RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 MEIOBQ8N635 442 aa25.22■■□□□ 1.63
SMARCC1-203ENST00000454240 UCN2Q96RP3 112 aa25.22■■□□□ 1.63
SMARCC1-203ENST00000454240 CALHM2Q9HA72 323 aa25.22■■□□□ 1.63
SMARCC1-203ENST00000454240 PRDM4Q9UKN5 801 aa25.22■■□□□ 1.63
SMARCC1-203ENST00000454240 BAHCC1Q9P281 2608 aa25.22■■□□□ 1.63
SMARCC1-203ENST00000454240 COL12A1Q99715 3063 aa25.21■■□□□ 1.63
SMARCC1-203ENST00000454240 CFAP73A6NFT4 308 aa25.21■■□□□ 1.63
SMARCC1-203ENST00000454240 CD8B2A6NJW9 211 aa25.21■■□□□ 1.63
SMARCC1-203ENST00000454240 H0YC42 278 aa25.21■■□□□ 1.63
SMARCC1-203ENST00000454240 MFN2O95140 757 aa25.21■■□□□ 1.63
SMARCC1-203ENST00000454240 ACAA2P42765 397 aaKnown RBP25.21■■□□□ 1.63
SMARCC1-203ENST00000454240 TPD52P55327 224 aaPredicted RBP25.21■■□□□ 1.63
SMARCC1-203ENST00000454240 ERICH5Q6P6B1 374 aa25.21■■□□□ 1.63
SMARCC1-203ENST00000454240 ZNF563Q8TA94 476 aa25.21■■□□□ 1.63
SMARCC1-203ENST00000454240 ITLN2Q8WWU7 325 aaPredicted RBP25.21■■□□□ 1.63
SMARCC1-203ENST00000454240 SMPDL3BQ92485 455 aa25.21■■□□□ 1.63
SMARCC1-203ENST00000454240 SLC35B4Q969S0 331 aa25.21■■□□□ 1.63
SMARCC1-203ENST00000454240 TAGLN3Q9UI15 199 aa25.21■■□□□ 1.63
SMARCC1-203ENST00000454240 USP22Q9UPT9 525 aa25.21■■□□□ 1.63
SMARCC1-203ENST00000454240 PRORSD1PA6NEY8 169 aa25.2■■□□□ 1.62
SMARCC1-203ENST00000454240 CCT8L1PA6NM43 557 aa25.2■■□□□ 1.62
SMARCC1-203ENST00000454240 M0QX08 132 aa25.2■■□□□ 1.62
SMARCC1-203ENST00000454240 TPST1O60507 370 aa25.2■■□□□ 1.62
SMARCC1-203ENST00000454240 GKN3PP0CG01 181 aa25.2■■□□□ 1.62
SMARCC1-203ENST00000454240 IDH2P48735 452 aaKnown RBP25.2■■□□□ 1.62
SMARCC1-203ENST00000454240 SMSP52788 366 aa25.2■■□□□ 1.62
SMARCC1-203ENST00000454240 EEFSECP57772 596 aaKnown RBP25.2■■□□□ 1.62
SMARCC1-203ENST00000454240 VEZF1Q14119 521 aa25.2■■□□□ 1.62
SMARCC1-203ENST00000454240 KRT72Q14CN4 511 aa25.2■■□□□ 1.62
SMARCC1-203ENST00000454240 INTS11Q5TA45 600 aaKnown RBP25.2■■□□□ 1.62
SMARCC1-203ENST00000454240 PLEKHM3Q6ZWE6 761 aa25.2■■□□□ 1.62
SMARCC1-203ENST00000454240 CCDC80Q76M96 950 aa25.2■■□□□ 1.62
SMARCC1-203ENST00000454240 ZNF550Q7Z398 422 aa25.2■■□□□ 1.62
SMARCC1-203ENST00000454240 MRGPRGQ86SM5 289 aa25.2■■□□□ 1.62
SMARCC1-203ENST00000454240 LACC1Q8IV20 430 aa25.2■■□□□ 1.62
SMARCC1-203ENST00000454240 LILRA2Q8N149 483 aa25.2■■□□□ 1.62
SMARCC1-203ENST00000454240 BCAS4Q8TDM0 211 aa25.2■■□□□ 1.62
SMARCC1-203ENST00000454240 RND1Q92730 232 aa25.2■■□□□ 1.62
SMARCC1-203ENST00000454240 DOCK7Q96N67 2140 aa25.2■■□□□ 1.62
SMARCC1-203ENST00000454240 TRIB1Q96RU8 372 aa25.2■■□□□ 1.62
SMARCC1-203ENST00000454240 LRRK2Q5S007 2527 aa25.19■■□□□ 1.62
SMARCC1-203ENST00000454240 CLCA1A8K7I4 914 aa25.19■■□□□ 1.62
SMARCC1-203ENST00000454240 FAM220BPB1ANY3 271 aa25.19■■□□□ 1.62
SMARCC1-203ENST00000454240 NDUFAB1O14561 156 aa25.19■■□□□ 1.62
SMARCC1-203ENST00000454240 SEC14L5O43304 696 aa25.19■■□□□ 1.62
SMARCC1-203ENST00000454240 GP1BBP13224 206 aa25.19■■□□□ 1.62
SMARCC1-203ENST00000454240 AGAP20933 346 aa25.19■■□□□ 1.62
SMARCC1-203ENST00000454240 ME2P23368 584 aa25.19■■□□□ 1.62
SMARCC1-203ENST00000454240 TIMP3P35625 211 aa25.19■■□□□ 1.62
SMARCC1-203ENST00000454240 CPA2P48052 419 aa25.19■■□□□ 1.62
SMARCC1-203ENST00000454240 DMTNQ08495 405 aa25.19■■□□□ 1.62
SMARCC1-203ENST00000454240 GLIPR1L2Q4G1C9 344 aa25.19■■□□□ 1.62
SMARCC1-203ENST00000454240 PATL1Q86TB9 770 aaKnown RBP25.19■■□□□ 1.62
SMARCC1-203ENST00000454240 ARMC8Q8IUR7 673 aa25.19■■□□□ 1.62
SMARCC1-203ENST00000454240 BHLHE22Q8NFJ8 381 aaPredicted RBP25.19■■□□□ 1.62
SMARCC1-203ENST00000454240 ADGRG7Q96K78 797 aa25.19■■□□□ 1.62
SMARCC1-203ENST00000454240 PINK1Q9BXM7 581 aa25.19■■□□□ 1.62
SMARCC1-203ENST00000454240 NME4O00746 187 aa25.18■■□□□ 1.62
SMARCC1-203ENST00000454240 ADAMDEC1O15204 470 aa25.18■■□□□ 1.62
SMARCC1-203ENST00000454240 TOXO94900 526 aa25.18■■□□□ 1.62
SMARCC1-203ENST00000454240 OPN1LWP04000 364 aa25.18■■□□□ 1.62
SMARCC1-203ENST00000454240 SLC7A2P52569 658 aa25.18■■□□□ 1.62
SMARCC1-203ENST00000454240 PSME3P61289 254 aa25.18■■□□□ 1.62
SMARCC1-203ENST00000454240 MERTKQ12866 999 aa25.18■■□□□ 1.62
SMARCC1-203ENST00000454240 SELENBP1Q13228 472 aa25.18■■□□□ 1.62
SMARCC1-203ENST00000454240 CTU2Q2VPK5 515 aaKnown RBP25.18■■□□□ 1.62
SMARCC1-203ENST00000454240 RIPPLY2Q5TAB7 128 aa25.18■■□□□ 1.62
SMARCC1-203ENST00000454240 XKRXQ6PP77 449 aa25.18■■□□□ 1.62
SMARCC1-203ENST00000454240 GRINAQ7Z429 371 aa25.18■■□□□ 1.62
SMARCC1-203ENST00000454240 COMTD1Q86VU5 262 aa25.18■■□□□ 1.62
SMARCC1-203ENST00000454240 ZNF808Q8N4W9 903 aaPredicted RBP25.18■■□□□ 1.62
SMARCC1-203ENST00000454240 OR2T12Q8NG77 320 aa25.18■■□□□ 1.62
SMARCC1-203ENST00000454240 TMEM185BQ9H7F4 350 aa25.18■■□□□ 1.62
SMARCC1-203ENST00000454240 CLCF1Q9UBD9 225 aa25.18■■□□□ 1.62
SMARCC1-203ENST00000454240 ABCD2Q9UBJ2 740 aa25.18■■□□□ 1.62
SMARCC1-203ENST00000454240 MED12LQ86YW9 2145 aa25.18■■□□□ 1.62
SMARCC1-203ENST00000454240 DOPEY2Q9Y3R5 2298 aa25.17■■□□□ 1.62
SMARCC1-203ENST00000454240 DOPEY1Q5JWR5 2465 aa25.17■■□□□ 1.62
SMARCC1-203ENST00000454240 MBD3L4A6NDZ8 208 aaPredicted RBP25.17■■□□□ 1.62
SMARCC1-203ENST00000454240 MBD3L3A6NE82 208 aaPredicted RBP25.17■■□□□ 1.62
SMARCC1-203ENST00000454240 MBD3L5A6NJ08 208 aaPredicted RBP25.17■■□□□ 1.62
SMARCC1-203ENST00000454240 PRG2P13727 222 aa25.17■■□□□ 1.62
SMARCC1-203ENST00000454240 UQCRBP14927 111 aa25.17■■□□□ 1.62
SMARCC1-203ENST00000454240 SHC1P29353 583 aa25.17■■□□□ 1.62
SMARCC1-203ENST00000454240 APOBEC1P41238 236 aaKnown RBP25.17■■□□□ 1.62
SMARCC1-203ENST00000454240 ESPNLQ6ZVH7 1005 aa25.17■■□□□ 1.62
SMARCC1-203ENST00000454240 CHMP1BQ7LBR1 199 aa25.17■■□□□ 1.62
SMARCC1-203ENST00000454240 MBD3L2Q8NHZ7 208 aaPredicted RBP25.17■■□□□ 1.62
SMARCC1-203ENST00000454240 A0A0G2JNJ9 132 aa25.16■■□□□ 1.62
SMARCC1-203ENST00000454240 A0A0J9YW62 118 aa25.16■■□□□ 1.62
SMARCC1-203ENST00000454240 ELOVL7A1L3X0 281 aa25.16■■□□□ 1.62
SMARCC1-203ENST00000454240 EIF1AYO14602 144 aaKnown RBP25.16■■□□□ 1.62
SMARCC1-203ENST00000454240 CEACAM8P31997 349 aaPredicted RBP25.16■■□□□ 1.62
SMARCC1-203ENST00000454240 SLC1A3P43003 542 aa25.16■■□□□ 1.62
SMARCC1-203ENST00000454240 CRYBA2P53672 197 aa25.16■■□□□ 1.62
SMARCC1-203ENST00000454240 RPS3AP61247 264 aaKnown RBP25.16■■□□□ 1.62
SMARCC1-203ENST00000454240 LIPEQ05469 1076 aa25.16■■□□□ 1.62
SMARCC1-203ENST00000454240 DUSP7Q16829 419 aa25.16■■□□□ 1.62
SMARCC1-203ENST00000454240 MICU2Q8IYU8 434 aa25.16■■□□□ 1.62
SMARCC1-203ENST00000454240 TNIP2Q8NFZ5 429 aa25.16■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms