RNA–Protein interactions for RNA: ENST00000441580.5

CPSF4-206, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2 BASIC

Gene CPSF4, Length 942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-206ENST00000441580 CCR4P51679 360 aa12.09□□□□□ -0.47
CPSF4-206ENST00000441580 EFNA3P52797 238 aa12.09□□□□□ -0.47
CPSF4-206ENST00000441580 PNLIPRP2P54317 469 aa12.09□□□□□ -0.47
CPSF4-206ENST00000441580 NRG3P56975 720 aa12.09□□□□□ -0.47
CPSF4-206ENST00000441580 CRYZQ08257 329 aaKnown RBP12.09□□□□□ -0.47
CPSF4-206ENST00000441580 EFR3AQ14156 821 aa12.09□□□□□ -0.47
CPSF4-206ENST00000441580 IL11RAQ14626 422 aa12.09□□□□□ -0.47
CPSF4-206ENST00000441580 SPHARQ15513 63 aa12.09□□□□□ -0.47
CPSF4-206ENST00000441580 MOGQ16653 247 aa12.09□□□□□ -0.47
CPSF4-206ENST00000441580 TSTQ16762 297 aaKnown RBP12.09□□□□□ -0.47
CPSF4-206ENST00000441580 ELOA3BQ3SY89 546 aa12.09□□□□□ -0.47
CPSF4-206ENST00000441580 PHF19Q5T6S3 580 aa12.09□□□□□ -0.47
CPSF4-206ENST00000441580 ZNF385CQ66K41 422 aaPredicted RBP12.09□□□□□ -0.47
CPSF4-206ENST00000441580 NIPAL3Q6P499 406 aa12.09□□□□□ -0.47
CPSF4-206ENST00000441580 GDPGP1Q6ZNW5 385 aa12.09□□□□□ -0.47
CPSF4-206ENST00000441580 ADCK1Q86TW2 530 aa12.09□□□□□ -0.47
CPSF4-206ENST00000441580 SLCO6A1Q86UG4 719 aa12.09□□□□□ -0.47
CPSF4-206ENST00000441580 MISPQ8IVT2 679 aa12.09□□□□□ -0.47
CPSF4-206ENST00000441580 PRSS58Q8IYP2 241 aa12.09□□□□□ -0.47
CPSF4-206ENST00000441580 NANOGP1Q8N7R0 232 aa12.09□□□□□ -0.47
CPSF4-206ENST00000441580 PSD4Q8NDX1 1056 aa12.09□□□□□ -0.47
CPSF4-206ENST00000441580 ELOA3Q8NG57 546 aa12.09□□□□□ -0.47
CPSF4-206ENST00000441580 OR4C3Q8NH37 302 aa12.09□□□□□ -0.47
CPSF4-206ENST00000441580 NUBPLQ8TB37 319 aa12.09□□□□□ -0.47
CPSF4-206ENST00000441580 NDNFQ8TB73 568 aa12.09□□□□□ -0.47
CPSF4-206ENST00000441580 PHOSPHO1Q8TCT1 267 aa12.09□□□□□ -0.47
CPSF4-206ENST00000441580 BORCS5Q969J3 196 aa12.09□□□□□ -0.47
CPSF4-206ENST00000441580 TP53INP1Q96A56 240 aa12.09□□□□□ -0.47
CPSF4-206ENST00000441580 C3orf49Q96BT1 292 aa12.09□□□□□ -0.47
CPSF4-206ENST00000441580 OMA1Q96E52 524 aa12.09□□□□□ -0.47
CPSF4-206ENST00000441580 OPALINQ96PE5 141 aa12.09□□□□□ -0.47
CPSF4-206ENST00000441580 OR5M11Q96RB7 305 aa12.09□□□□□ -0.47
CPSF4-206ENST00000441580 TMEM43Q9BTV4 400 aa12.09□□□□□ -0.47
CPSF4-206ENST00000441580 IFT27Q9BW83 186 aa12.09□□□□□ -0.47
CPSF4-206ENST00000441580 SEMA4CQ9C0C4 833 aa12.09□□□□□ -0.47
CPSF4-206ENST00000441580 LAT2Q9GZY6 243 aa12.09□□□□□ -0.47
CPSF4-206ENST00000441580 SLC26A1Q9H2B4 701 aa12.09□□□□□ -0.47
CPSF4-206ENST00000441580 ATP13A2Q9NQ11 1180 aa12.09□□□□□ -0.47
CPSF4-206ENST00000441580 MEPEQ9NQ76 525 aaPredicted RBP12.09□□□□□ -0.47
CPSF4-206ENST00000441580 SLC22A11Q9NSA0 550 aa12.09□□□□□ -0.47
CPSF4-206ENST00000441580 H2AFY2Q9P0M6 372 aaPredicted RBP12.09□□□□□ -0.47
CPSF4-206ENST00000441580 SEC14L4Q9UDX3 406 aa12.09□□□□□ -0.47
CPSF4-206ENST00000441580 PPIEQ9UNP9 301 aaKnown RBP12.09□□□□□ -0.47
CPSF4-206ENST00000441580 GPR52Q9Y2T5 361 aa12.09□□□□□ -0.47
CPSF4-206ENST00000441580 PCDHGB2Q9Y5G2 931 aa12.09□□□□□ -0.47
CPSF4-206ENST00000441580 PCDHGA3Q9Y5H0 932 aa12.09□□□□□ -0.47
CPSF4-206ENST00000441580 SPTBP11277 2137 aa12.08□□□□□ -0.47
CPSF4-206ENST00000441580 PI4KAP42356 2102 aa12.08□□□□□ -0.47
CPSF4-206ENST00000441580 SLC22A31A6NKX4 558 aa12.08□□□□□ -0.48
CPSF4-206ENST00000441580 VSTM2BA6NLU5 285 aa12.08□□□□□ -0.48
CPSF4-206ENST00000441580 IDSB3KWA1 339 aa12.08□□□□□ -0.48
CPSF4-206ENST00000441580 ALG1L2C9J202 215 aa12.08□□□□□ -0.48
CPSF4-206ENST00000441580 EIF4E2O60573 245 aaKnown RBP12.08□□□□□ -0.48
CPSF4-206ENST00000441580 TSPAN2O60636 221 aa12.08□□□□□ -0.48
CPSF4-206ENST00000441580 ADAM11O75078 769 aa12.08□□□□□ -0.48
CPSF4-206ENST00000441580 REM1O75628 298 aa12.08□□□□□ -0.48
CPSF4-206ENST00000441580 NDUFB2O95178 105 aa12.08□□□□□ -0.48
CPSF4-206ENST00000441580 CH25HO95992 272 aa12.08□□□□□ -0.48
CPSF4-206ENST00000441580 ATXN8OSP0DMR3 200 aa12.08□□□□□ -0.48
CPSF4-206ENST00000441580 PTNP21246 168 aa12.08□□□□□ -0.48
CPSF4-206ENST00000441580 NR4A1P22736 598 aa12.08□□□□□ -0.48
CPSF4-206ENST00000441580 GRK6P43250 576 aa12.08□□□□□ -0.48
CPSF4-206ENST00000441580 NR0B1P51843 470 aaKnown RBP12.08□□□□□ -0.48
CPSF4-206ENST00000441580 MLLT10P55197 1068 aa12.08□□□□□ -0.48
CPSF4-206ENST00000441580 WNT4P56705 351 aa12.08□□□□□ -0.48
CPSF4-206ENST00000441580 FXYD6P3P58550 94 aa12.08□□□□□ -0.48
CPSF4-206ENST00000441580 VBP1P61758 197 aa12.08□□□□□ -0.48
CPSF4-206ENST00000441580 NCS1P62166 190 aa12.08□□□□□ -0.48
CPSF4-206ENST00000441580 CD226Q15762 336 aa12.08□□□□□ -0.48
CPSF4-206ENST00000441580 NDUFAF6Q330K2 333 aa12.08□□□□□ -0.48
CPSF4-206ENST00000441580 ANKDD1AQ495B1 522 aa12.08□□□□□ -0.48
CPSF4-206ENST00000441580 PWWP2BQ6NUJ5 590 aa12.08□□□□□ -0.48
CPSF4-206ENST00000441580 C19orf48Q6RUI8 117 aa12.08□□□□□ -0.48
CPSF4-206ENST00000441580 LANCL3Q6ZV70 420 aa12.08□□□□□ -0.48
CPSF4-206ENST00000441580 OVCH1Q7RTY7 1134 aa12.08□□□□□ -0.48
CPSF4-206ENST00000441580 NUP54Q7Z3B4 507 aa12.08□□□□□ -0.48
CPSF4-206ENST00000441580 ANKRD37Q7Z713 158 aa12.08□□□□□ -0.48
CPSF4-206ENST00000441580 OAFQ86UD1 273 aa12.08□□□□□ -0.48
CPSF4-206ENST00000441580 ZBTB44Q8NCP5 570 aa12.08□□□□□ -0.48
CPSF4-206ENST00000441580 AGBL5Q8NDL9 886 aa12.08□□□□□ -0.48
CPSF4-206ENST00000441580 DYNC2LI1Q8TCX1 351 aa12.08□□□□□ -0.48
CPSF4-206ENST00000441580 S100ZQ8WXG8 99 aa12.08□□□□□ -0.48
CPSF4-206ENST00000441580 VMP1Q96GC9 406 aa12.08□□□□□ -0.48
CPSF4-206ENST00000441580 LOXL4Q96JB6 756 aa12.08□□□□□ -0.48
CPSF4-206ENST00000441580 LMF1Q96S06 567 aa12.08□□□□□ -0.48
CPSF4-206ENST00000441580 TBL1XR1Q9BZK7 514 aa12.08□□□□□ -0.48
CPSF4-206ENST00000441580 WDR12Q9GZL7 423 aaKnown RBP12.08□□□□□ -0.48
CPSF4-206ENST00000441580 DCSTAMPQ9H295 470 aa12.08□□□□□ -0.48
CPSF4-206ENST00000441580 WDR54Q9H977 334 aa12.08□□□□□ -0.48
CPSF4-206ENST00000441580 HINT3Q9NQE9 182 aaKnown RBP12.08□□□□□ -0.48
CPSF4-206ENST00000441580 INPP5EQ9NRR6 644 aa12.08□□□□□ -0.48
CPSF4-206ENST00000441580 WDR70Q9NW82 654 aa12.08□□□□□ -0.48
CPSF4-206ENST00000441580 NDUFB11Q9NX14 153 aa12.08□□□□□ -0.48
CPSF4-206ENST00000441580 KLHL21Q9UJP4 597 aa12.08□□□□□ -0.48
CPSF4-206ENST00000441580 ZNF337Q9Y3M9 751 aa12.08□□□□□ -0.48
CPSF4-206ENST00000441580 A3GALT2U3KPV4 340 aa12.08□□□□□ -0.48
CPSF4-206ENST00000441580 RP1P56715 2156 aa12.08□□□□□ -0.48
CPSF4-206ENST00000441580 ADAMTS9Q9P2N4 1935 aa12.07□□□□□ -0.48
CPSF4-206ENST00000441580 TRAV27A0A087WT01 109 aa12.07□□□□□ -0.48
CPSF4-206ENST00000441580 OR6C70A6NIJ9 312 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms