RNA–Protein interactions for RNA: ENST00000451492.5

USP54-207, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 509 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-207ENST00000451492 ZG16BQ96DA0 208 aa8.65□□□□□ -1.02
USP54-207ENST00000451492 THOC1Q96FV9 657 aaKnown RBP8.65□□□□□ -1.02
USP54-207ENST00000451492 AURKBQ96GD4 344 aaPredicted RBP8.65□□□□□ -1.02
USP54-207ENST00000451492 MAELQ96JY0 434 aaKnown RBP8.65□□□□□ -1.02
USP54-207ENST00000451492 ATP6V1G3Q96LB4 118 aa8.65□□□□□ -1.02
USP54-207ENST00000451492 DACH2Q96NX9 599 aa8.65□□□□□ -1.02
USP54-207ENST00000451492 SLC39A3Q9BRY0 314 aa8.65□□□□□ -1.02
USP54-207ENST00000451492 LAT2Q9GZY6 243 aa8.65□□□□□ -1.02
USP54-207ENST00000451492 SLCO1B3Q9NPD5 702 aa8.65□□□□□ -1.02
USP54-207ENST00000451492 TIGARQ9NQ88 270 aa8.65□□□□□ -1.02
USP54-207ENST00000451492 A0A1W2PPR1 153 aa8.64□□□□□ -1.03
USP54-207ENST00000451492 FAM221AA4D161 298 aa8.64□□□□□ -1.03
USP54-207ENST00000451492 C16orf97H3BN30 126 aa8.64□□□□□ -1.03
USP54-207ENST00000451492 AP3D1O14617 1153 aa8.64□□□□□ -1.03
USP54-207ENST00000451492 ADAMDEC1O15204 470 aa8.64□□□□□ -1.03
USP54-207ENST00000451492 POLR3GO15318 223 aaPredicted RBP8.64□□□□□ -1.03
USP54-207ENST00000451492 SIAH2O43255 324 aa8.64□□□□□ -1.03
USP54-207ENST00000451492 RAF1P04049 648 aa8.64□□□□□ -1.03
USP54-207ENST00000451492 BCHEP06276 602 aa8.64□□□□□ -1.03
USP54-207ENST00000451492 NR2F1P10589 423 aa8.64□□□□□ -1.03
USP54-207ENST00000451492 ETFAP13804 333 aa8.64□□□□□ -1.03
USP54-207ENST00000451492 ENPP1P22413 925 aa8.64□□□□□ -1.03
USP54-207ENST00000451492 PGM1P36871 562 aa8.64□□□□□ -1.03
USP54-207ENST00000451492 POLR2JP52435 117 aaKnown RBP8.64□□□□□ -1.03
USP54-207ENST00000451492 SLC18A1P54219 525 aa8.64□□□□□ -1.03
USP54-207ENST00000451492 SESN3P58005 492 aa8.64□□□□□ -1.03
USP54-207ENST00000451492 STX1BP61266 288 aa8.64□□□□□ -1.03
USP54-207ENST00000451492 DAZAP2Q15038 168 aaPredicted RBP8.64□□□□□ -1.03
USP54-207ENST00000451492 TESK1Q15569 626 aa8.64□□□□□ -1.03
USP54-207ENST00000451492 TSC22D1Q15714 1073 aa8.64□□□□□ -1.03
USP54-207ENST00000451492 GSTA3Q16772 222 aa8.64□□□□□ -1.03
USP54-207ENST00000451492 RPS26P11Q5JNZ5 115 aaPredicted RBP8.64□□□□□ -1.03
USP54-207ENST00000451492 TMEM201Q5SNT2 666 aa8.64□□□□□ -1.03
USP54-207ENST00000451492 SLC2A7Q6PXP3 512 aa8.64□□□□□ -1.03
USP54-207ENST00000451492 NUFIP2Q7Z417 695 aaKnown RBP8.64□□□□□ -1.03
USP54-207ENST00000451492 MIER2Q8N344 545 aa8.64□□□□□ -1.03
USP54-207ENST00000451492 ARFGAP2Q8N6H7 521 aa8.64□□□□□ -1.03
USP54-207ENST00000451492 MRGPRX4Q96LA9 322 aa8.64□□□□□ -1.03
USP54-207ENST00000451492 EBF4Q9BQW3 602 aa8.64□□□□□ -1.03
USP54-207ENST00000451492 SLC38A1Q9H2H9 487 aa8.64□□□□□ -1.03
USP54-207ENST00000451492 UBTD1Q9HAC8 227 aa8.64□□□□□ -1.03
USP54-207ENST00000451492 CTPS2Q9NRF8 586 aa8.64□□□□□ -1.03
USP54-207ENST00000451492 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.64□□□□□ -1.03
USP54-207ENST00000451492 ELOVL5Q9NYP7 299 aa8.64□□□□□ -1.03
USP54-207ENST00000451492 ZNF226Q9NYT6 803 aa8.64□□□□□ -1.03
USP54-207ENST00000451492 SLC35A3Q9Y2D2 325 aa8.64□□□□□ -1.03
USP54-207ENST00000451492 RAI1Q7Z5J4 1906 aaPredicted RBP8.64□□□□□ -1.03
USP54-207ENST00000451492 MED13LQ71F56 2210 aa8.64□□□□□ -1.03
USP54-207ENST00000451492 FREM1Q5H8C1 2179 aa8.63□□□□□ -1.03
USP54-207ENST00000451492 NR5A2O00482 541 aa8.63□□□□□ -1.03
USP54-207ENST00000451492 KLF11O14901 512 aa8.63□□□□□ -1.03
USP54-207ENST00000451492 KRT75O95678 551 aa8.63□□□□□ -1.03
USP54-207ENST00000451492 IL6P05231 212 aa8.63□□□□□ -1.03
USP54-207ENST00000451492 FESP07332 822 aa8.63□□□□□ -1.03
USP54-207ENST00000451492 CD1EP15812 388 aa8.63□□□□□ -1.03
USP54-207ENST00000451492 IL7RP16871 459 aa8.63□□□□□ -1.03
USP54-207ENST00000451492 ADH6P28332 368 aa8.63□□□□□ -1.03
USP54-207ENST00000451492 IDH2P48735 452 aaKnown RBP8.63□□□□□ -1.03
USP54-207ENST00000451492 ANXA11P50995 505 aaKnown RBP8.63□□□□□ -1.03
USP54-207ENST00000451492 DSTNP60981 165 aa8.63□□□□□ -1.03
USP54-207ENST00000451492 KCNJ10P78508 379 aa8.63□□□□□ -1.03
USP54-207ENST00000451492 PLAURQ03405 335 aa8.63□□□□□ -1.03
USP54-207ENST00000451492 SYT14P1Q58G82 188 aa8.63□□□□□ -1.03
USP54-207ENST00000451492 GTF2IRD2BQ6EKJ0 949 aa8.63□□□□□ -1.03
USP54-207ENST00000451492 C22orf34Q6ZV56 151 aa8.63□□□□□ -1.03
USP54-207ENST00000451492 PLEKHM3Q6ZWE6 761 aa8.63□□□□□ -1.03
USP54-207ENST00000451492 GTF2IRD2Q86UP8 949 aa8.63□□□□□ -1.03
USP54-207ENST00000451492 STK32CQ86UX6 486 aa8.63□□□□□ -1.03
USP54-207ENST00000451492 CXorf67Q86X51 503 aaPredicted RBP8.63□□□□□ -1.03
USP54-207ENST00000451492 VRK2Q86Y07 508 aa8.63□□□□□ -1.03
USP54-207ENST00000451492 WFDC8Q8IUA0 241 aa8.63□□□□□ -1.03
USP54-207ENST00000451492 GLB1L3Q8NCI6 653 aaPredicted RBP8.63□□□□□ -1.03
USP54-207ENST00000451492 TMEM234Q8WY98 164 aa8.63□□□□□ -1.03
USP54-207ENST00000451492 ST8SIA1Q92185 356 aa8.63□□□□□ -1.03
USP54-207ENST00000451492 CNOT9Q92600 299 aaKnown RBP8.63□□□□□ -1.03
USP54-207ENST00000451492 NINJ1Q92982 152 aa8.63□□□□□ -1.03
USP54-207ENST00000451492 HS3ST6Q96QI5 342 aa8.63□□□□□ -1.03
USP54-207ENST00000451492 ZNF300Q96RE9 604 aaPredicted RBP8.63□□□□□ -1.03
USP54-207ENST00000451492 OR11A1Q9GZK7 315 aa8.63□□□□□ -1.03
USP54-207ENST00000451492 RMND5AQ9H871 391 aa8.63□□□□□ -1.03
USP54-207ENST00000451492 PLEKHF2Q9H8W4 249 aa8.63□□□□□ -1.03
USP54-207ENST00000451492 TCF7L2Q9NQB0 619 aa8.63□□□□□ -1.03
USP54-207ENST00000451492 POLE3Q9NRF9 147 aa8.63□□□□□ -1.03
USP54-207ENST00000451492 SERINC1Q9NRX5 453 aa8.63□□□□□ -1.03
USP54-207ENST00000451492 ARGLU1Q9NWB6 273 aaPredicted RBP8.63□□□□□ -1.03
USP54-207ENST00000451492 ZIM2Q9NZV7 527 aa8.63□□□□□ -1.03
USP54-207ENST00000451492 KLHL13Q9P2N7 655 aa8.63□□□□□ -1.03
USP54-207ENST00000451492 P2RX2Q9UBL9 471 aa8.63□□□□□ -1.03
USP54-207ENST00000451492 CCDC168Q8NDH2 2452 aa8.62□□□□□ -1.03
USP54-207ENST00000451492 DEFB108AA8MXU0 73 aa8.62□□□□□ -1.03
USP54-207ENST00000451492 SULT2B1O00204 365 aa8.62□□□□□ -1.03
USP54-207ENST00000451492 SMAD9O15198 467 aaKnown RBP8.62□□□□□ -1.03
USP54-207ENST00000451492 ADAM11O75078 769 aa8.62□□□□□ -1.03
USP54-207ENST00000451492 PRKD3O94806 890 aa8.62□□□□□ -1.03
USP54-207ENST00000451492 ATE1O95260 518 aa8.62□□□□□ -1.03
USP54-207ENST00000451492 PABPC4LP0CB38 370 aaKnown RBP8.62□□□□□ -1.03
USP54-207ENST00000451492 GKN3PP0CG01 181 aa8.62□□□□□ -1.03
USP54-207ENST00000451492 CRYGSP22914 178 aa8.62□□□□□ -1.03
USP54-207ENST00000451492 DIO1P49895 249 aa8.62□□□□□ -1.03
USP54-207ENST00000451492 AQP5P55064 265 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms