RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 EIF4E2O60573 245 aaKnown RBP9.69□□□□□ -0.86
SF3A1-203ENST00000444440 DIAPH2O60879 1101 aa9.69□□□□□ -0.86
SF3A1-203ENST00000444440 CYP7B1O75881 506 aa9.69□□□□□ -0.86
SF3A1-203ENST00000444440 AK1P00568 194 aa9.69□□□□□ -0.86
SF3A1-203ENST00000444440 CSTAP01040 98 aa9.69□□□□□ -0.86
SF3A1-203ENST00000444440 CHRM4P08173 479 aa9.69□□□□□ -0.86
SF3A1-203ENST00000444440 CD1EP15812 388 aa9.69□□□□□ -0.86
SF3A1-203ENST00000444440 CD53P19397 219 aa9.69□□□□□ -0.86
SF3A1-203ENST00000444440 ENPP1P22413 925 aa9.69□□□□□ -0.86
SF3A1-203ENST00000444440 CRYGSP22914 178 aa9.69□□□□□ -0.86
SF3A1-203ENST00000444440 ME2P23368 584 aa9.69□□□□□ -0.86
SF3A1-203ENST00000444440 ADH6P28332 368 aa9.69□□□□□ -0.86
SF3A1-203ENST00000444440 CHI3L1P36222 383 aaPredicted RBP9.69□□□□□ -0.86
SF3A1-203ENST00000444440 EIF1P41567 113 aaKnown RBP9.69□□□□□ -0.86
SF3A1-203ENST00000444440 KCNJ5P48544 419 aa9.69□□□□□ -0.86
SF3A1-203ENST00000444440 PCYT1AP49585 367 aa9.69□□□□□ -0.86
SF3A1-203ENST00000444440 KHKP50053 298 aa9.69□□□□□ -0.86
SF3A1-203ENST00000444440 MVDP53602 400 aa9.69□□□□□ -0.86
SF3A1-203ENST00000444440 CARD18P57730 90 aa9.69□□□□□ -0.86
SF3A1-203ENST00000444440 SESN3P58005 492 aa9.69□□□□□ -0.86
SF3A1-203ENST00000444440 CHRNEQ04844 493 aa9.69□□□□□ -0.86
SF3A1-203ENST00000444440 TSC22D1Q15714 1073 aa9.69□□□□□ -0.86
SF3A1-203ENST00000444440 GTDC1Q4AE62 458 aa9.69□□□□□ -0.86
SF3A1-203ENST00000444440 TIGD2Q4W5G0 525 aa9.69□□□□□ -0.86
SF3A1-203ENST00000444440 FBXW10Q5XX13 1052 aa9.69□□□□□ -0.86
SF3A1-203ENST00000444440 DNAJC14Q6Y2X3 702 aaPredicted RBP9.69□□□□□ -0.86
SF3A1-203ENST00000444440 TUSC5Q8IXB3 177 aa9.69□□□□□ -0.86
SF3A1-203ENST00000444440 ZNF619Q8N2I2 560 aa9.69□□□□□ -0.86
SF3A1-203ENST00000444440 GLB1L3Q8NCI6 653 aaPredicted RBP9.69□□□□□ -0.86
SF3A1-203ENST00000444440 MRGPRX4Q96LA9 322 aa9.69□□□□□ -0.86
SF3A1-203ENST00000444440 OR52E6Q96RD3 313 aa9.69□□□□□ -0.86
SF3A1-203ENST00000444440 KLHL4Q9C0H6 718 aa9.69□□□□□ -0.86
SF3A1-203ENST00000444440 SLC38A1Q9H2H9 487 aa9.69□□□□□ -0.86
SF3A1-203ENST00000444440 ELOVL5Q9NYP7 299 aa9.69□□□□□ -0.86
SF3A1-203ENST00000444440 NDRG3Q9UGV2 375 aa9.69□□□□□ -0.86
SF3A1-203ENST00000444440 MCTS1Q9ULC4 181 aaKnown RBP9.69□□□□□ -0.86
SF3A1-203ENST00000444440 EMC9Q9Y3B6 208 aa9.69□□□□□ -0.86
SF3A1-203ENST00000444440 WDR45Q9Y484 360 aa9.69□□□□□ -0.86
SF3A1-203ENST00000444440 USH1CQ9Y6N9 552 aa9.69□□□□□ -0.86
SF3A1-203ENST00000444440 C16orf97H3BN30 126 aa9.68□□□□□ -0.86
SF3A1-203ENST00000444440 H3BNH8 94 aa9.68□□□□□ -0.86
SF3A1-203ENST00000444440 AP3D1O14617 1153 aa9.68□□□□□ -0.86
SF3A1-203ENST00000444440 SMAD9O15198 467 aaKnown RBP9.68□□□□□ -0.86
SF3A1-203ENST00000444440 SLC22A3O75751 556 aa9.68□□□□□ -0.86
SF3A1-203ENST00000444440 SYNGR4O95473 234 aa9.68□□□□□ -0.86
SF3A1-203ENST00000444440 AGR2O95994 175 aa9.68□□□□□ -0.86
SF3A1-203ENST00000444440 PLGP00747 810 aaPredicted RBP9.68□□□□□ -0.86
SF3A1-203ENST00000444440 RAF1P04049 648 aa9.68□□□□□ -0.86
SF3A1-203ENST00000444440 IL6P05231 212 aa9.68□□□□□ -0.86
SF3A1-203ENST00000444440 RPS4Y1P22090 263 aaKnown RBP9.68□□□□□ -0.86
SF3A1-203ENST00000444440 DNASE1P24855 282 aa9.68□□□□□ -0.86
SF3A1-203ENST00000444440 SELENBP1Q13228 472 aa9.68□□□□□ -0.86
SF3A1-203ENST00000444440 CBFBQ13951 182 aa9.68□□□□□ -0.86
SF3A1-203ENST00000444440 PDCD4Q53EL6 469 aaKnown RBP9.68□□□□□ -0.86
SF3A1-203ENST00000444440 GPAT3Q53EU6 434 aa9.68□□□□□ -0.86
SF3A1-203ENST00000444440 EPGNQ6UW88 154 aa9.68□□□□□ -0.86
SF3A1-203ENST00000444440 PLEKHM3Q6ZWE6 761 aa9.68□□□□□ -0.86
SF3A1-203ENST00000444440 TRIML2Q8N7C3 387 aa9.68□□□□□ -0.86
SF3A1-203ENST00000444440 TOR1AIP2Q8NFQ8 470 aa9.68□□□□□ -0.86
SF3A1-203ENST00000444440 CNOT9Q92600 299 aaKnown RBP9.68□□□□□ -0.86
SF3A1-203ENST00000444440 CPNE4Q96A23 557 aaPredicted RBP9.68□□□□□ -0.86
SF3A1-203ENST00000444440 MBD6Q96DN6 1003 aa9.68□□□□□ -0.86
SF3A1-203ENST00000444440 PIK3IP1Q96FE7 263 aa9.68□□□□□ -0.86
SF3A1-203ENST00000444440 MAGEB18Q96M61 343 aa9.68□□□□□ -0.86
SF3A1-203ENST00000444440 PANX1Q96RD7 426 aa9.68□□□□□ -0.86
SF3A1-203ENST00000444440 ZNF300Q96RE9 604 aaPredicted RBP9.68□□□□□ -0.86
SF3A1-203ENST00000444440 MED18Q9BUE0 208 aa9.68□□□□□ -0.86
SF3A1-203ENST00000444440 TMUB1Q9BVT8 246 aa9.68□□□□□ -0.86
SF3A1-203ENST00000444440 SLCO1B3Q9NPD5 702 aa9.68□□□□□ -0.86
SF3A1-203ENST00000444440 EXD2Q9NVH0 621 aa9.68□□□□□ -0.86
SF3A1-203ENST00000444440 PAQR5Q9NXK6 330 aaPredicted RBP9.68□□□□□ -0.86
SF3A1-203ENST00000444440 STOML1Q9UBI4 398 aa9.68□□□□□ -0.86
SF3A1-203ENST00000444440 CR1P17927 2039 aa9.68□□□□□ -0.86
SF3A1-203ENST00000444440 C2CD3Q4AC94 2353 aa9.67□□□□□ -0.86
SF3A1-203ENST00000444440 ZNF814B7Z6K7 855 aa9.67□□□□□ -0.86
SF3A1-203ENST00000444440 POLR3GO15318 223 aaPredicted RBP9.67□□□□□ -0.86
SF3A1-203ENST00000444440 KLF4O43474 513 aa9.67□□□□□ -0.86
SF3A1-203ENST00000444440 GCM2O75603 506 aaPredicted RBP9.67□□□□□ -0.86
SF3A1-203ENST00000444440 GOSR1O95249 250 aa9.67□□□□□ -0.86
SF3A1-203ENST00000444440 PLAUP00749 431 aa9.67□□□□□ -0.86
SF3A1-203ENST00000444440 GUSBP08236 651 aa9.67□□□□□ -0.86
SF3A1-203ENST00000444440 HOXB9P17482 250 aaPredicted RBP9.67□□□□□ -0.86
SF3A1-203ENST00000444440 RYKP34925 604 aa9.67□□□□□ -0.86
SF3A1-203ENST00000444440 ANXA11P50995 505 aaKnown RBP9.67□□□□□ -0.86
SF3A1-203ENST00000444440 CTBP2P56545 445 aa9.67□□□□□ -0.86
SF3A1-203ENST00000444440 STX1BP61266 288 aa9.67□□□□□ -0.86
SF3A1-203ENST00000444440 ADAM8P78325 824 aa9.67□□□□□ -0.86
SF3A1-203ENST00000444440 FOXD4Q12950 439 aaPredicted RBP9.67□□□□□ -0.86
SF3A1-203ENST00000444440 DEFB113Q30KQ7 82 aa9.67□□□□□ -0.86
SF3A1-203ENST00000444440 HSP90B2PQ58FF3 399 aa9.67□□□□□ -0.86
SF3A1-203ENST00000444440 ATAD3BQ5T9A4 648 aa9.67□□□□□ -0.86
SF3A1-203ENST00000444440 C3orf33Q6P1S2 294 aa9.67□□□□□ -0.86
SF3A1-203ENST00000444440 TFAP2EQ6VUC0 442 aa9.67□□□□□ -0.86
SF3A1-203ENST00000444440 ZNF621Q6ZSS3 439 aa9.67□□□□□ -0.86
SF3A1-203ENST00000444440 FCRLAQ7L513 359 aa9.67□□□□□ -0.86
SF3A1-203ENST00000444440 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.67□□□□□ -0.86
SF3A1-203ENST00000444440 ATG4DQ86TL0 474 aaPredicted RBP9.67□□□□□ -0.86
SF3A1-203ENST00000444440 CXorf67Q86X51 503 aaPredicted RBP9.67□□□□□ -0.86
SF3A1-203ENST00000444440 TGIF2LYQ8IUE0 185 aa9.67□□□□□ -0.86
SF3A1-203ENST00000444440 MIER2Q8N344 545 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms