RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 CREBBPQ92793 2442 aa4.68□□□□□ -1.66
HERC1-201ENST00000443617 PRAMEF25A6NGN4 478 aa4.68□□□□□ -1.66
HERC1-201ENST00000443617 GGT3PA6NGU5 568 aa4.68□□□□□ -1.66
HERC1-201ENST00000443617 POP4O95707 220 aaKnown RBP4.68□□□□□ -1.66
HERC1-201ENST00000443617 SRMP19623 302 aa4.68□□□□□ -1.66
HERC1-201ENST00000443617 AKR1C2P52895 323 aa4.68□□□□□ -1.66
HERC1-201ENST00000443617 EEF1A1P68104 462 aaKnown RBP4.68□□□□□ -1.66
HERC1-201ENST00000443617 AKR1C1Q04828 323 aa4.68□□□□□ -1.66
HERC1-201ENST00000443617 KRBOX4Q5JUW0 171 aa4.68□□□□□ -1.66
HERC1-201ENST00000443617 IER5LQ5T953 404 aa4.68□□□□□ -1.66
HERC1-201ENST00000443617 EEF1A1P5Q5VTE0 462 aa4.68□□□□□ -1.66
HERC1-201ENST00000443617 ZNF707Q96C28 371 aaPredicted RBP4.68□□□□□ -1.66
HERC1-201ENST00000443617 ZNF354BQ96LW1 612 aa4.68□□□□□ -1.66
HERC1-201ENST00000443617 RSPH9Q9H1X1 276 aaPredicted RBP4.68□□□□□ -1.66
HERC1-201ENST00000443617 ATG5Q9H1Y0 275 aa4.68□□□□□ -1.66
HERC1-201ENST00000443617 OPN4Q9UHM6 478 aa4.68□□□□□ -1.66
HERC1-201ENST00000443617 GXYLT2A0PJZ3 443 aa4.68□□□□□ -1.66
HERC1-201ENST00000443617 TMEM229AB2RXF0 380 aa4.68□□□□□ -1.66
HERC1-201ENST00000443617 H0YIV9 168 aa4.68□□□□□ -1.66
HERC1-201ENST00000443617 GP1BAP07359 652 aa4.68□□□□□ -1.66
HERC1-201ENST00000443617 TYRP1P17643 537 aa4.68□□□□□ -1.66
HERC1-201ENST00000443617 HOXD9P28356 352 aaPredicted RBP4.68□□□□□ -1.66
HERC1-201ENST00000443617 BTCP35070 178 aa4.68□□□□□ -1.66
HERC1-201ENST00000443617 CHAF1BQ13112 559 aa4.68□□□□□ -1.66
HERC1-201ENST00000443617 RBM39Q14498 530 aaKnown RBP4.68□□□□□ -1.66
HERC1-201ENST00000443617 PLEKHS1Q5SXH7 462 aa4.68□□□□□ -1.66
HERC1-201ENST00000443617 SYNPRQ8TBG9 265 aa4.68□□□□□ -1.66
HERC1-201ENST00000443617 TRIM43Q96BQ3 446 aaPredicted RBP4.68□□□□□ -1.66
HERC1-201ENST00000443617 ORAI1Q96D31 301 aa4.68□□□□□ -1.66
HERC1-201ENST00000443617 SLC6A18Q96N87 628 aa4.68□□□□□ -1.66
HERC1-201ENST00000443617 OPA3Q9H6K4 179 aa4.68□□□□□ -1.66
HERC1-201ENST00000443617 MRPS18AQ9NVS2 196 aaKnown RBP4.68□□□□□ -1.66
HERC1-201ENST00000443617 CKLFQ9UBR5 152 aa4.68□□□□□ -1.66
HERC1-201ENST00000443617 ANKRD36CQ5JPF3 1778 aa4.68□□□□□ -1.66
HERC1-201ENST00000443617 ADM5C9JUS6 153 aa4.68□□□□□ -1.66
HERC1-201ENST00000443617 CPN1P15169 458 aa4.68□□□□□ -1.66
HERC1-201ENST00000443617 JAZF1Q86VZ6 243 aa4.68□□□□□ -1.66
HERC1-201ENST00000443617 NXPE3Q969Y0 559 aa4.68□□□□□ -1.66
HERC1-201ENST00000443617 CD180Q99467 661 aa4.68□□□□□ -1.66
HERC1-201ENST00000443617 APMAPQ9HDC9 416 aa4.68□□□□□ -1.66
HERC1-201ENST00000443617 IL20RAQ9UHF4 553 aa4.68□□□□□ -1.66
HERC1-201ENST00000443617 SIRT4Q9Y6E7 314 aaPredicted RBP4.68□□□□□ -1.66
HERC1-201ENST00000443617 SPTA1P02549 2419 aa4.68□□□□□ -1.66
HERC1-201ENST00000443617 HOXB9P17482 250 aaPredicted RBP4.68□□□□□ -1.66
HERC1-201ENST00000443617 MAPK3P27361 379 aaPredicted RBP4.68□□□□□ -1.66
HERC1-201ENST00000443617 DLSTP36957 453 aa4.68□□□□□ -1.66
HERC1-201ENST00000443617 ALKBH1Q13686 389 aaKnown RBP4.68□□□□□ -1.66
HERC1-201ENST00000443617 C9orf64Q5T6V5 341 aa4.68□□□□□ -1.66
HERC1-201ENST00000443617 TECPR1Q7Z6L1 1165 aa4.68□□□□□ -1.66
HERC1-201ENST00000443617 SEMA4CQ9C0C4 833 aa4.68□□□□□ -1.66
HERC1-201ENST00000443617 OR2AG2A6NM03 316 aa4.68□□□□□ -1.66
HERC1-201ENST00000443617 ZNF432O94892 652 aa4.68□□□□□ -1.66
HERC1-201ENST00000443617 LIM2P55344 173 aa4.68□□□□□ -1.66
HERC1-201ENST00000443617 ACTC1P68032 377 aa4.68□□□□□ -1.66
HERC1-201ENST00000443617 ACTA1P68133 377 aa4.68□□□□□ -1.66
HERC1-201ENST00000443617 MRPS10P82664 201 aaKnown RBP4.68□□□□□ -1.66
HERC1-201ENST00000443617 NXPE4Q6UWF7 544 aa4.68□□□□□ -1.66
HERC1-201ENST00000443617 KCTD9Q7L273 389 aa4.68□□□□□ -1.66
HERC1-201ENST00000443617 CBARPQ8N350 705 aaPredicted RBP4.68□□□□□ -1.66
HERC1-201ENST00000443617 AIF1LQ9BQI0 150 aa4.68□□□□□ -1.66
HERC1-201ENST00000443617 HRH4Q9H3N8 390 aa4.68□□□□□ -1.66
HERC1-201ENST00000443617 SERTM1A2A2V5 107 aa4.68□□□□□ -1.66
HERC1-201ENST00000443617 FBP1P09467 338 aa4.68□□□□□ -1.66
HERC1-201ENST00000443617 DRD2P14416 443 aa4.68□□□□□ -1.66
HERC1-201ENST00000443617 SLC6A12P48065 614 aa4.68□□□□□ -1.66
HERC1-201ENST00000443617 OR12D2P58182 307 aa4.68□□□□□ -1.66
HERC1-201ENST00000443617 CDK5Q00535 292 aa4.68□□□□□ -1.66
HERC1-201ENST00000443617 PDE7AQ13946 482 aa4.68□□□□□ -1.66
HERC1-201ENST00000443617 FAM71E1Q6IPT2 247 aa4.68□□□□□ -1.66
HERC1-201ENST00000443617 SSX9Q7RTT3 188 aa4.68□□□□□ -1.66
HERC1-201ENST00000443617 RANBP3LQ86VV4 465 aaPredicted RBP4.68□□□□□ -1.66
HERC1-201ENST00000443617 STEAP2Q8NFT2 490 aa4.68□□□□□ -1.66
HERC1-201ENST00000443617 OR11G2Q8NGC1 345 aa4.68□□□□□ -1.66
HERC1-201ENST00000443617 CMTM3Q96MX0 182 aa4.68□□□□□ -1.66
HERC1-201ENST00000443617 CALML5Q9NZT1 146 aa4.68□□□□□ -1.66
HERC1-201ENST00000443617 TRBV2A0A0J9YWF9 115 aa4.68□□□□□ -1.66
HERC1-201ENST00000443617 MBLAC1A4D2B0 266 aaPredicted RBP4.68□□□□□ -1.66
HERC1-201ENST00000443617 LINC01387J3KSC0 135 aa4.68□□□□□ -1.66
HERC1-201ENST00000443617 NPC1O15118 1278 aa4.68□□□□□ -1.66
HERC1-201ENST00000443617 SUSD5O60279 629 aa4.68□□□□□ -1.66
HERC1-201ENST00000443617 MT-ND4LP03901 98 aa4.68□□□□□ -1.66
HERC1-201ENST00000443617 GJA1P17302 382 aa4.68□□□□□ -1.66
HERC1-201ENST00000443617 FPR3P25089 353 aa4.68□□□□□ -1.66
HERC1-201ENST00000443617 ITPKBP27987 946 aa4.68□□□□□ -1.66
HERC1-201ENST00000443617 SKP1P63208 163 aa4.68□□□□□ -1.66
HERC1-201ENST00000443617 SIRPAP78324 504 aa4.68□□□□□ -1.66
HERC1-201ENST00000443617 RING1Q06587 406 aa4.68□□□□□ -1.66
HERC1-201ENST00000443617 ACSM1Q08AH1 577 aa4.68□□□□□ -1.66
HERC1-201ENST00000443617 OR7E24Q6IFN5 339 aa4.68□□□□□ -1.66
HERC1-201ENST00000443617 OVCH1Q7RTY7 1134 aa4.68□□□□□ -1.66
HERC1-201ENST00000443617 TMEM173Q86WV6 379 aaPredicted RBP4.68□□□□□ -1.66
HERC1-201ENST00000443617 FOXJ1Q92949 421 aa4.68□□□□□ -1.66
HERC1-201ENST00000443617 RAD51AP1Q96B01 352 aa4.68□□□□□ -1.66
HERC1-201ENST00000443617 ZDHHC5Q9C0B5 715 aa4.68□□□□□ -1.66
HERC1-201ENST00000443617 SLC25A18Q9H1K4 315 aa4.68□□□□□ -1.66
HERC1-201ENST00000443617 LRFN2Q9ULH4 789 aa4.68□□□□□ -1.66
HERC1-201ENST00000443617 MPC1LP0DKB6 136 aa4.68□□□□□ -1.66
HERC1-201ENST00000443617 HSD17B2P37059 387 aa4.68□□□□□ -1.66
HERC1-201ENST00000443617 RAE1P78406 368 aaKnown RBP4.68□□□□□ -1.66
HERC1-201ENST00000443617 MUC20Q8N307 709 aaPredicted RBP4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms