RNA–Protein interactions for RNA: ENST00000455111.1

GPC1-206, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-206ENST00000455111 LSM12Q3MHD2 195 aaKnown RBP14.2□□□□□ -0.14
GPC1-206ENST00000455111 SPDYE7PQ495Y7 208 aa14.2□□□□□ -0.14
GPC1-206ENST00000455111 TIGD2Q4W5G0 525 aa14.2□□□□□ -0.14
GPC1-206ENST00000455111 TMEM201Q5SNT2 666 aa14.2□□□□□ -0.14
GPC1-206ENST00000455111 PDSS1Q5T2R2 415 aa14.2□□□□□ -0.14
GPC1-206ENST00000455111 AP1ARQ63HQ0 302 aa14.2□□□□□ -0.14
GPC1-206ENST00000455111 DNM1P46Q6ZS02 220 aa14.2□□□□□ -0.14
GPC1-206ENST00000455111 ANKRD46Q86W74 232 aa14.2□□□□□ -0.14
GPC1-206ENST00000455111 STEAP2Q8NFT2 490 aa14.2□□□□□ -0.14
GPC1-206ENST00000455111 PIWIL2Q8TC59 973 aaKnown RBP14.2□□□□□ -0.14
GPC1-206ENST00000455111 TMEM171Q8WVE6 324 aa14.2□□□□□ -0.14
GPC1-206ENST00000455111 ZBTB9Q96C00 473 aa14.2□□□□□ -0.14
GPC1-206ENST00000455111 DNAJA3Q96EY1 480 aa14.2□□□□□ -0.14
GPC1-206ENST00000455111 LAT2Q9GZY6 243 aa14.2□□□□□ -0.14
GPC1-206ENST00000455111 OR51I1Q9H343 314 aa14.2□□□□□ -0.14
GPC1-206ENST00000455111 HHATLQ9HCP6 504 aa14.2□□□□□ -0.14
GPC1-206ENST00000455111 MAGED1Q9Y5V3 778 aaPredicted RBP14.2□□□□□ -0.14
GPC1-206ENST00000455111 CADP27708 2225 aa14.19□□□□□ -0.14
GPC1-206ENST00000455111 RNF103-CHMP3A0A140T963 221 aa14.19□□□□□ -0.14
GPC1-206ENST00000455111 WDR91A4D1P6 747 aa14.19□□□□□ -0.14
GPC1-206ENST00000455111 ZNF716A6NP11 495 aa14.19□□□□□ -0.14
GPC1-206ENST00000455111 GTPBP1O00178 669 aaKnown RBP14.19□□□□□ -0.14
GPC1-206ENST00000455111 CFLARO15519 480 aa14.19□□□□□ -0.14
GPC1-206ENST00000455111 LYZL6O75951 148 aa14.19□□□□□ -0.14
GPC1-206ENST00000455111 SOAT1P35610 550 aa14.19□□□□□ -0.14
GPC1-206ENST00000455111 SESN3P58005 492 aa14.19□□□□□ -0.14
GPC1-206ENST00000455111 BSPH1Q075Z2 132 aa14.19□□□□□ -0.14
GPC1-206ENST00000455111 PDCD2Q16342 344 aaPredicted RBP14.19□□□□□ -0.14
GPC1-206ENST00000455111 PGS1Q32NB8 556 aa14.19□□□□□ -0.14
GPC1-206ENST00000455111 ABLIM2Q6H8Q1 611 aa14.19□□□□□ -0.14
GPC1-206ENST00000455111 FRRS1Q6ZNA5 592 aa14.19□□□□□ -0.14
GPC1-206ENST00000455111 STK32CQ86UX6 486 aa14.19□□□□□ -0.14
GPC1-206ENST00000455111 MIPOL1Q8TD10 442 aa14.19□□□□□ -0.14
GPC1-206ENST00000455111 RAB8BQ92930 207 aa14.19□□□□□ -0.14
GPC1-206ENST00000455111 MOAP1Q96BY2 351 aa14.19□□□□□ -0.14
GPC1-206ENST00000455111 SLC35G5Q96KT7 338 aa14.19□□□□□ -0.14
GPC1-206ENST00000455111 TEX37Q96LM6 180 aa14.19□□□□□ -0.14
GPC1-206ENST00000455111 TRIM2Q9C040 744 aa14.19□□□□□ -0.14
GPC1-206ENST00000455111 GP6Q9HCN6 339 aa14.19□□□□□ -0.14
GPC1-206ENST00000455111 ATAD3AQ9NVI7 634 aa14.19□□□□□ -0.14
GPC1-206ENST00000455111 RNF115Q9Y4L5 304 aa14.19□□□□□ -0.14
GPC1-206ENST00000455111 TLN2Q9Y4G6 2542 aa14.19□□□□□ -0.14
GPC1-206ENST00000455111 YLPM1P49750 1951 aaKnown RBP14.18□□□□□ -0.14
GPC1-206ENST00000455111 SHISA9B4DS77 424 aa14.18□□□□□ -0.14
GPC1-206ENST00000455111 KIAA0513O60268 411 aa14.18□□□□□ -0.14
GPC1-206ENST00000455111 IGHV4-39P01824 125 aa14.18□□□□□ -0.14
GPC1-206ENST00000455111 FESP07332 822 aa14.18□□□□□ -0.14
GPC1-206ENST00000455111 DHRS4L1P0CG22 281 aa14.18□□□□□ -0.14
GPC1-206ENST00000455111 OR12D1P0DN82 309 aa14.18□□□□□ -0.14
GPC1-206ENST00000455111 COX5AP20674 150 aa14.18□□□□□ -0.14
GPC1-206ENST00000455111 CCR4P51679 360 aa14.18□□□□□ -0.14
GPC1-206ENST00000455111 ATP5J2P56134 94 aa14.18□□□□□ -0.14
GPC1-206ENST00000455111 ITGADQ13349 1161 aa14.18□□□□□ -0.14
GPC1-206ENST00000455111 ZNF672Q499Z4 452 aaPredicted RBP14.18□□□□□ -0.14
GPC1-206ENST00000455111 GTF2IRD2BQ6EKJ0 949 aa14.18□□□□□ -0.14
GPC1-206ENST00000455111 Q6ZT83 130 aa14.18□□□□□ -0.14
GPC1-206ENST00000455111 BHLHA15Q7RTS1 189 aaPredicted RBP14.18□□□□□ -0.14
GPC1-206ENST00000455111 GTF2IRD2Q86UP8 949 aa14.18□□□□□ -0.14
GPC1-206ENST00000455111 NATD1Q8N6N6 113 aa14.18□□□□□ -0.14
GPC1-206ENST00000455111 TMCO5AQ8N6Q1 288 aa14.18□□□□□ -0.14
GPC1-206ENST00000455111 TOR1AIP2Q8NFQ8 470 aa14.18□□□□□ -0.14
GPC1-206ENST00000455111 OR8J2Q8NGG1 315 aa14.18□□□□□ -0.14
GPC1-206ENST00000455111 ARL5BQ96KC2 179 aa14.18□□□□□ -0.14
GPC1-206ENST00000455111 OR5B2Q96R09 309 aa14.18□□□□□ -0.14
GPC1-206ENST00000455111 TMEM109Q9BVC6 243 aa14.18□□□□□ -0.14
GPC1-206ENST00000455111 CCDC106Q9BWC9 280 aa14.18□□□□□ -0.14
GPC1-206ENST00000455111 ROPN1BQ9BZX4 212 aaPredicted RBP14.18□□□□□ -0.14
GPC1-206ENST00000455111 SAP130Q9H0E3 1048 aa14.18□□□□□ -0.14
GPC1-206ENST00000455111 ROPN1Q9HAT0 212 aaPredicted RBP14.18□□□□□ -0.14
GPC1-206ENST00000455111 GDF2Q9UK05 429 aaPredicted RBP14.18□□□□□ -0.14
GPC1-206ENST00000455111 CHD3Q12873 2000 aaKnown RBP14.18□□□□□ -0.14
GPC1-206ENST00000455111 CSPG4Q6UVK1 2322 aa14.18□□□□□ -0.14
GPC1-206ENST00000455111 UQCRHLA0A096LP55 91 aa14.17□□□□□ -0.14
GPC1-206ENST00000455111 FAM171A2A8MVW0 826 aa14.17□□□□□ -0.14
GPC1-206ENST00000455111 H3BNH8 94 aa14.17□□□□□ -0.14
GPC1-206ENST00000455111 RNASET2O00584 256 aaKnown RBP14.17□□□□□ -0.14
GPC1-206ENST00000455111 CLOCKO15516 846 aa14.17□□□□□ -0.14
GPC1-206ENST00000455111 CYP7B1O75881 506 aa14.17□□□□□ -0.14
GPC1-206ENST00000455111 KRT16P08779 473 aa14.17□□□□□ -0.14
GPC1-206ENST00000455111 ALDOCP09972 364 aaKnown RBP14.17□□□□□ -0.14
GPC1-206ENST00000455111 PABPC4LP0CB38 370 aaKnown RBP14.17□□□□□ -0.14
GPC1-206ENST00000455111 UBTFL6P0CB48 400 aaPredicted RBP14.17□□□□□ -0.14
GPC1-206ENST00000455111 PTNP21246 168 aa14.17□□□□□ -0.14
GPC1-206ENST00000455111 IL12AP29459 219 aa14.17□□□□□ -0.14
GPC1-206ENST00000455111 DIO1P49895 249 aa14.17□□□□□ -0.14
GPC1-206ENST00000455111 RPS4XP62701 263 aaKnown RBP14.17□□□□□ -0.14
GPC1-206ENST00000455111 SPOCK1Q08629 439 aa14.17□□□□□ -0.14
GPC1-206ENST00000455111 RASGEF1BQ0VAM2 473 aa14.17□□□□□ -0.14
GPC1-206ENST00000455111 CBFBQ13951 182 aa14.17□□□□□ -0.14
GPC1-206ENST00000455111 MAPK11Q15759 364 aa14.17□□□□□ -0.14
GPC1-206ENST00000455111 SAXO2Q658L1 398 aa14.17□□□□□ -0.14
GPC1-206ENST00000455111 EMBQ6PCB8 327 aa14.17□□□□□ -0.14
GPC1-206ENST00000455111 HDHD5Q9BXW7 423 aa14.17□□□□□ -0.14
GPC1-206ENST00000455111 POTEKPQ9BYX7 375 aa14.17□□□□□ -0.14
GPC1-206ENST00000455111 TIGARQ9NQ88 270 aa14.17□□□□□ -0.14
GPC1-206ENST00000455111 CTPS2Q9NRF8 586 aa14.17□□□□□ -0.14
GPC1-206ENST00000455111 ACER3Q9NUN7 267 aa14.17□□□□□ -0.14
GPC1-206ENST00000455111 NOP53Q9NZM5 478 aaKnown RBP14.17□□□□□ -0.14
GPC1-206ENST00000455111 GOLGA8QA0A0J9YX86 632 aa14.16□□□□□ -0.14
GPC1-206ENST00000455111 GOLGA8OA6NCC3 632 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms