RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 ELOVL5Q9NYP7 299 aa9.4□□□□□ -0.9
MCF2L-216ENST00000439475 LEF1Q9UJU2 399 aaPredicted RBP9.4□□□□□ -0.9
MCF2L-216ENST00000439475 EDARQ9UNE0 448 aa9.4□□□□□ -0.9
MCF2L-216ENST00000439475 PROCRQ9UNN8 238 aa9.4□□□□□ -0.9
MCF2L-216ENST00000439475 CORO2BQ9UQ03 480 aa9.4□□□□□ -0.9
MCF2L-216ENST00000439475 IFT52Q9Y366 437 aa9.4□□□□□ -0.9
MCF2L-216ENST00000439475 NDUFAF1Q9Y375 327 aa9.4□□□□□ -0.9
MCF2L-216ENST00000439475 PCDHB14Q9Y5E9 798 aa9.4□□□□□ -0.9
MCF2L-216ENST00000439475 PRAMEF27A3QJZ7 478 aa9.39□□□□□ -0.91
MCF2L-216ENST00000439475 ANGPT2O15123 496 aa9.39□□□□□ -0.91
MCF2L-216ENST00000439475 DNAJA2O60884 412 aa9.39□□□□□ -0.91
MCF2L-216ENST00000439475 TNFSF13O75888 250 aa9.39□□□□□ -0.91
MCF2L-216ENST00000439475 GOSR1O95249 250 aa9.39□□□□□ -0.91
MCF2L-216ENST00000439475 BCHEP06276 602 aa9.39□□□□□ -0.91
MCF2L-216ENST00000439475 CHRM4P08173 479 aa9.39□□□□□ -0.91
MCF2L-216ENST00000439475 VIMP08670 466 aaKnown RBP9.39□□□□□ -0.91
MCF2L-216ENST00000439475 CD8BP10966 210 aa9.39□□□□□ -0.91
MCF2L-216ENST00000439475 EPXP11678 715 aa9.39□□□□□ -0.91
MCF2L-216ENST00000439475 NID1P14543 1247 aa9.39□□□□□ -0.91
MCF2L-216ENST00000439475 IL11P20809 199 aa9.39□□□□□ -0.91
MCF2L-216ENST00000439475 KIR2DL2P43627 348 aaPredicted RBP9.39□□□□□ -0.91
MCF2L-216ENST00000439475 KCNJ5P48544 419 aa9.39□□□□□ -0.91
MCF2L-216ENST00000439475 PCYT1AP49585 367 aa9.39□□□□□ -0.91
MCF2L-216ENST00000439475 MAP2K6P52564 334 aa9.39□□□□□ -0.91
MCF2L-216ENST00000439475 ARFIP2P53365 341 aa9.39□□□□□ -0.91
MCF2L-216ENST00000439475 RAC3P60763 192 aa9.39□□□□□ -0.91
MCF2L-216ENST00000439475 COPZ1P61923 177 aa9.39□□□□□ -0.91
MCF2L-216ENST00000439475 FUT5Q11128 374 aa9.39□□□□□ -0.91
MCF2L-216ENST00000439475 MERTKQ12866 999 aa9.39□□□□□ -0.91
MCF2L-216ENST00000439475 SKP2Q13309 424 aa9.39□□□□□ -0.91
MCF2L-216ENST00000439475 RNPS1Q15287 305 aaKnown RBP9.39□□□□□ -0.91
MCF2L-216ENST00000439475 RGNQ15493 299 aa9.39□□□□□ -0.91
MCF2L-216ENST00000439475 LIN52Q52LA3 116 aa9.39□□□□□ -0.91
MCF2L-216ENST00000439475 TMEM201Q5SNT2 666 aa9.39□□□□□ -0.91
MCF2L-216ENST00000439475 LRIF1Q5T3J3 769 aa9.39□□□□□ -0.91
MCF2L-216ENST00000439475 PRAMEF8Q5VWM4 474 aa9.39□□□□□ -0.91
MCF2L-216ENST00000439475 PRAMEF7Q5VXH5 474 aa9.39□□□□□ -0.91
MCF2L-216ENST00000439475 FBXW10Q5XX13 1052 aa9.39□□□□□ -0.91
MCF2L-216ENST00000439475 PLEKHM3Q6ZWE6 761 aa9.39□□□□□ -0.91
MCF2L-216ENST00000439475 ZNF550Q7Z398 422 aa9.39□□□□□ -0.91
MCF2L-216ENST00000439475 STK32CQ86UX6 486 aa9.39□□□□□ -0.91
MCF2L-216ENST00000439475 TMEM200AQ86VY9 491 aa9.39□□□□□ -0.91
MCF2L-216ENST00000439475 FUNDC1Q8IVP5 155 aa9.39□□□□□ -0.91
MCF2L-216ENST00000439475 ZZZ3Q8IYH5 903 aa9.39□□□□□ -0.91
MCF2L-216ENST00000439475 SLC43A2Q8N370 569 aa9.39□□□□□ -0.91
MCF2L-216ENST00000439475 OR52P1PQ8NH57 321 aa9.39□□□□□ -0.91
MCF2L-216ENST00000439475 ZG16BQ96DA0 208 aa9.39□□□□□ -0.91
MCF2L-216ENST00000439475 STARD4Q96DR4 205 aa9.39□□□□□ -0.91
MCF2L-216ENST00000439475 ZHX1-C8orf76Q96EF9 292 aa9.39□□□□□ -0.91
MCF2L-216ENST00000439475 NPAS1Q99742 590 aa9.39□□□□□ -0.91
MCF2L-216ENST00000439475 TACO1Q9BSH4 297 aaKnown RBP9.39□□□□□ -0.91
MCF2L-216ENST00000439475 PAIP1Q9H074 479 aaKnown RBP9.39□□□□□ -0.91
MCF2L-216ENST00000439475 QRSL1Q9H0R6 528 aaKnown RBP9.39□□□□□ -0.91
MCF2L-216ENST00000439475 MPDZO75970 2070 aa9.38□□□□□ -0.91
MCF2L-216ENST00000439475 ENO4A6NNW6 628 aa9.38□□□□□ -0.91
MCF2L-216ENST00000439475 ETV2O00321 342 aaPredicted RBP9.38□□□□□ -0.91
MCF2L-216ENST00000439475 AQP8O94778 261 aa9.38□□□□□ -0.91
MCF2L-216ENST00000439475 PRKD3O94806 890 aa9.38□□□□□ -0.91
MCF2L-216ENST00000439475 NTN1O95631 604 aa9.38□□□□□ -0.91
MCF2L-216ENST00000439475 THBS1P07996 1170 aa9.38□□□□□ -0.91
MCF2L-216ENST00000439475 TFPTP0C1Z6 253 aa9.38□□□□□ -0.91
MCF2L-216ENST00000439475 TFPIP10646 304 aa9.38□□□□□ -0.91
MCF2L-216ENST00000439475 BMP2P12643 396 aa9.38□□□□□ -0.91
MCF2L-216ENST00000439475 POU2F1P14859 743 aa9.38□□□□□ -0.91
MCF2L-216ENST00000439475 ENPP1P22413 925 aa9.38□□□□□ -0.91
MCF2L-216ENST00000439475 CPOXP36551 454 aa9.38□□□□□ -0.91
MCF2L-216ENST00000439475 CD79BP40259 229 aa9.38□□□□□ -0.91
MCF2L-216ENST00000439475 IDH2P48735 452 aaKnown RBP9.38□□□□□ -0.91
MCF2L-216ENST00000439475 CLK1P49759 484 aaKnown RBP9.38□□□□□ -0.91
MCF2L-216ENST00000439475 MVDP53602 400 aa9.38□□□□□ -0.91
MCF2L-216ENST00000439475 CSNK2A1P68400 391 aaPredicted RBP9.38□□□□□ -0.91
MCF2L-216ENST00000439475 CTU2Q2VPK5 515 aaKnown RBP9.38□□□□□ -0.91
MCF2L-216ENST00000439475 GTDC1Q4AE62 458 aa9.38□□□□□ -0.91
MCF2L-216ENST00000439475 VWA1Q6PCB0 445 aa9.38□□□□□ -0.91
MCF2L-216ENST00000439475 BTLAQ7Z6A9 289 aa9.38□□□□□ -0.91
MCF2L-216ENST00000439475 FAM71CQ8NEG0 241 aa9.38□□□□□ -0.91
MCF2L-216ENST00000439475 OR6K3Q8NGY3 331 aa9.38□□□□□ -0.91
MCF2L-216ENST00000439475 BBS10Q8TAM1 723 aa9.38□□□□□ -0.91
MCF2L-216ENST00000439475 SLC38A5Q8WUX1 472 aa9.38□□□□□ -0.91
MCF2L-216ENST00000439475 CNOT9Q92600 299 aaKnown RBP9.38□□□□□ -0.91
MCF2L-216ENST00000439475 TMEM19Q96HH6 336 aa9.38□□□□□ -0.91
MCF2L-216ENST00000439475 LURAP1Q96LR2 239 aa9.38□□□□□ -0.91
MCF2L-216ENST00000439475 DACH2Q96NX9 599 aa9.38□□□□□ -0.91
MCF2L-216ENST00000439475 SPATA5L1Q9BVQ7 753 aa9.38□□□□□ -0.91
MCF2L-216ENST00000439475 GP6Q9HCN6 339 aa9.38□□□□□ -0.91
MCF2L-216ENST00000439475 PLSCR4Q9NRQ2 329 aa9.38□□□□□ -0.91
MCF2L-216ENST00000439475 SLC6A13Q9NSD5 602 aa9.38□□□□□ -0.91
MCF2L-216ENST00000439475 GALNT8Q9NY28 637 aa9.38□□□□□ -0.91
MCF2L-216ENST00000439475 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.38□□□□□ -0.91
MCF2L-216ENST00000439475 CENPVL1A0A0U1RR11 272 aa9.37□□□□□ -0.91
MCF2L-216ENST00000439475 CFAP73A6NFT4 308 aa9.37□□□□□ -0.91
MCF2L-216ENST00000439475 SULT2B1O00204 365 aa9.37□□□□□ -0.91
MCF2L-216ENST00000439475 FAAHO00519 579 aa9.37□□□□□ -0.91
MCF2L-216ENST00000439475 EFNA2O43921 213 aa9.37□□□□□ -0.91
MCF2L-216ENST00000439475 SS18L1O75177 396 aaPredicted RBP9.37□□□□□ -0.91
MCF2L-216ENST00000439475 C1QCP02747 245 aa9.37□□□□□ -0.91
MCF2L-216ENST00000439475 RPS4Y1P22090 263 aaKnown RBP9.37□□□□□ -0.91
MCF2L-216ENST00000439475 SNTB1Q13884 538 aaKnown RBP9.37□□□□□ -0.91
MCF2L-216ENST00000439475 DAZAP2Q15038 168 aaPredicted RBP9.37□□□□□ -0.91
MCF2L-216ENST00000439475 ZNF311Q5JNZ3 666 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms