RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 LCN10Q6JVE6 187 aa7.46□□□□□ -1.22
CCDC39-201ENST00000442201 TCTN3Q6NUS6 607 aa7.46□□□□□ -1.22
CCDC39-201ENST00000442201 MRPL14Q6P1L8 145 aaKnown RBP7.46□□□□□ -1.22
CCDC39-201ENST00000442201 TTC33Q6PID6 262 aaPredicted RBP7.46□□□□□ -1.22
CCDC39-201ENST00000442201 DHRS13Q6UX07 377 aa7.46□□□□□ -1.22
CCDC39-201ENST00000442201 NPSR1Q6W5P4 371 aa7.46□□□□□ -1.22
CCDC39-201ENST00000442201 DEF8Q6ZN54 512 aa7.46□□□□□ -1.22
CCDC39-201ENST00000442201 PIP4P1Q86T03 277 aa7.46□□□□□ -1.22
CCDC39-201ENST00000442201 ZNF321PQ8N8H1 164 aa7.46□□□□□ -1.22
CCDC39-201ENST00000442201 ZFAND1Q8TCF1 268 aa7.46□□□□□ -1.22
CCDC39-201ENST00000442201 ZNF721Q8TF20 911 aa7.46□□□□□ -1.22
CCDC39-201ENST00000442201 SNAPC3Q92966 411 aa7.46□□□□□ -1.22
CCDC39-201ENST00000442201 PTP4A1Q93096 173 aa7.46□□□□□ -1.22
CCDC39-201ENST00000442201 G6PC3Q9BUM1 346 aa7.46□□□□□ -1.22
CCDC39-201ENST00000442201 PPA2Q9H2U2 334 aa7.46□□□□□ -1.22
CCDC39-201ENST00000442201 WDR54Q9H977 334 aa7.46□□□□□ -1.22
CCDC39-201ENST00000442201 AKIRIN1Q9H9L7 192 aaPredicted RBP7.46□□□□□ -1.22
CCDC39-201ENST00000442201 POLE4Q9NR33 117 aa7.46□□□□□ -1.22
CCDC39-201ENST00000442201 FBXO34Q9NWN3 711 aa7.46□□□□□ -1.22
CCDC39-201ENST00000442201 PISDQ9UG56 409 aa7.46□□□□□ -1.22
CCDC39-201ENST00000442201 ZNF443Q9Y2A4 671 aaPredicted RBP7.46□□□□□ -1.22
CCDC39-201ENST00000442201 GPR55Q9Y2T6 319 aaPredicted RBP7.46□□□□□ -1.22
CCDC39-201ENST00000442201 B3GALT1Q9Y5Z6 326 aa7.46□□□□□ -1.22
CCDC39-201ENST00000442201 SCN2AQ99250 2005 aa7.46□□□□□ -1.22
CCDC39-201ENST00000442201 DMDP11532 3685 aa7.46□□□□□ -1.22
CCDC39-201ENST00000442201 HMX3A6NHT5 357 aa7.46□□□□□ -1.22
CCDC39-201ENST00000442201 J3KTA2 159 aa7.46□□□□□ -1.22
CCDC39-201ENST00000442201 GADD45GO95257 159 aa7.46□□□□□ -1.22
CCDC39-201ENST00000442201 GUSBP08236 651 aa7.46□□□□□ -1.22
CCDC39-201ENST00000442201 PRKACGP22612 351 aa7.46□□□□□ -1.22
CCDC39-201ENST00000442201 UQCRC1P31930 480 aa7.46□□□□□ -1.22
CCDC39-201ENST00000442201 PIGAP37287 484 aa7.46□□□□□ -1.22
CCDC39-201ENST00000442201 ETV5P41161 510 aa7.46□□□□□ -1.22
CCDC39-201ENST00000442201 CLDN6P56747 220 aa7.46□□□□□ -1.22
CCDC39-201ENST00000442201 TEKQ02763 1124 aa7.46□□□□□ -1.22
CCDC39-201ENST00000442201 EIF3IQ13347 325 aaKnown RBP7.46□□□□□ -1.22
CCDC39-201ENST00000442201 FLYWCH1Q4VC44 716 aa7.46□□□□□ -1.22
CCDC39-201ENST00000442201 EIPR1Q53HC9 387 aa7.46□□□□□ -1.22
CCDC39-201ENST00000442201 ZBTB37Q5TC79 503 aa7.46□□□□□ -1.22
CCDC39-201ENST00000442201 HLA-DQA1Q5Y7H0 255 aa7.46□□□□□ -1.22
CCDC39-201ENST00000442201 XAF1Q6GPH4 301 aa7.46□□□□□ -1.22
CCDC39-201ENST00000442201 ANKRD37Q7Z713 158 aa7.46□□□□□ -1.22
CCDC39-201ENST00000442201 NOXA1Q86UR1 476 aa7.46□□□□□ -1.22
CCDC39-201ENST00000442201 RBM45Q8IUH3 476 aaKnown RBP7.46□□□□□ -1.22
CCDC39-201ENST00000442201 OR4M1Q8NGD0 313 aa7.46□□□□□ -1.22
CCDC39-201ENST00000442201 OR4N2Q8NGD1 307 aa7.46□□□□□ -1.22
CCDC39-201ENST00000442201 OR4D11Q8NGI4 311 aa7.46□□□□□ -1.22
CCDC39-201ENST00000442201 OR1N1Q8NGS0 311 aa7.46□□□□□ -1.22
CCDC39-201ENST00000442201 TAAR9Q96RI9 348 aa7.46□□□□□ -1.22
CCDC39-201ENST00000442201 NUDT9Q9BW91 350 aa7.46□□□□□ -1.22
CCDC39-201ENST00000442201 SMURF2Q9HAU4 748 aa7.46□□□□□ -1.22
CCDC39-201ENST00000442201 USE1Q9NZ43 259 aa7.46□□□□□ -1.22
CCDC39-201ENST00000442201 PDP1Q9P0J1 537 aaPredicted RBP7.46□□□□□ -1.22
CCDC39-201ENST00000442201 C19orf25Q9UFG5 118 aaPredicted RBP7.46□□□□□ -1.22
CCDC39-201ENST00000442201 CBLCQ9ULV8 474 aa7.46□□□□□ -1.22
CCDC39-201ENST00000442201 BOLA1Q9Y3E2 137 aa7.46□□□□□ -1.22
CCDC39-201ENST00000442201 LYVE1Q9Y5Y7 322 aa7.46□□□□□ -1.22
CCDC39-201ENST00000442201 CCDC187A0A096LP49 1063 aa7.45□□□□□ -1.22
CCDC39-201ENST00000442201 PLD2O14939 933 aa7.45□□□□□ -1.22
CCDC39-201ENST00000442201 BCAS1O75363 584 aaPredicted RBP7.45□□□□□ -1.22
CCDC39-201ENST00000442201 WDPCPO95876 746 aa7.45□□□□□ -1.22
CCDC39-201ENST00000442201 EPPINO95925 133 aa7.45□□□□□ -1.22
CCDC39-201ENST00000442201 THRBP10828 461 aa7.45□□□□□ -1.22
CCDC39-201ENST00000442201 PSKH1P11801 424 aa7.45□□□□□ -1.22
CCDC39-201ENST00000442201 CBLP22681 906 aa7.45□□□□□ -1.22
CCDC39-201ENST00000442201 DCAF7P61962 342 aa7.45□□□□□ -1.22
CCDC39-201ENST00000442201 KRR1Q13601 381 aaKnown RBP7.45□□□□□ -1.22
CCDC39-201ENST00000442201 GANABQ14697 944 aaKnown RBP7.45□□□□□ -1.22
CCDC39-201ENST00000442201 LAPTM4AQ15012 233 aa7.45□□□□□ -1.22
CCDC39-201ENST00000442201 SLC36A3Q495N2 470 aa7.45□□□□□ -1.22
CCDC39-201ENST00000442201 FAM199XQ6PEV8 388 aaPredicted RBP7.45□□□□□ -1.22
CCDC39-201ENST00000442201 ZNF773Q6PK81 442 aa7.45□□□□□ -1.22
CCDC39-201ENST00000442201 COMTD1Q86VU5 262 aa7.45□□□□□ -1.22
CCDC39-201ENST00000442201 PLCZ1Q86YW0 608 aa7.45□□□□□ -1.22
CCDC39-201ENST00000442201 OR6T1Q8NGN1 323 aa7.45□□□□□ -1.22
CCDC39-201ENST00000442201 UFD1Q92890 307 aa7.45□□□□□ -1.22
CCDC39-201ENST00000442201 RDH12Q96NR8 316 aa7.45□□□□□ -1.22
CCDC39-201ENST00000442201 GAL3ST4Q96RP7 486 aa7.45□□□□□ -1.22
CCDC39-201ENST00000442201 GABARAPL1Q9H0R8 117 aa7.45□□□□□ -1.22
CCDC39-201ENST00000442201 PFDN2Q9UHV9 154 aa7.45□□□□□ -1.22
CCDC39-201ENST00000442201 ORC6Q9Y5N6 252 aa7.45□□□□□ -1.22
CCDC39-201ENST00000442201 RALGAPA1Q6GYQ0 2036 aa7.45□□□□□ -1.22
CCDC39-201ENST00000442201 EP300Q09472 2414 aaPredicted RBP7.45□□□□□ -1.22
CCDC39-201ENST00000442201 NPIPA5A0A0B4J1W7 369 aa7.45□□□□□ -1.22
CCDC39-201ENST00000442201 IGHV3-20A0A0C4DH32 117 aa7.45□□□□□ -1.22
CCDC39-201ENST00000442201 C2orf92A0A1B0GVN3 265 aa7.45□□□□□ -1.22
CCDC39-201ENST00000442201 OR6C76A6NM76 312 aa7.45□□□□□ -1.22
CCDC39-201ENST00000442201 NPIPA7E9PJI5 369 aa7.45□□□□□ -1.22
CCDC39-201ENST00000442201 PEX12O00623 359 aa7.45□□□□□ -1.22
CCDC39-201ENST00000442201 SSX5O60225 188 aa7.45□□□□□ -1.22
CCDC39-201ENST00000442201 HS6ST1O60243 411 aa7.45□□□□□ -1.22
CCDC39-201ENST00000442201 UGT2B17O75795 530 aa7.45□□□□□ -1.22
CCDC39-201ENST00000442201 STK17BO94768 372 aa7.45□□□□□ -1.22
CCDC39-201ENST00000442201 NPIPA8P0DM63 369 aa7.45□□□□□ -1.22
CCDC39-201ENST00000442201 NID1P14543 1247 aa7.45□□□□□ -1.22
CCDC39-201ENST00000442201 DRD5P21918 477 aa7.45□□□□□ -1.22
CCDC39-201ENST00000442201 RPS4Y1P22090 263 aaKnown RBP7.45□□□□□ -1.22
CCDC39-201ENST00000442201 RGS8P57771 180 aaPredicted RBP7.45□□□□□ -1.22
CCDC39-201ENST00000442201 SMIM11AP58511 58 aa7.45□□□□□ -1.22
CCDC39-201ENST00000442201 DBPQ10586 325 aaPredicted RBP7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 153.3 ms