RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 PTH2RP49190 550 aa6.23□□□□□ -1.41
CSDE1-205ENST00000438362 GZMKP49863 264 aa6.23□□□□□ -1.41
CSDE1-205ENST00000438362 ERVFC1P60507 584 aa6.23□□□□□ -1.41
CSDE1-205ENST00000438362 FOXK2Q01167 660 aa6.23□□□□□ -1.41
CSDE1-205ENST00000438362 TOMM20Q15388 145 aa6.23□□□□□ -1.41
CSDE1-205ENST00000438362 RPE65Q16518 533 aa6.23□□□□□ -1.41
CSDE1-205ENST00000438362 MAPK14Q16539 360 aa6.23□□□□□ -1.41
CSDE1-205ENST00000438362 PCGF3Q3KNV8 242 aa6.23□□□□□ -1.41
CSDE1-205ENST00000438362 LRRC37A5PQ49AS3 106 aa6.23□□□□□ -1.41
CSDE1-205ENST00000438362 TMEM52BQ4KMG9 183 aa6.23□□□□□ -1.41
CSDE1-205ENST00000438362 MFSD12Q6NUT3 480 aa6.23□□□□□ -1.41
CSDE1-205ENST00000438362 RPL22L1Q6P5R6 122 aaKnown RBP6.23□□□□□ -1.41
CSDE1-205ENST00000438362 ULK3Q6PHR2 472 aa6.23□□□□□ -1.41
CSDE1-205ENST00000438362 FAM180AQ6UWF9 173 aa6.23□□□□□ -1.41
CSDE1-205ENST00000438362 OR6F1Q8NGZ6 308 aa6.23□□□□□ -1.41
CSDE1-205ENST00000438362 CASTOR1Q8WTX7 329 aa6.23□□□□□ -1.41
CSDE1-205ENST00000438362 MED18Q9BUE0 208 aa6.23□□□□□ -1.41
CSDE1-205ENST00000438362 FN3KQ9H479 309 aa6.23□□□□□ -1.41
CSDE1-205ENST00000438362 SYNPO2LQ9H987 977 aa6.23□□□□□ -1.41
CSDE1-205ENST00000438362 SFXN1Q9H9B4 322 aa6.23□□□□□ -1.41
CSDE1-205ENST00000438362 FGF20Q9NP95 211 aaPredicted RBP6.23□□□□□ -1.41
CSDE1-205ENST00000438362 HINT3Q9NQE9 182 aaKnown RBP6.23□□□□□ -1.41
CSDE1-205ENST00000438362 TAS2R3Q9NYW6 316 aa6.23□□□□□ -1.41
CSDE1-205ENST00000438362 ACTR10Q9NZ32 417 aa6.23□□□□□ -1.41
CSDE1-205ENST00000438362 DHDHQ9UQ10 334 aa6.23□□□□□ -1.41
CSDE1-205ENST00000438362 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.23□□□□□ -1.41
CSDE1-205ENST00000438362 NPFFR2Q9Y5X5 522 aa6.23□□□□□ -1.41
CSDE1-205ENST00000438362 URB1O60287 2271 aaKnown RBP6.23□□□□□ -1.41
CSDE1-205ENST00000438362 A0A1W2PR48 441 aa6.23□□□□□ -1.41
CSDE1-205ENST00000438362 CDHR4A6H8M9 788 aa6.23□□□□□ -1.41
CSDE1-205ENST00000438362 AGAP14A8MT82 685 aa6.23□□□□□ -1.41
CSDE1-205ENST00000438362 PEX14O75381 377 aa6.23□□□□□ -1.41
CSDE1-205ENST00000438362 GATBO75879 557 aaKnown RBP6.23□□□□□ -1.41
CSDE1-205ENST00000438362 VNN2O95498 520 aa6.23□□□□□ -1.41
CSDE1-205ENST00000438362 APOC3P02656 99 aa6.23□□□□□ -1.41
CSDE1-205ENST00000438362 PRSS3P35030 304 aa6.23□□□□□ -1.41
CSDE1-205ENST00000438362 ACTBP60709 375 aa6.23□□□□□ -1.41
CSDE1-205ENST00000438362 ACTG1P63261 375 aa6.23□□□□□ -1.41
CSDE1-205ENST00000438362 TNFRSF17Q02223 184 aa6.23□□□□□ -1.41
CSDE1-205ENST00000438362 DPTQ07507 201 aa6.23□□□□□ -1.41
CSDE1-205ENST00000438362 GPR176Q14439 515 aa6.23□□□□□ -1.41
CSDE1-205ENST00000438362 ESCO2Q56NI9 601 aa6.23□□□□□ -1.41
CSDE1-205ENST00000438362 RAB12Q6IQ22 244 aa6.23□□□□□ -1.41
CSDE1-205ENST00000438362 FAM111BQ6SJ93 734 aa6.23□□□□□ -1.41
CSDE1-205ENST00000438362 SLC29A4Q7RTT9 530 aa6.23□□□□□ -1.41
CSDE1-205ENST00000438362 C7orf61Q8IZ16 206 aa6.23□□□□□ -1.41
CSDE1-205ENST00000438362 BEST3Q8N1M1 668 aa6.23□□□□□ -1.41
CSDE1-205ENST00000438362 AVL9Q8NBF6 648 aa6.23□□□□□ -1.41
CSDE1-205ENST00000438362 PLA2G15Q8NCC3 412 aa6.23□□□□□ -1.41
CSDE1-205ENST00000438362 HAVCR2Q8TDQ0 301 aa6.23□□□□□ -1.41
CSDE1-205ENST00000438362 PEX11GQ96HA9 241 aa6.23□□□□□ -1.41
CSDE1-205ENST00000438362 WDFY2Q96P53 400 aa6.23□□□□□ -1.41
CSDE1-205ENST00000438362 DPYSL5Q9BPU6 564 aa6.23□□□□□ -1.41
CSDE1-205ENST00000438362 ARHGAP9Q9BRR9 750 aa6.23□□□□□ -1.41
CSDE1-205ENST00000438362 METTL17Q9H7H0 456 aaPredicted RBP6.23□□□□□ -1.41
CSDE1-205ENST00000438362 IL21RQ9HBE5 538 aa6.23□□□□□ -1.41
CSDE1-205ENST00000438362 C13orf42A0A1B0GVH6 325 aa6.22□□□□□ -1.41
CSDE1-205ENST00000438362 NPIPA5E9PKD4 350 aa6.22□□□□□ -1.41
CSDE1-205ENST00000438362 YY2O15391 372 aa6.22□□□□□ -1.41
CSDE1-205ENST00000438362 PRAMEF4O60810 478 aa6.22□□□□□ -1.41
CSDE1-205ENST00000438362 EGFP01133 1207 aa6.22□□□□□ -1.41
CSDE1-205ENST00000438362 ELK1P19419 428 aa6.22□□□□□ -1.41
CSDE1-205ENST00000438362 PSMB1P20618 241 aaKnown RBP6.22□□□□□ -1.41
CSDE1-205ENST00000438362 AGTR1P30556 359 aa6.22□□□□□ -1.41
CSDE1-205ENST00000438362 GDNFP39905 211 aa6.22□□□□□ -1.41
CSDE1-205ENST00000438362 KIR2DL3P43628 341 aa6.22□□□□□ -1.41
CSDE1-205ENST00000438362 DLX5P56178 289 aa6.22□□□□□ -1.41
CSDE1-205ENST00000438362 ERVK-25P63136 954 aa6.22□□□□□ -1.41
CSDE1-205ENST00000438362 SIRPAP78324 504 aa6.22□□□□□ -1.41
CSDE1-205ENST00000438362 GFOD2Q3B7J2 385 aa6.22□□□□□ -1.41
CSDE1-205ENST00000438362 PRAMEF9Q5VWM5 478 aa6.22□□□□□ -1.41
CSDE1-205ENST00000438362 ASTLQ6HA08 431 aaPredicted RBP6.22□□□□□ -1.41
CSDE1-205ENST00000438362 EIF5AL1Q6IS14 154 aaKnown RBP6.22□□□□□ -1.41
CSDE1-205ENST00000438362 C3P1Q6ZMU1 363 aa6.22□□□□□ -1.41
CSDE1-205ENST00000438362 ZNF620Q6ZNG0 422 aa6.22□□□□□ -1.41
CSDE1-205ENST00000438362 FCRLAQ7L513 359 aa6.22□□□□□ -1.41
CSDE1-205ENST00000438362 TMEM17Q86X19 198 aa6.22□□□□□ -1.41
CSDE1-205ENST00000438362 ZNF584Q8IVC4 421 aa6.22□□□□□ -1.41
CSDE1-205ENST00000438362 SIAH3Q8IW03 269 aa6.22□□□□□ -1.41
CSDE1-205ENST00000438362 METTL27Q8N6F8 245 aaPredicted RBP6.22□□□□□ -1.41
CSDE1-205ENST00000438362 OR2AJ1Q8NGZ0 328 aa6.22□□□□□ -1.41
CSDE1-205ENST00000438362 SYNPRQ8TBG9 265 aa6.22□□□□□ -1.41
CSDE1-205ENST00000438362 MS4A6EQ96DS6 147 aa6.22□□□□□ -1.41
CSDE1-205ENST00000438362 TNFRSF13CQ96RJ3 184 aa6.22□□□□□ -1.41
CSDE1-205ENST00000438362 PELOQ9BRX2 385 aaKnown RBP6.22□□□□□ -1.41
CSDE1-205ENST00000438362 CST11Q9H112 138 aa6.22□□□□□ -1.41
CSDE1-205ENST00000438362 OR52A5Q9H2C5 316 aa6.22□□□□□ -1.41
CSDE1-205ENST00000438362 NOX3Q9HBY0 568 aa6.22□□□□□ -1.41
CSDE1-205ENST00000438362 PLSCR3Q9NRY6 295 aa6.22□□□□□ -1.41
CSDE1-205ENST00000438362 NPIPA1Q9UND3 350 aa6.22□□□□□ -1.41
CSDE1-205ENST00000438362 ENTPD2Q9Y5L3 495 aa6.22□□□□□ -1.41
CSDE1-205ENST00000438362 F5H0A9 414 aaPredicted RBP6.22□□□□□ -1.41
CSDE1-205ENST00000438362 TNFRSF10AO00220 468 aa6.22□□□□□ -1.41
CSDE1-205ENST00000438362 NPC1O15118 1278 aa6.22□□□□□ -1.41
CSDE1-205ENST00000438362 TLX3O43711 291 aaPredicted RBP6.22□□□□□ -1.41
CSDE1-205ENST00000438362 PIP5K1CO60331 668 aa6.22□□□□□ -1.41
CSDE1-205ENST00000438362 PRAMEF2O60811 474 aa6.22□□□□□ -1.41
CSDE1-205ENST00000438362 SC5DO75845 299 aa6.22□□□□□ -1.41
CSDE1-205ENST00000438362 OLFM2O95897 454 aa6.22□□□□□ -1.41
CSDE1-205ENST00000438362 HBQ1P09105 142 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms