RNA–Protein interactions for RNA: ENST00000456545.5

PDLIM2-215, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-215ENST00000456545 HNRNPCL2B2RXH8 293 aa16.22■□□□□ 0.19
PDLIM2-215ENST00000456545 HNRNPCL3B7ZW38 293 aa16.22■□□□□ 0.19
PDLIM2-215ENST00000456545 EFNA2O43921 213 aa16.22■□□□□ 0.19
PDLIM2-215ENST00000456545 HNRNPCL1O60812 293 aaKnown RBP16.22■□□□□ 0.19
PDLIM2-215ENST00000456545 TFPTP0C1Z6 253 aa16.22■□□□□ 0.19
PDLIM2-215ENST00000456545 PABPC4LP0CB38 370 aaKnown RBP16.22■□□□□ 0.19
PDLIM2-215ENST00000456545 HNRNPCL4P0DMR1 293 aa16.22■□□□□ 0.19
PDLIM2-215ENST00000456545 TFPIP10646 304 aa16.22■□□□□ 0.19
PDLIM2-215ENST00000456545 IDH2P48735 452 aaKnown RBP16.22■□□□□ 0.19
PDLIM2-215ENST00000456545 MVDP53602 400 aa16.22■□□□□ 0.19
PDLIM2-215ENST00000456545 SLC25A53Q5H9E4 307 aa16.22■□□□□ 0.19
PDLIM2-215ENST00000456545 LRIF1Q5T3J3 769 aa16.22■□□□□ 0.19
PDLIM2-215ENST00000456545 ACBD4Q8NC06 268 aa16.22■□□□□ 0.19
PDLIM2-215ENST00000456545 CNOT9Q92600 299 aaKnown RBP16.22■□□□□ 0.19
PDLIM2-215ENST00000456545 TMEM19Q96HH6 336 aa16.22■□□□□ 0.19
PDLIM2-215ENST00000456545 TREX2Q9BQ50 279 aaPredicted RBP16.22■□□□□ 0.19
PDLIM2-215ENST00000456545 EXOSC3Q9NQT5 275 aaKnown RBP16.22■□□□□ 0.19
PDLIM2-215ENST00000456545 SLAMF8Q9P0V8 285 aa16.22■□□□□ 0.19
PDLIM2-215ENST00000456545 CORO2BQ9UQ03 480 aa16.22■□□□□ 0.19
PDLIM2-215ENST00000456545 EMC9Q9Y3B6 208 aa16.22■□□□□ 0.19
PDLIM2-215ENST00000456545 SPIN1Q9Y657 262 aaPredicted RBP16.22■□□□□ 0.19
PDLIM2-215ENST00000456545 PKDREJQ9NTG1 2253 aa16.21■□□□□ 0.19
PDLIM2-215ENST00000456545 HEATR5AQ86XA9 2040 aa16.21■□□□□ 0.19
PDLIM2-215ENST00000456545 TUBAL3A6NHL2 446 aa16.21■□□□□ 0.19
PDLIM2-215ENST00000456545 MSTNO14793 375 aa16.21■□□□□ 0.19
PDLIM2-215ENST00000456545 AQP8O94778 261 aa16.21■□□□□ 0.19
PDLIM2-215ENST00000456545 NID1P14543 1247 aa16.21■□□□□ 0.19
PDLIM2-215ENST00000456545 CPOXP36551 454 aa16.21■□□□□ 0.19
PDLIM2-215ENST00000456545 APOBEC1P41238 236 aaKnown RBP16.21■□□□□ 0.19
PDLIM2-215ENST00000456545 KCNJ5P48544 419 aa16.21■□□□□ 0.19
PDLIM2-215ENST00000456545 CTU2Q2VPK5 515 aaKnown RBP16.21■□□□□ 0.19
PDLIM2-215ENST00000456545 LIN52Q52LA3 116 aa16.21■□□□□ 0.19
PDLIM2-215ENST00000456545 MRPL2Q5T653 305 aaKnown RBP16.21■□□□□ 0.19
PDLIM2-215ENST00000456545 C3orf33Q6P1S2 294 aa16.21■□□□□ 0.19
PDLIM2-215ENST00000456545 VWA1Q6PCB0 445 aa16.21■□□□□ 0.19
PDLIM2-215ENST00000456545 PLEKHM3Q6ZWE6 761 aa16.21■□□□□ 0.19
PDLIM2-215ENST00000456545 BTLAQ7Z6A9 289 aa16.21■□□□□ 0.19
PDLIM2-215ENST00000456545 ZNF440Q8IYI8 595 aa16.21■□□□□ 0.19
PDLIM2-215ENST00000456545 ROBO4Q8WZ75 1007 aa16.21■□□□□ 0.19
PDLIM2-215ENST00000456545 CPNE4Q96A23 557 aaPredicted RBP16.21■□□□□ 0.19
PDLIM2-215ENST00000456545 STARD4Q96DR4 205 aa16.21■□□□□ 0.19
PDLIM2-215ENST00000456545 ADGRG7Q96K78 797 aa16.21■□□□□ 0.19
PDLIM2-215ENST00000456545 OR5B2Q96R09 309 aa16.21■□□□□ 0.19
PDLIM2-215ENST00000456545 GLRX2Q9NS18 164 aa16.21■□□□□ 0.19
PDLIM2-215ENST00000456545 MRGBPQ9NV56 204 aa16.21■□□□□ 0.19
PDLIM2-215ENST00000456545 JKAMPQ9P055 326 aa16.21■□□□□ 0.19
PDLIM2-215ENST00000456545 CLEC4AQ9UMR7 237 aa16.21■□□□□ 0.19
PDLIM2-215ENST00000456545 PROCRQ9UNN8 238 aa16.21■□□□□ 0.19
PDLIM2-215ENST00000456545 IFT52Q9Y366 437 aa16.21■□□□□ 0.19
PDLIM2-215ENST00000456545 CRYBG3Q68DQ2 2970 aa16.21■□□□□ 0.19
PDLIM2-215ENST00000456545 CFAP73A6NFT4 308 aa16.2■□□□□ 0.18
PDLIM2-215ENST00000456545 TNFSF13O75888 250 aa16.2■□□□□ 0.18
PDLIM2-215ENST00000456545 SHC1P29353 583 aa16.2■□□□□ 0.18
PDLIM2-215ENST00000456545 KIR2DL2P43627 348 aaPredicted RBP16.2■□□□□ 0.18
PDLIM2-215ENST00000456545 HTR3AP46098 478 aa16.2■□□□□ 0.18
PDLIM2-215ENST00000456545 ZSWIM7Q19AV6 140 aa16.2■□□□□ 0.18
PDLIM2-215ENST00000456545 RPS26P11Q5JNZ5 115 aaPredicted RBP16.2■□□□□ 0.18
PDLIM2-215ENST00000456545 GCNT6Q5T4J0 391 aa16.2■□□□□ 0.18
PDLIM2-215ENST00000456545 FAM214BQ7L5A3 538 aa16.2■□□□□ 0.18
PDLIM2-215ENST00000456545 TMEM200AQ86VY9 491 aa16.2■□□□□ 0.18
PDLIM2-215ENST00000456545 VRK2Q86Y07 508 aa16.2■□□□□ 0.18
PDLIM2-215ENST00000456545 ZZZ3Q8IYH5 903 aa16.2■□□□□ 0.18
PDLIM2-215ENST00000456545 FAM71CQ8NEG0 241 aa16.2■□□□□ 0.18
PDLIM2-215ENST00000456545 GMPPAQ96IJ6 420 aaPredicted RBP16.2■□□□□ 0.18
PDLIM2-215ENST00000456545 SLC39A3Q9BRY0 314 aa16.2■□□□□ 0.18
PDLIM2-215ENST00000456545 MCCC2Q9HCC0 563 aa16.2■□□□□ 0.18
PDLIM2-215ENST00000456545 A4GALTQ9NPC4 353 aa16.2■□□□□ 0.18
PDLIM2-215ENST00000456545 SLC52A3Q9NQ40 469 aa16.2■□□□□ 0.18
PDLIM2-215ENST00000456545 SLC25A37Q9NYZ2 338 aa16.2■□□□□ 0.18
PDLIM2-215ENST00000456545 VAPAQ9P0L0 249 aa16.2■□□□□ 0.18
PDLIM2-215ENST00000456545 A0A1W2PNR3 127 aa16.19■□□□□ 0.18
PDLIM2-215ENST00000456545 A8MXE2 369 aa16.19■□□□□ 0.18
PDLIM2-215ENST00000456545 DNAJA2O60884 412 aa16.19■□□□□ 0.18
PDLIM2-215ENST00000456545 BCAS1O75363 584 aaPredicted RBP16.19■□□□□ 0.18
PDLIM2-215ENST00000456545 NTN1O95631 604 aa16.19■□□□□ 0.18
PDLIM2-215ENST00000456545 NUDT7P0C024 238 aa16.19■□□□□ 0.18
PDLIM2-215ENST00000456545 CCNA2P20248 432 aa16.19■□□□□ 0.18
PDLIM2-215ENST00000456545 RPS4Y1P22090 263 aaKnown RBP16.19■□□□□ 0.18
PDLIM2-215ENST00000456545 MDH1P40925 334 aaKnown RBP16.19■□□□□ 0.18
PDLIM2-215ENST00000456545 COPZ1P61923 177 aa16.19■□□□□ 0.18
PDLIM2-215ENST00000456545 NFYCQ13952 458 aa16.19■□□□□ 0.18
PDLIM2-215ENST00000456545 ZNF311Q5JNZ3 666 aa16.19■□□□□ 0.18
PDLIM2-215ENST00000456545 TMEM201Q5SNT2 666 aa16.19■□□□□ 0.18
PDLIM2-215ENST00000456545 FBXW10Q5XX13 1052 aa16.19■□□□□ 0.18
PDLIM2-215ENST00000456545 GRINAQ7Z429 371 aa16.19■□□□□ 0.18
PDLIM2-215ENST00000456545 DHDDSQ86SQ9 333 aa16.19■□□□□ 0.18
PDLIM2-215ENST00000456545 BBS10Q8TAM1 723 aa16.19■□□□□ 0.18
PDLIM2-215ENST00000456545 TSPEARQ8WU66 669 aa16.19■□□□□ 0.18
PDLIM2-215ENST00000456545 SLC25A43Q8WUT9 341 aaPredicted RBP16.19■□□□□ 0.18
PDLIM2-215ENST00000456545 MAL2Q969L2 176 aa16.19■□□□□ 0.18
PDLIM2-215ENST00000456545 ZNF524Q96C55 264 aa16.19■□□□□ 0.18
PDLIM2-215ENST00000456545 OPN3Q9H1Y3 402 aaPredicted RBP16.19■□□□□ 0.18
PDLIM2-215ENST00000456545 CTPS2Q9NRF8 586 aa16.19■□□□□ 0.18
PDLIM2-215ENST00000456545 RLIMQ9NVW2 624 aa16.19■□□□□ 0.18
PDLIM2-215ENST00000456545 DNAJB12Q9NXW2 375 aaKnown RBP16.19■□□□□ 0.18
PDLIM2-215ENST00000456545 GALNT8Q9NY28 637 aa16.19■□□□□ 0.18
PDLIM2-215ENST00000456545 CRIM1Q9NZV1 1036 aa16.19■□□□□ 0.18
PDLIM2-215ENST00000456545 NDRG3Q9UGV2 375 aa16.19■□□□□ 0.18
PDLIM2-215ENST00000456545 ZNF443Q9Y2A4 671 aaPredicted RBP16.19■□□□□ 0.18
PDLIM2-215ENST00000456545 CELSR2Q9HCU4 2923 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms