RNA–Protein interactions for RNA: ENST00000453046.5

SQSTM1-204, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-204ENST00000453046 GNA13Q14344 377 aa16.27■□□□□ 0.2
SQSTM1-204ENST00000453046 FLYWCH1Q4VC44 716 aa16.27■□□□□ 0.2
SQSTM1-204ENST00000453046 RAET1LQ5VY80 246 aa16.27■□□□□ 0.2
SQSTM1-204ENST00000453046 GLYATQ6IB77 296 aa16.27■□□□□ 0.2
SQSTM1-204ENST00000453046 GRAMD2AQ8IUY3 354 aa16.27■□□□□ 0.2
SQSTM1-204ENST00000453046 FAM222BQ8WU58 562 aa16.27■□□□□ 0.2
SQSTM1-204ENST00000453046 FIG4Q92562 907 aa16.27■□□□□ 0.2
SQSTM1-204ENST00000453046 STMN2Q93045 179 aa16.27■□□□□ 0.2
SQSTM1-204ENST00000453046 WNT2BQ93097 391 aa16.27■□□□□ 0.2
SQSTM1-204ENST00000453046 FAM162AQ96A26 154 aa16.27■□□□□ 0.2
SQSTM1-204ENST00000453046 INTS12Q96CB8 462 aaKnown RBP16.27■□□□□ 0.2
SQSTM1-204ENST00000453046 RNF145Q96MT1 663 aa16.27■□□□□ 0.2
SQSTM1-204ENST00000453046 OR7D2Q96RA2 312 aa16.27■□□□□ 0.2
SQSTM1-204ENST00000453046 LMF2Q9BU23 707 aaKnown RBP16.27■□□□□ 0.2
SQSTM1-204ENST00000453046 DUSP22Q9NRW4 184 aa16.27■□□□□ 0.2
SQSTM1-204ENST00000453046 GIN1Q9NXP7 522 aa16.27■□□□□ 0.2
SQSTM1-204ENST00000453046 MED11Q9P086 117 aa16.27■□□□□ 0.2
SQSTM1-204ENST00000453046 ANKHD1Q8IWZ3 2542 aaKnown RBP16.27■□□□□ 0.2
SQSTM1-204ENST00000453046 F8P00451 2351 aa16.27■□□□□ 0.19
SQSTM1-204ENST00000453046 TCRBV3S1A0A5B6 114 aa16.26■□□□□ 0.19
SQSTM1-204ENST00000453046 TUBAL3A6NHL2 446 aa16.26■□□□□ 0.19
SQSTM1-204ENST00000453046 C17orf51A8MQB3 221 aa16.26■□□□□ 0.19
SQSTM1-204ENST00000453046 FADS1O60427 444 aa16.26■□□□□ 0.19
SQSTM1-204ENST00000453046 ENTPD5O75356 428 aa16.26■□□□□ 0.19
SQSTM1-204ENST00000453046 RCBTB2O95199 551 aa16.26■□□□□ 0.19
SQSTM1-204ENST00000453046 IL33O95760 270 aa16.26■□□□□ 0.19
SQSTM1-204ENST00000453046 AK1P00568 194 aa16.26■□□□□ 0.19
SQSTM1-204ENST00000453046 OR12D1P0DN82 309 aa16.26■□□□□ 0.19
SQSTM1-204ENST00000453046 NCK1P16333 377 aa16.26■□□□□ 0.19
SQSTM1-204ENST00000453046 RIPK1Q13546 671 aa16.26■□□□□ 0.19
SQSTM1-204ENST00000453046 ATAD3BQ5T9A4 648 aa16.26■□□□□ 0.19
SQSTM1-204ENST00000453046 PRAMEF8Q5VWM4 474 aa16.26■□□□□ 0.19
SQSTM1-204ENST00000453046 PRAMEF7Q5VXH5 474 aa16.26■□□□□ 0.19
SQSTM1-204ENST00000453046 FBXW10Q5XX13 1052 aa16.26■□□□□ 0.19
SQSTM1-204ENST00000453046 PLXDC2Q6UX71 529 aa16.26■□□□□ 0.19
SQSTM1-204ENST00000453046 CYP2R1Q6VVX0 501 aa16.26■□□□□ 0.19
SQSTM1-204ENST00000453046 P4HA3Q7Z4N8 544 aa16.26■□□□□ 0.19
SQSTM1-204ENST00000453046 SPATA24Q86W54 205 aa16.26■□□□□ 0.19
SQSTM1-204ENST00000453046 UBQLNLQ8IYU4 475 aa16.26■□□□□ 0.19
SQSTM1-204ENST00000453046 GCNT2Q8N0V5 402 aa16.26■□□□□ 0.19
SQSTM1-204ENST00000453046 OR5D16Q8NGK9 328 aa16.26■□□□□ 0.19
SQSTM1-204ENST00000453046 NFKBIDQ8NI38 313 aa16.26■□□□□ 0.19
SQSTM1-204ENST00000453046 GPR151Q8TDV0 419 aa16.26■□□□□ 0.19
SQSTM1-204ENST00000453046 ADAMTS15Q8TE58 950 aa16.26■□□□□ 0.19
SQSTM1-204ENST00000453046 NRGNQ92686 78 aa16.26■□□□□ 0.19
SQSTM1-204ENST00000453046 RAB8BQ92930 207 aa16.26■□□□□ 0.19
SQSTM1-204ENST00000453046 MAL2Q969L2 176 aa16.26■□□□□ 0.19
SQSTM1-204ENST00000453046 C16orf58Q96GQ5 468 aa16.26■□□□□ 0.19
SQSTM1-204ENST00000453046 RSRC1Q96IZ7 334 aaKnown RBP16.26■□□□□ 0.19
SQSTM1-204ENST00000453046 SFXN3Q9BWM7 321 aa16.26■□□□□ 0.19
SQSTM1-204ENST00000453046 TBL1XR1Q9BZK7 514 aa16.26■□□□□ 0.19
SQSTM1-204ENST00000453046 CLEC4MQ9H2X3 399 aaPredicted RBP16.26■□□□□ 0.19
SQSTM1-204ENST00000453046 EXD2Q9NVH0 621 aa16.26■□□□□ 0.19
SQSTM1-204ENST00000453046 FLRT3Q9NZU0 649 aa16.26■□□□□ 0.19
SQSTM1-204ENST00000453046 LIPT1Q9Y234 373 aa16.26■□□□□ 0.19
SQSTM1-204ENST00000453046 KIAA1549Q9HCM3 1950 aa16.26■□□□□ 0.19
SQSTM1-204ENST00000453046 CELSR1Q9NYQ6 3014 aa16.25■□□□□ 0.19
SQSTM1-204ENST00000453046 C5orf58C9J3I9 102 aa16.25■□□□□ 0.19
SQSTM1-204ENST00000453046 MGRN1O60291 552 aa16.25■□□□□ 0.19
SQSTM1-204ENST00000453046 FKBP6O75344 327 aa16.25■□□□□ 0.19
SQSTM1-204ENST00000453046 UTS2O95399 124 aa16.25■□□□□ 0.19
SQSTM1-204ENST00000453046 BCHEP06276 602 aa16.25■□□□□ 0.19
SQSTM1-204ENST00000453046 ALOX5P09917 674 aa16.25■□□□□ 0.19
SQSTM1-204ENST00000453046 ACP2P11117 423 aa16.25■□□□□ 0.19
SQSTM1-204ENST00000453046 PEPDP12955 493 aa16.25■□□□□ 0.19
SQSTM1-204ENST00000453046 ZNF708P17019 499 aa16.25■□□□□ 0.19
SQSTM1-204ENST00000453046 DNAJA1P31689 397 aaKnown RBP16.25■□□□□ 0.19
SQSTM1-204ENST00000453046 MAP3K8P41279 467 aa16.25■□□□□ 0.19
SQSTM1-204ENST00000453046 CLDN18P56856 261 aa16.25■□□□□ 0.19
SQSTM1-204ENST00000453046 PCBP3P57721 371 aaKnown RBP16.25■□□□□ 0.19
SQSTM1-204ENST00000453046 FOXF2Q12947 444 aa16.25■□□□□ 0.19
SQSTM1-204ENST00000453046 GANABQ14697 944 aaKnown RBP16.25■□□□□ 0.19
SQSTM1-204ENST00000453046 TESK1Q15569 626 aa16.25■□□□□ 0.19
SQSTM1-204ENST00000453046 BCL2A1Q16548 175 aa16.25■□□□□ 0.19
SQSTM1-204ENST00000453046 HEPHL1Q6MZM0 1159 aa16.25■□□□□ 0.19
SQSTM1-204ENST00000453046 REEP3Q6NUK4 255 aa16.25■□□□□ 0.19
SQSTM1-204ENST00000453046 ZFP1Q6P2D0 407 aa16.25■□□□□ 0.19
SQSTM1-204ENST00000453046 CCDC80Q76M96 950 aa16.25■□□□□ 0.19
SQSTM1-204ENST00000453046 ADGRE4PQ86SQ3 457 aa16.25■□□□□ 0.19
SQSTM1-204ENST00000453046 LUZP2Q86TE4 346 aa16.25■□□□□ 0.19
SQSTM1-204ENST00000453046 MARCH3Q86UD3 253 aa16.25■□□□□ 0.19
SQSTM1-204ENST00000453046 MEIOBQ8N635 442 aa16.25■□□□□ 0.19
SQSTM1-204ENST00000453046 FADS6Q8N9I5 356 aa16.25■□□□□ 0.19
SQSTM1-204ENST00000453046 OR2M3Q8NG83 312 aa16.25■□□□□ 0.19
SQSTM1-204ENST00000453046 FBXO30Q8TB52 745 aa16.25■□□□□ 0.19
SQSTM1-204ENST00000453046 DUSP19Q8WTR2 217 aa16.25■□□□□ 0.19
SQSTM1-204ENST00000453046 SLC38A5Q8WUX1 472 aa16.25■□□□□ 0.19
SQSTM1-204ENST00000453046 PIK3R3Q92569 461 aa16.25■□□□□ 0.19
SQSTM1-204ENST00000453046 SLC9A6Q92581 669 aa16.25■□□□□ 0.19
SQSTM1-204ENST00000453046 RMND5BQ96G75 393 aaPredicted RBP16.25■□□□□ 0.19
SQSTM1-204ENST00000453046 TMEM19Q96HH6 336 aa16.25■□□□□ 0.19
SQSTM1-204ENST00000453046 UCN2Q96RP3 112 aa16.25■□□□□ 0.19
SQSTM1-204ENST00000453046 RBM24Q9BX46 236 aaKnown RBP16.25■□□□□ 0.19
SQSTM1-204ENST00000453046 PIGUQ9H490 435 aa16.25■□□□□ 0.19
SQSTM1-204ENST00000453046 RASSF1Q9NS23 344 aa16.25■□□□□ 0.19
SQSTM1-204ENST00000453046 CALML5Q9NZT1 146 aa16.25■□□□□ 0.19
SQSTM1-204ENST00000453046 CLCF1Q9UBD9 225 aa16.25■□□□□ 0.19
SQSTM1-204ENST00000453046 TCRBV5S2A0A599 114 aa16.24■□□□□ 0.19
SQSTM1-204ENST00000453046 GXYLT2A0PJZ3 443 aa16.24■□□□□ 0.19
SQSTM1-204ENST00000453046 A6NNC1 897 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms