RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 WNT4P56705 351 aa12.57□□□□□ -0.4
CLK3-203ENST00000454830 CCL7P80098 99 aa12.57□□□□□ -0.4
CLK3-203ENST00000454830 PLCXD2Q0VAA5 305 aa12.57□□□□□ -0.4
CLK3-203ENST00000454830 FGFBP1Q14512 234 aa12.57□□□□□ -0.4
CLK3-203ENST00000454830 LRRC17Q8N6Y2 441 aa12.57□□□□□ -0.4
CLK3-203ENST00000454830 ZNF615Q8N8J6 731 aa12.57□□□□□ -0.4
CLK3-203ENST00000454830 S100ZQ8WXG8 99 aa12.57□□□□□ -0.4
CLK3-203ENST00000454830 ATOH1Q92858 354 aaPredicted RBP12.57□□□□□ -0.4
CLK3-203ENST00000454830 NUDT9Q9BW91 350 aa12.57□□□□□ -0.4
CLK3-203ENST00000454830 TBL1XR1Q9BZK7 514 aa12.57□□□□□ -0.4
CLK3-203ENST00000454830 MRTO4Q9UKD2 239 aaKnown RBP12.57□□□□□ -0.4
CLK3-203ENST00000454830 CFL2Q9Y281 166 aa12.57□□□□□ -0.4
CLK3-203ENST00000454830 KNTC1P50748 2209 aa12.56□□□□□ -0.4
CLK3-203ENST00000454830 TRIM64BA6NI03 449 aa12.56□□□□□ -0.4
CLK3-203ENST00000454830 UTS2O95399 124 aa12.56□□□□□ -0.4
CLK3-203ENST00000454830 CELP19835 753 aa12.56□□□□□ -0.4
CLK3-203ENST00000454830 ACAA2P42765 397 aaKnown RBP12.56□□□□□ -0.4
CLK3-203ENST00000454830 IGLV3-21P80748 117 aaPredicted RBP12.56□□□□□ -0.4
CLK3-203ENST00000454830 RUNX1T1Q06455 604 aa12.56□□□□□ -0.4
CLK3-203ENST00000454830 DOC2BQ14184 412 aa12.56□□□□□ -0.4
CLK3-203ENST00000454830 PRPF38BQ5VTL8 546 aaKnown RBP12.56□□□□□ -0.4
CLK3-203ENST00000454830 C22orf42Q6IC83 251 aa12.56□□□□□ -0.4
CLK3-203ENST00000454830 LCORQ96JN0 433 aaPredicted RBP12.56□□□□□ -0.4
CLK3-203ENST00000454830 ZNF578Q96N58 590 aaPredicted RBP12.56□□□□□ -0.4
CLK3-203ENST00000454830 DUSP23Q9BVJ7 150 aa12.56□□□□□ -0.4
CLK3-203ENST00000454830 TMED9Q9BVK6 235 aa12.56□□□□□ -0.4
CLK3-203ENST00000454830 PMF1-BGLAPU3KQ54 211 aa12.56□□□□□ -0.4
CLK3-203ENST00000454830 ZGLP1P0C6A0 271 aa12.56□□□□□ -0.4
CLK3-203ENST00000454830 BMP4P12644 408 aa12.56□□□□□ -0.4
CLK3-203ENST00000454830 CD79BP40259 229 aa12.56□□□□□ -0.4
CLK3-203ENST00000454830 PLAURQ03405 335 aa12.56□□□□□ -0.4
CLK3-203ENST00000454830 TRIM16LQ309B1 348 aa12.56□□□□□ -0.4
CLK3-203ENST00000454830 CBLN3Q6UW01 205 aa12.56□□□□□ -0.4
CLK3-203ENST00000454830 POGLUT1Q8NBL1 392 aa12.56□□□□□ -0.4
CLK3-203ENST00000454830 SMAP2Q8WU79 429 aaPredicted RBP12.56□□□□□ -0.4
CLK3-203ENST00000454830 SGTBQ96EQ0 304 aa12.56□□□□□ -0.4
CLK3-203ENST00000454830 SLC46A1Q96NT5 459 aa12.56□□□□□ -0.4
CLK3-203ENST00000454830 OR1F2PQ96R84 312 aa12.56□□□□□ -0.4
CLK3-203ENST00000454830 TM9SF2Q99805 663 aa12.56□□□□□ -0.4
CLK3-203ENST00000454830 CTRCQ99895 268 aa12.56□□□□□ -0.4
CLK3-203ENST00000454830 TAPBPLQ9BX59 468 aa12.56□□□□□ -0.4
CLK3-203ENST00000454830 VN1R1Q9GZP7 353 aa12.56□□□□□ -0.4
CLK3-203ENST00000454830 RAB33BQ9H082 229 aa12.56□□□□□ -0.4
CLK3-203ENST00000454830 FMO6PO60774 539 aa12.56□□□□□ -0.4
CLK3-203ENST00000454830 UBL4AP11441 157 aa12.56□□□□□ -0.4
CLK3-203ENST00000454830 SLC37A1P57057 533 aa12.56□□□□□ -0.4
CLK3-203ENST00000454830 FOXK2Q01167 660 aa12.56□□□□□ -0.4
CLK3-203ENST00000454830 PRKCDQ05655 676 aa12.56□□□□□ -0.4
CLK3-203ENST00000454830 ELAVL1Q15717 326 aaKnown RBP12.56□□□□□ -0.4
CLK3-203ENST00000454830 RGS21Q2M5E4 152 aa12.56□□□□□ -0.4
CLK3-203ENST00000454830 OR52E2Q8NGJ4 325 aa12.56□□□□□ -0.4
CLK3-203ENST00000454830 OR6Q1Q8NGQ2 317 aa12.56□□□□□ -0.4
CLK3-203ENST00000454830 UFD1Q92890 307 aa12.56□□□□□ -0.4
CLK3-203ENST00000454830 MVB12AQ96EY5 273 aa12.56□□□□□ -0.4
CLK3-203ENST00000454830 KLHL1Q9NR64 748 aa12.56□□□□□ -0.4
CLK3-203ENST00000454830 EXOSC1Q9Y3B2 195 aaKnown RBP12.56□□□□□ -0.4
CLK3-203ENST00000454830 FITM1A5D6W6 292 aa12.55□□□□□ -0.4
CLK3-203ENST00000454830 C12orf71A8MTZ7 269 aa12.55□□□□□ -0.4
CLK3-203ENST00000454830 DSCR3O14972 297 aa12.55□□□□□ -0.4
CLK3-203ENST00000454830 GIMD1P0DJR0 217 aa12.55□□□□□ -0.4
CLK3-203ENST00000454830 CLUP10909 449 aa12.55□□□□□ -0.4
CLK3-203ENST00000454830 ZNF3P17036 446 aa12.55□□□□□ -0.4
CLK3-203ENST00000454830 SLC6A6P31641 620 aa12.55□□□□□ -0.4
CLK3-203ENST00000454830 CRMP1Q14194 572 aa12.55□□□□□ -0.4
CLK3-203ENST00000454830 CD226Q15762 336 aa12.55□□□□□ -0.4
CLK3-203ENST00000454830 TMPRSS9Q7Z410 1059 aa12.55□□□□□ -0.4
CLK3-203ENST00000454830 KLBQ86Z14 1044 aa12.55□□□□□ -0.4
CLK3-203ENST00000454830 SDR9C7Q8NEX9 313 aa12.55□□□□□ -0.4
CLK3-203ENST00000454830 PMM1Q92871 262 aa12.55□□□□□ -0.4
CLK3-203ENST00000454830 SLIRPQ9GZT3 109 aaKnown RBP12.55□□□□□ -0.4
CLK3-203ENST00000454830 SEC14L4Q9UDX3 406 aa12.55□□□□□ -0.4
CLK3-203ENST00000454830 RARRES3Q9UL19 164 aa12.55□□□□□ -0.4
CLK3-203ENST00000454830 DAPL1A0PJW8 107 aa12.55□□□□□ -0.4
CLK3-203ENST00000454830 PLD2O14939 933 aa12.55□□□□□ -0.4
CLK3-203ENST00000454830 CDRT1O95170 752 aa12.55□□□□□ -0.4
CLK3-203ENST00000454830 HEXBP07686 556 aa12.55□□□□□ -0.4
CLK3-203ENST00000454830 OCM2P0CE71 109 aa12.55□□□□□ -0.4
CLK3-203ENST00000454830 OCMP0CE72 109 aaPredicted RBP12.55□□□□□ -0.4
CLK3-203ENST00000454830 GPR143P51810 404 aa12.55□□□□□ -0.4
CLK3-203ENST00000454830 SHBQ15464 509 aa12.55□□□□□ -0.4
CLK3-203ENST00000454830 TMEM71Q6P5X7 295 aa12.55□□□□□ -0.4
CLK3-203ENST00000454830 C16orf47Q6ZP98 133 aaPredicted RBP12.55□□□□□ -0.4
CLK3-203ENST00000454830 RTL4Q6ZR62 310 aa12.55□□□□□ -0.4
CLK3-203ENST00000454830 KLHL36Q8N4N3 616 aa12.55□□□□□ -0.4
CLK3-203ENST00000454830 OR7G1Q8NGA0 311 aa12.55□□□□□ -0.4
CLK3-203ENST00000454830 FNDC8Q8TC99 324 aa12.55□□□□□ -0.4
CLK3-203ENST00000454830 STT3BQ8TCJ2 826 aa12.55□□□□□ -0.4
CLK3-203ENST00000454830 METTL21AQ8WXB1 218 aa12.55□□□□□ -0.4
CLK3-203ENST00000454830 NECAB3Q96P71 396 aaPredicted RBP12.55□□□□□ -0.4
CLK3-203ENST00000454830 HCAR1Q9BXC0 346 aa12.55□□□□□ -0.4
CLK3-203ENST00000454830 ZNF223Q9UK11 482 aaPredicted RBP12.55□□□□□ -0.4
CLK3-203ENST00000454830 SIGLEC7Q9Y286 467 aa12.55□□□□□ -0.4
CLK3-203ENST00000454830 TMEM131Q92545 1883 aa12.55□□□□□ -0.4
CLK3-203ENST00000454830 OIP5O43482 229 aa12.55□□□□□ -0.4
CLK3-203ENST00000454830 NDUFB5O43674 189 aa12.55□□□□□ -0.4
CLK3-203ENST00000454830 SCRG1O75711 98 aa12.55□□□□□ -0.4
CLK3-203ENST00000454830 IFNGP01579 166 aa12.55□□□□□ -0.4
CLK3-203ENST00000454830 SLC1A3P43003 542 aa12.55□□□□□ -0.4
CLK3-203ENST00000454830 PPICP45877 212 aa12.55□□□□□ -0.4
CLK3-203ENST00000454830 C3orf38Q5JPI3 329 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms