RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 ZNF443Q9Y2A4 671 aaPredicted RBP13.31□□□□□ -0.28
HDAC4-204ENST00000446876 ZNF175Q9Y473 711 aa13.31□□□□□ -0.28
HDAC4-204ENST00000446876 ADGRG4Q8IZF6 3080 aa13.31□□□□□ -0.28
HDAC4-204ENST00000446876 CENPEQ02224 2701 aa13.3□□□□□ -0.28
HDAC4-204ENST00000446876 A0A1W2PNR3 127 aa13.3□□□□□ -0.28
HDAC4-204ENST00000446876 TMEM247A6NEH6 219 aa13.3□□□□□ -0.28
HDAC4-204ENST00000446876 ETV2O00321 342 aaPredicted RBP13.3□□□□□ -0.28
HDAC4-204ENST00000446876 FBP2O00757 339 aa13.3□□□□□ -0.28
HDAC4-204ENST00000446876 ADAMDEC1O15204 470 aa13.3□□□□□ -0.28
HDAC4-204ENST00000446876 TNFSF13O75888 250 aa13.3□□□□□ -0.28
HDAC4-204ENST00000446876 IL18BPO95998 194 aa13.3□□□□□ -0.28
HDAC4-204ENST00000446876 ARAFP10398 606 aa13.3□□□□□ -0.28
HDAC4-204ENST00000446876 MTPNP58546 118 aa13.3□□□□□ -0.28
HDAC4-204ENST00000446876 MERTKQ12866 999 aa13.3□□□□□ -0.28
HDAC4-204ENST00000446876 KLF10Q13118 480 aa13.3□□□□□ -0.28
HDAC4-204ENST00000446876 SELENBP1Q13228 472 aa13.3□□□□□ -0.28
HDAC4-204ENST00000446876 NFYCQ13952 458 aa13.3□□□□□ -0.28
HDAC4-204ENST00000446876 CAPRIN1Q14444 709 aaKnown RBP13.3□□□□□ -0.28
HDAC4-204ENST00000446876 RUNDC3AQ59EK9 446 aa13.3□□□□□ -0.28
HDAC4-204ENST00000446876 VWA1Q6PCB0 445 aa13.3□□□□□ -0.28
HDAC4-204ENST00000446876 PLEKHM3Q6ZWE6 761 aa13.3□□□□□ -0.28
HDAC4-204ENST00000446876 LUZP2Q86TE4 346 aa13.3□□□□□ -0.28
HDAC4-204ENST00000446876 ZNF295-AS1Q8N0V1 137 aa13.3□□□□□ -0.28
HDAC4-204ENST00000446876 DPP10Q8N608 796 aa13.3□□□□□ -0.28
HDAC4-204ENST00000446876 ST8SIA1Q92185 356 aa13.3□□□□□ -0.28
HDAC4-204ENST00000446876 OSTF1Q92882 214 aa13.3□□□□□ -0.28
HDAC4-204ENST00000446876 DNAJA3Q96EY1 480 aa13.3□□□□□ -0.28
HDAC4-204ENST00000446876 ZFP3Q96NJ6 502 aa13.3□□□□□ -0.28
HDAC4-204ENST00000446876 PRRG4Q9BZD6 226 aa13.3□□□□□ -0.28
HDAC4-204ENST00000446876 RNF122Q9H9V4 155 aa13.3□□□□□ -0.28
HDAC4-204ENST00000446876 EXOSC3Q9NQT5 275 aaKnown RBP13.3□□□□□ -0.28
HDAC4-204ENST00000446876 ACER3Q9NUN7 267 aa13.3□□□□□ -0.28
HDAC4-204ENST00000446876 THUMPD1Q9NXG2 353 aaKnown RBP13.3□□□□□ -0.28
HDAC4-204ENST00000446876 CLEC4AQ9UMR7 237 aa13.3□□□□□ -0.28
HDAC4-204ENST00000446876 CHST2Q9Y4C5 530 aa13.3□□□□□ -0.28
HDAC4-204ENST00000446876 A0A0G2JPF8 293 aa13.29□□□□□ -0.28
HDAC4-204ENST00000446876 HNRNPCL2B2RXH8 293 aa13.29□□□□□ -0.28
HDAC4-204ENST00000446876 HNRNPCL3B7ZW38 293 aa13.29□□□□□ -0.28
HDAC4-204ENST00000446876 C5orf58C9J3I9 102 aa13.29□□□□□ -0.28
HDAC4-204ENST00000446876 HNRNPCL1O60812 293 aaKnown RBP13.29□□□□□ -0.28
HDAC4-204ENST00000446876 SYNGR4O95473 234 aa13.29□□□□□ -0.28
HDAC4-204ENST00000446876 GKN3PP0CG01 181 aa13.29□□□□□ -0.28
HDAC4-204ENST00000446876 HNRNPCL4P0DMR1 293 aa13.29□□□□□ -0.28
HDAC4-204ENST00000446876 PPIBP23284 216 aaKnown RBP13.29□□□□□ -0.28
HDAC4-204ENST00000446876 IDH2P48735 452 aaKnown RBP13.29□□□□□ -0.28
HDAC4-204ENST00000446876 GYS2P54840 703 aa13.29□□□□□ -0.28
HDAC4-204ENST00000446876 EEF1A1P68104 462 aaKnown RBP13.29□□□□□ -0.28
HDAC4-204ENST00000446876 LIN52Q52LA3 116 aa13.29□□□□□ -0.28
HDAC4-204ENST00000446876 DMRTC2Q8IXT2 367 aaPredicted RBP13.29□□□□□ -0.28
HDAC4-204ENST00000446876 CMIPQ8IY22 773 aa13.29□□□□□ -0.28
HDAC4-204ENST00000446876 CLIP4Q8N3C7 705 aa13.29□□□□□ -0.28
HDAC4-204ENST00000446876 TMEM234Q8WY98 164 aa13.29□□□□□ -0.28
HDAC4-204ENST00000446876 ROBO4Q8WZ75 1007 aa13.29□□□□□ -0.28
HDAC4-204ENST00000446876 CGREF1Q99674 301 aa13.29□□□□□ -0.28
HDAC4-204ENST00000446876 SLC39A3Q9BRY0 314 aa13.29□□□□□ -0.28
HDAC4-204ENST00000446876 RSPO3Q9BXY4 272 aaPredicted RBP13.29□□□□□ -0.28
HDAC4-204ENST00000446876 CTPS2Q9NRF8 586 aa13.29□□□□□ -0.28
HDAC4-204ENST00000446876 JKAMPQ9P055 326 aa13.29□□□□□ -0.28
HDAC4-204ENST00000446876 ARMCX1Q9P291 453 aa13.29□□□□□ -0.28
HDAC4-204ENST00000446876 MCTS1Q9ULC4 181 aaKnown RBP13.29□□□□□ -0.28
HDAC4-204ENST00000446876 GMEB1Q9Y692 573 aa13.29□□□□□ -0.28
HDAC4-204ENST00000446876 IGHV3-15A0A0B4J1V0 119 aa13.28□□□□□ -0.28
HDAC4-204ENST00000446876 CDHR4A6H8M9 788 aa13.28□□□□□ -0.28
HDAC4-204ENST00000446876 EVPLLA8MZ36 301 aa13.28□□□□□ -0.28
HDAC4-204ENST00000446876 SYT5O00445 386 aa13.28□□□□□ -0.28
HDAC4-204ENST00000446876 FRS3O43559 492 aa13.28□□□□□ -0.28
HDAC4-204ENST00000446876 SMNDC1O75940 238 aaKnown RBP eCLIP13.28□□□□□ -0.28
HDAC4-204ENST00000446876 PGM3O95394 542 aa13.28□□□□□ -0.28
HDAC4-204ENST00000446876 PRG2P13727 222 aa13.28□□□□□ -0.28
HDAC4-204ENST00000446876 GPX2P18283 190 aa13.28□□□□□ -0.28
HDAC4-204ENST00000446876 KLK2P20151 261 aa13.28□□□□□ -0.28
HDAC4-204ENST00000446876 CCNA2P20248 432 aa13.28□□□□□ -0.28
HDAC4-204ENST00000446876 SLC7A1P30825 629 aa13.28□□□□□ -0.28
HDAC4-204ENST00000446876 KIR2DL2P43627 348 aaPredicted RBP13.28□□□□□ -0.28
HDAC4-204ENST00000446876 SEC24CP53992 1094 aa13.28□□□□□ -0.28
HDAC4-204ENST00000446876 CARD18P57730 90 aa13.28□□□□□ -0.28
HDAC4-204ENST00000446876 CDK6Q00534 326 aa13.28□□□□□ -0.28
HDAC4-204ENST00000446876 EPS8Q12929 822 aa13.28□□□□□ -0.28
HDAC4-204ENST00000446876 GNA13Q14344 377 aa13.28□□□□□ -0.28
HDAC4-204ENST00000446876 ZNF239Q16600 458 aaKnown RBP13.28□□□□□ -0.28
HDAC4-204ENST00000446876 FBXL19-AS1Q494R0 122 aa13.28□□□□□ -0.28
HDAC4-204ENST00000446876 PDSS1Q5T2R2 415 aa13.28□□□□□ -0.28
HDAC4-204ENST00000446876 OR2A2Q6IF42 318 aa13.28□□□□□ -0.28
HDAC4-204ENST00000446876 C3orf33Q6P1S2 294 aa13.28□□□□□ -0.28
HDAC4-204ENST00000446876 BTLAQ7Z6A9 289 aa13.28□□□□□ -0.28
HDAC4-204ENST00000446876 SNX32Q86XE0 403 aa13.28□□□□□ -0.28
HDAC4-204ENST00000446876 BBS10Q8TAM1 723 aa13.28□□□□□ -0.28
HDAC4-204ENST00000446876 TSPEARQ8WU66 669 aa13.28□□□□□ -0.28
HDAC4-204ENST00000446876 PMM1Q92871 262 aa13.28□□□□□ -0.28
HDAC4-204ENST00000446876 RNASE6Q93091 150 aaKnown RBP13.28□□□□□ -0.28
HDAC4-204ENST00000446876 STARD4Q96DR4 205 aa13.28□□□□□ -0.28
HDAC4-204ENST00000446876 ANKRD27Q96NW4 1050 aa13.28□□□□□ -0.28
HDAC4-204ENST00000446876 OR5B2Q96R09 309 aa13.28□□□□□ -0.28
HDAC4-204ENST00000446876 CCDC106Q9BWC9 280 aa13.28□□□□□ -0.28
HDAC4-204ENST00000446876 OPN3Q9H1Y3 402 aaPredicted RBP13.28□□□□□ -0.28
HDAC4-204ENST00000446876 BCL2L10Q9HD36 194 aa13.28□□□□□ -0.28
HDAC4-204ENST00000446876 PACSIN3Q9UKS6 424 aa13.28□□□□□ -0.28
HDAC4-204ENST00000446876 MPDZO75970 2070 aa13.28□□□□□ -0.28
HDAC4-204ENST00000446876 CFAP73A6NFT4 308 aa13.27□□□□□ -0.29
HDAC4-204ENST00000446876 GJE1A6NN92 205 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms