RNA–Protein interactions for RNA: ENST00000461377.5

CCM2-203, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,983 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-203ENST00000461377 NUDT22Q9BRQ3 303 aa18.59■□□□□ 0.57
CCM2-203ENST00000461377 NXF5Q9H1B4 397 aaKnown RBP18.59■□□□□ 0.57
CCM2-203ENST00000461377 ZNF768Q9H5H4 540 aaKnown RBP18.59■□□□□ 0.57
CCM2-203ENST00000461377 MED20Q9H944 212 aa18.59■□□□□ 0.57
CCM2-203ENST00000461377 MCCC2Q9HCC0 563 aa18.59■□□□□ 0.57
CCM2-203ENST00000461377 ERVK13-1Q9NX77 482 aa18.59■□□□□ 0.57
CCM2-203ENST00000461377 ETAA1Q9NY74 926 aa18.59■□□□□ 0.57
CCM2-203ENST00000461377 TNFRSF10DQ9UBN6 386 aa18.59■□□□□ 0.57
CCM2-203ENST00000461377 SERTAD3Q9UJW9 196 aa18.59■□□□□ 0.57
CCM2-203ENST00000461377 ICAM5Q9UMF0 924 aa18.59■□□□□ 0.57
CCM2-203ENST00000461377 SF3B6Q9Y3B4 125 aaKnown RBP18.59■□□□□ 0.57
CCM2-203ENST00000461377 A0A075B6Q4 140 aa18.58■□□□□ 0.56
CCM2-203ENST00000461377 FRG2CA6NGY1 282 aa18.58■□□□□ 0.56
CCM2-203ENST00000461377 C19orf67A6NJJ6 358 aa18.58■□□□□ 0.56
CCM2-203ENST00000461377 PFDN1O60925 122 aa18.58■□□□□ 0.56
CCM2-203ENST00000461377 S100A5P33763 92 aa18.58■□□□□ 0.56
CCM2-203ENST00000461377 RPS19P39019 145 aaKnown RBP18.58■□□□□ 0.56
CCM2-203ENST00000461377 PLK5Q496M5 336 aa18.58■□□□□ 0.56
CCM2-203ENST00000461377 ARMC4Q5T2S8 1044 aa18.58■□□□□ 0.56
CCM2-203ENST00000461377 PRPF38BQ5VTL8 546 aaKnown RBP18.58■□□□□ 0.56
CCM2-203ENST00000461377 SNX29P2Q8IUI4 249 aa18.58■□□□□ 0.56
CCM2-203ENST00000461377 KLHL36Q8N4N3 616 aa18.58■□□□□ 0.56
CCM2-203ENST00000461377 SIRT6Q8N6T7 355 aa18.58■□□□□ 0.56
CCM2-203ENST00000461377 C7orf57Q8NEG2 295 aa18.58■□□□□ 0.56
CCM2-203ENST00000461377 OR52N1Q8NH53 320 aa18.58■□□□□ 0.56
CCM2-203ENST00000461377 DNAJA4Q8WW22 397 aaPredicted RBP18.58■□□□□ 0.56
CCM2-203ENST00000461377 OTULINQ96BN8 352 aa18.58■□□□□ 0.56
CCM2-203ENST00000461377 HCAR1Q9BXC0 346 aa18.58■□□□□ 0.56
CCM2-203ENST00000461377 OR8D2Q9GZM6 311 aa18.58■□□□□ 0.56
CCM2-203ENST00000461377 UBQLN4Q9NRR5 601 aa18.58■□□□□ 0.56
CCM2-203ENST00000461377 TXNL4BQ9NX01 149 aaKnown RBP18.58■□□□□ 0.56
CCM2-203ENST00000461377 CLCA3PQ9Y6N3 262 aa18.58■□□□□ 0.56
CCM2-203ENST00000461377 A0A087WUJ7 227 aa18.57■□□□□ 0.56
CCM2-203ENST00000461377 A0A1B0GX78 115 aa18.57■□□□□ 0.56
CCM2-203ENST00000461377 SYNDIG1LA6NDD5 238 aa18.57■□□□□ 0.56
CCM2-203ENST00000461377 OCM2P0CE71 109 aa18.57■□□□□ 0.56
CCM2-203ENST00000461377 OCMP0CE72 109 aaPredicted RBP18.57■□□□□ 0.56
CCM2-203ENST00000461377 HOXA6P31267 233 aa18.57■□□□□ 0.56
CCM2-203ENST00000461377 RPS25P62851 125 aaKnown RBP18.57■□□□□ 0.56
CCM2-203ENST00000461377 ACSM1Q08AH1 577 aa18.57■□□□□ 0.56
CCM2-203ENST00000461377 ZNF362Q5T0B9 420 aaPredicted RBP18.57■□□□□ 0.56
CCM2-203ENST00000461377 MAMSTRQ6ZN01 415 aa18.57■□□□□ 0.56
CCM2-203ENST00000461377 RTL4Q6ZR62 310 aa18.57■□□□□ 0.56
CCM2-203ENST00000461377 SLITRK4Q8IW52 837 aa18.57■□□□□ 0.56
CCM2-203ENST00000461377 KISS1RQ969F8 398 aaPredicted RBP18.57■□□□□ 0.56
CCM2-203ENST00000461377 SECISBP2Q96T21 854 aaKnown RBP18.57■□□□□ 0.56
CCM2-203ENST00000461377 MROQ9BYG7 248 aa18.57■□□□□ 0.56
CCM2-203ENST00000461377 MKKSQ9NPJ1 570 aaPredicted RBP18.57■□□□□ 0.56
CCM2-203ENST00000461377 PRDM6Q9NQX0 595 aa18.57■□□□□ 0.56
CCM2-203ENST00000461377 CCDC163A0A0D9SF12 145 aa18.57■□□□□ 0.56
CCM2-203ENST00000461377 PPP1R3DO95685 299 aa18.57■□□□□ 0.56
CCM2-203ENST00000461377 EPHA8P29322 1005 aaPredicted RBP18.57■□□□□ 0.56
CCM2-203ENST00000461377 SLC6A6P31641 620 aa18.57■□□□□ 0.56
CCM2-203ENST00000461377 ATP6V1E1P36543 226 aa18.57■□□□□ 0.56
CCM2-203ENST00000461377 DHPSP49366 369 aaPredicted RBP18.57■□□□□ 0.56
CCM2-203ENST00000461377 ARHGAP40Q5TG30 622 aa18.57■□□□□ 0.56
CCM2-203ENST00000461377 KANSL1Q7Z3B3 1105 aa18.57■□□□□ 0.56
CCM2-203ENST00000461377 GATAD2AQ86YP4 633 aa18.57■□□□□ 0.56
CCM2-203ENST00000461377 ZNF527Q8NB42 609 aa18.57■□□□□ 0.56
CCM2-203ENST00000461377 PTP4A1Q93096 173 aa18.57■□□□□ 0.56
CCM2-203ENST00000461377 ADIPOR1Q96A54 375 aa18.57■□□□□ 0.56
CCM2-203ENST00000461377 C3orf49Q96BT1 292 aa18.57■□□□□ 0.56
CCM2-203ENST00000461377 LCORQ96JN0 433 aaPredicted RBP18.57■□□□□ 0.56
CCM2-203ENST00000461377 DPYSL5Q9BPU6 564 aa18.57■□□□□ 0.56
CCM2-203ENST00000461377 NUAK2Q9H093 628 aa18.57■□□□□ 0.56
CCM2-203ENST00000461377 FGF21Q9NSA1 209 aa18.57■□□□□ 0.56
CCM2-203ENST00000461377 ANKRD33BA6NCL7 494 aa18.56■□□□□ 0.56
CCM2-203ENST00000461377 CCDC182A6NF36 153 aa18.56■□□□□ 0.56
CCM2-203ENST00000461377 RIIAD1A6NNX1 92 aa18.56■□□□□ 0.56
CCM2-203ENST00000461377 PRR23D1E9PI22 279 aaPredicted RBP18.56■□□□□ 0.56
CCM2-203ENST00000461377 CBFA2T3O75081 653 aa18.56■□□□□ 0.56
CCM2-203ENST00000461377 LALBAP00709 142 aa18.56■□□□□ 0.56
CCM2-203ENST00000461377 PRR23D2P0DMB1 279 aaPredicted RBP18.56■□□□□ 0.56
CCM2-203ENST00000461377 PAICSP22234 425 aaKnown RBP18.56■□□□□ 0.56
CCM2-203ENST00000461377 COPZ1P61923 177 aa18.56■□□□□ 0.56
CCM2-203ENST00000461377 OXA1LQ15070 435 aa18.56■□□□□ 0.56
CCM2-203ENST00000461377 CD226Q15762 336 aa18.56■□□□□ 0.56
CCM2-203ENST00000461377 VWA2Q5GFL6 755 aa18.56■□□□□ 0.56
CCM2-203ENST00000461377 PERM1Q5SV97 790 aa18.56■□□□□ 0.56
CCM2-203ENST00000461377 SLC37A3Q8NCC5 494 aa18.56■□□□□ 0.56
CCM2-203ENST00000461377 OR51G2Q8NGK0 314 aa18.56■□□□□ 0.56
CCM2-203ENST00000461377 OR4C6Q8NH72 309 aa18.56■□□□□ 0.56
CCM2-203ENST00000461377 NACC2Q96BF6 587 aa18.56■□□□□ 0.56
CCM2-203ENST00000461377 SGTBQ96EQ0 304 aa18.56■□□□□ 0.56
CCM2-203ENST00000461377 NUDT9Q9BW91 350 aa18.56■□□□□ 0.56
CCM2-203ENST00000461377 BARHL1Q9BZE3 327 aa18.56■□□□□ 0.56
CCM2-203ENST00000461377 YARS2Q9Y2Z4 477 aaKnown RBP18.56■□□□□ 0.56
CCM2-203ENST00000461377 ZC3H12DA2A288 527 aaKnown RBP18.55■□□□□ 0.56
CCM2-203ENST00000461377 GNB5O14775 395 aa18.55■□□□□ 0.56
CCM2-203ENST00000461377 UTS2O95399 124 aa18.55■□□□□ 0.56
CCM2-203ENST00000461377 GABRA5P31644 462 aa18.55■□□□□ 0.56
CCM2-203ENST00000461377 ETV6P41212 452 aa18.55■□□□□ 0.56
CCM2-203ENST00000461377 ZNF45Q02386 682 aa18.55■□□□□ 0.56
CCM2-203ENST00000461377 ZNF791Q3KP31 576 aaPredicted RBP18.55■□□□□ 0.56
CCM2-203ENST00000461377 C1orf189Q5VU69 101 aa18.55■□□□□ 0.56
CCM2-203ENST00000461377 B3GLCTQ6Y288 498 aa18.55■□□□□ 0.56
CCM2-203ENST00000461377 TMEM203Q969S6 136 aa18.55■□□□□ 0.56
CCM2-203ENST00000461377 CCNL2Q96S94 520 aaPredicted RBP18.55■□□□□ 0.56
CCM2-203ENST00000461377 EXOSC3Q9NQT5 275 aaKnown RBP18.55■□□□□ 0.56
CCM2-203ENST00000461377 QPCTLQ9NXS2 382 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms