□□□ -0.13
COL7A1-204ENST00000462475 BHLHB9Q6PI77 547 aa14.23□□□□□ -0.13
COL7A1-204ENST00000462475 C6orf120Q7Z4R8 191 aa14.23□□□□□ -0.13
COL7A1-204ENST00000462475 RIBC1Q8N443 379 aaPredicted RBP14.23□□□□□ -0.13
COL7A1-204ENST00000462475 ST8SIA1Q92185 356 aa14.23□□□□□ -0.13
COL7A1-204ENST00000462475 SLC35G5Q96KT7 338 aa14.23□□□□□ -0.13
COL7A1-204ENST00000462475 TRAF4Q9BUZ4 470 aaPredicted RBP14.23□□□□□ -0.13
COL7A1-204ENST00000462475 ZNF350Q9GZX5 532 aa14.23□□□□□ -0.13
COL7A1-204ENST00000462475 L2HGDHQ9H9P8 463 aa14.23□□□□□ -0.13
COL7A1-204ENST00000462475 GDF2Q9UK05 429 aaPredicted RBP14.23□□□□□ -0.13
COL7A1-204ENST00000462475 MKLN1Q9UL63 735 aa14.23□□□□□ -0.13
COL7A1-204ENST00000462475 ZNF724A8MTY0 619 aa14.22□□□□□ -0.13
COL7A1-204ENST00000462475 ADAM11O75078 769 aa14.22□□□□□ -0.13
COL7A1-204ENST00000462475 BCAS1O75363 584 aaPredicted RBP14.22□□□□□ -0.13
COL7A1-204ENST00000462475 STX11O75558 287 aa14.22□□□□□ -0.13
COL7A1-204ENST00000462475 AK1P00568 194 aa14.22□□□□□ -0.13
COL7A1-204ENST00000462475 CREB1P16220 341 aa14.22□□□□□ -0.13
COL7A1-204ENST00000462475 GGT1P19440 569 aa14.22□□□□□ -0.13
COL7A1-204ENST00000462475 PTNP21246 168 aa14.22□□□□□ -0.13
COL7A1-204ENST00000462475 CASP9P55211 416 aa14.22□□□□□ -0.13
COL7A1-204ENST00000462475 MERTKQ12866 999 aa14.22□□□□□ -0.13
COL7A1-204ENST00000462475 MAPK14Q16539 360 aa14.22□□□□□ -0.13
COL7A1-204ENST00000462475 SYT14P1Q58G82 188 aa14.22□□□□□ -0.13
COL7A1-204ENST00000462475 OR4F3Q6IEY1 312 aa14.22□□□□□ -0.13
COL7A1-204ENST00000462475 DNM1P46Q6ZS02 220 aa14.22□□□□□ -0.13
COL7A1-204ENST00000462475 TMPPEQ6ZT21 453 aa14.22□□□□□ -0.13
COL7A1-204ENST00000462475 GALNT5Q7Z7M9 940 aa14.22□□□□□ -0.13
COL7A1-204ENST00000462475 DTX2Q86UW9 622 aa14.22□□□□□ -0.13
COL7A1-204ENST00000462475 LSRQ86X29 649 aaPredicted RBP14.22□□□□□ -0.13
COL7A1-204ENST00000462475 ARL8AQ96BM9 186 aa14.22□□□□□ -0.13
COL7A1-204ENST00000462475 ACER3Q9NUN7 267 aa14.22□□□□□ -0.13
COL7A1-204ENST00000462475 CISD1Q9NZ45 108 aaKnown RBP14.22□□□□□ -0.13
COL7A1-204ENST00000462475 LGALS13Q9UHV8 139 aa14.22□□□□□ -0.13
COL7A1-204ENST00000462475 MXRA5Q9NR99 2828 aa14.22□□□□□ -0.13
COL7A1-204ENST00000462475 SULT2B1O00204 365 aa14.21□□□□□ -0.13
COL7A1-204ENST00000462475 ABCD4O14678 606 aa14.21□□□□□ -0.13
COL7A1-204ENST00000462475 IGHV3-9P01782 118 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms