RNA–Protein interactions for RNA: ENST00000437600.8

CUX1-206, Transcript of cut like homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CUX1, Length 3,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-206ENST00000437600 RALGAPA1Q6GYQ0 2036 aa8.75□□□□□ -1.01
CUX1-206ENST00000437600 CNOT1A5YKK6 2376 aaKnown RBP8.75□□□□□ -1.01
CUX1-206ENST00000437600 ZNF292O60281 2723 aa8.75□□□□□ -1.01
CUX1-206ENST00000437600 TGFBR3LH3BV60 316 aa8.75□□□□□ -1.01
CUX1-206ENST00000437600 HPGDSO60760 199 aa8.75□□□□□ -1.01
CUX1-206ENST00000437600 SMIM10L1P0DMW3 83 aa8.75□□□□□ -1.01
CUX1-206ENST00000437600 CD27P26842 260 aa8.75□□□□□ -1.01
CUX1-206ENST00000437600 IFNA8P32881 189 aa8.75□□□□□ -1.01
CUX1-206ENST00000437600 EMDP50402 254 aa8.75□□□□□ -1.01
CUX1-206ENST00000437600 BLKP51451 505 aa8.75□□□□□ -1.01
CUX1-206ENST00000437600 RAB25P57735 213 aa8.75□□□□□ -1.01
CUX1-206ENST00000437600 ZNF181Q2M3W8 571 aa8.75□□□□□ -1.01
CUX1-206ENST00000437600 KLHL22Q53GT1 634 aa8.75□□□□□ -1.01
CUX1-206ENST00000437600 ZNF628Q5EBL2 1059 aa8.75□□□□□ -1.01
CUX1-206ENST00000437600 RSBN1Q5VWQ0 802 aaPredicted RBP8.75□□□□□ -1.01
CUX1-206ENST00000437600 LYPD4Q6UWN0 246 aa8.75□□□□□ -1.01
CUX1-206ENST00000437600 RASSF6Q6ZTQ3 369 aa8.75□□□□□ -1.01
CUX1-206ENST00000437600 PRSS58Q8IYP2 241 aa8.75□□□□□ -1.01
CUX1-206ENST00000437600 ATP6V1C2Q8NEY4 427 aa8.75□□□□□ -1.01
CUX1-206ENST00000437600 OR7G1Q8NGA0 311 aa8.75□□□□□ -1.01
CUX1-206ENST00000437600 SFXN5Q8TD22 340 aa8.75□□□□□ -1.01
CUX1-206ENST00000437600 SMIM10Q96HG1 83 aa8.75□□□□□ -1.01
CUX1-206ENST00000437600 SMOC1Q9H4F8 434 aa8.75□□□□□ -1.01
CUX1-206ENST00000437600 MOV10Q9HCE1 1003 aaKnown RBP8.75□□□□□ -1.01
CUX1-206ENST00000437600 SOHLH2Q9NX45 425 aa8.75□□□□□ -1.01
CUX1-206ENST00000437600 DCAF16Q9NXF7 216 aa8.75□□□□□ -1.01
CUX1-206ENST00000437600 CCDC59Q9P031 241 aaKnown RBP8.75□□□□□ -1.01
CUX1-206ENST00000437600 GRIP1Q9Y3R0 1128 aa8.75□□□□□ -1.01
CUX1-206ENST00000437600 ZFHX4Q86UP3 3567 aa8.75□□□□□ -1.01
CUX1-206ENST00000437600 ZNF318Q5VUA4 2279 aa8.75□□□□□ -1.01
CUX1-206ENST00000437600 M0R296 226 aa8.75□□□□□ -1.01
CUX1-206ENST00000437600 LAMTOR5O43504 91 aa8.75□□□□□ -1.01
CUX1-206ENST00000437600 CHST10O43529 356 aa8.75□□□□□ -1.01
CUX1-206ENST00000437600 IDH3BO43837 385 aa8.75□□□□□ -1.01
CUX1-206ENST00000437600 STX11O75558 287 aa8.75□□□□□ -1.01
CUX1-206ENST00000437600 GPR75O95800 540 aa8.75□□□□□ -1.01
CUX1-206ENST00000437600 IGKV1D-16P01601 117 aa8.75□□□□□ -1.01
CUX1-206ENST00000437600 NGFRP08138 427 aa8.75□□□□□ -1.01
CUX1-206ENST00000437600 GSTM3P21266 225 aa8.75□□□□□ -1.01
CUX1-206ENST00000437600 ZNF155Q12901 538 aaPredicted RBP8.75□□□□□ -1.01
CUX1-206ENST00000437600 DUSP8Q13202 625 aa8.75□□□□□ -1.01
CUX1-206ENST00000437600 ZNF267Q14586 743 aaPredicted RBP8.75□□□□□ -1.01
CUX1-206ENST00000437600 CEBPEQ15744 281 aa8.75□□□□□ -1.01
CUX1-206ENST00000437600 PRICKLE4Q2TBC4 344 aa8.75□□□□□ -1.01
CUX1-206ENST00000437600 ARHGAP11BQ3KRB8 267 aa8.75□□□□□ -1.01
CUX1-206ENST00000437600 PYDC2Q56P42 97 aa8.75□□□□□ -1.01
CUX1-206ENST00000437600 AADACL4Q5VUY2 407 aa8.75□□□□□ -1.01
CUX1-206ENST00000437600 HEPHL1Q6MZM0 1159 aa8.75□□□□□ -1.01
CUX1-206ENST00000437600 CD300LDQ6UXZ3 194 aa8.75□□□□□ -1.01
CUX1-206ENST00000437600 ZNF620Q6ZNG0 422 aa8.75□□□□□ -1.01
CUX1-206ENST00000437600 MBOAT2Q6ZWT7 520 aa8.75□□□□□ -1.01
CUX1-206ENST00000437600 ABHD13Q7L211 337 aa8.75□□□□□ -1.01
CUX1-206ENST00000437600 CXXC5Q7LFL8 322 aaKnown RBP8.75□□□□□ -1.01
CUX1-206ENST00000437600 RFLNBQ8N5W9 214 aa8.75□□□□□ -1.01
CUX1-206ENST00000437600 OR2T33Q8NG76 320 aa8.75□□□□□ -1.01
CUX1-206ENST00000437600 OR13C5Q8NGS8 318 aa8.75□□□□□ -1.01
CUX1-206ENST00000437600 OR2I1PQ8NGU4 316 aa8.75□□□□□ -1.01
CUX1-206ENST00000437600 TXNDC15Q96J42 360 aa8.75□□□□□ -1.01
CUX1-206ENST00000437600 KCTD7Q96MP8 289 aa8.75□□□□□ -1.01
CUX1-206ENST00000437600 LYARQ9NX58 379 aaKnown RBP8.75□□□□□ -1.01
CUX1-206ENST00000437600 SF3B6Q9Y3B4 125 aaKnown RBP8.75□□□□□ -1.01
CUX1-206ENST00000437600 LOC400499M0QZD8 3231 aa8.74□□□□□ -1.01
CUX1-206ENST00000437600 TNFSF14O43557 240 aa8.74□□□□□ -1.01
CUX1-206ENST00000437600 CPEP16870 476 aa8.74□□□□□ -1.01
CUX1-206ENST00000437600 BMP7P18075 431 aa8.74□□□□□ -1.01
CUX1-206ENST00000437600 PRKAR1BP31321 381 aa8.74□□□□□ -1.01
CUX1-206ENST00000437600 MAGEB1P43366 347 aa8.74□□□□□ -1.01
CUX1-206ENST00000437600 CTBP2P56545 445 aa8.74□□□□□ -1.01
CUX1-206ENST00000437600 EEF1A1P68104 462 aaKnown RBP8.74□□□□□ -1.01
CUX1-206ENST00000437600 PSPHP78330 225 aa8.74□□□□□ -1.01
CUX1-206ENST00000437600 SLC3A1Q07837 685 aa8.74□□□□□ -1.01
CUX1-206ENST00000437600 RAB40BQ12829 278 aa8.74□□□□□ -1.01
CUX1-206ENST00000437600 PGGHGQ32M88 737 aa8.74□□□□□ -1.01
CUX1-206ENST00000437600 C4orf46Q504U0 113 aa8.74□□□□□ -1.01
CUX1-206ENST00000437600 MARCH9Q86YJ5 346 aa8.74□□□□□ -1.01
CUX1-206ENST00000437600 OR4C3Q8NH37 302 aa8.74□□□□□ -1.01
CUX1-206ENST00000437600 TMEM239Q8WW34 195 aa8.74□□□□□ -1.01
CUX1-206ENST00000437600 SLC25A46Q96AG3 418 aa8.74□□□□□ -1.01
CUX1-206ENST00000437600 ANKRD9Q96BM1 317 aaPredicted RBP8.74□□□□□ -1.01
CUX1-206ENST00000437600 BPIFA2Q96DR5 249 aa8.74□□□□□ -1.01
CUX1-206ENST00000437600 RBM18Q96H35 190 aaKnown RBP8.74□□□□□ -1.01
CUX1-206ENST00000437600 ARHGAP9Q9BRR9 750 aa8.74□□□□□ -1.01
CUX1-206ENST00000437600 FN3KQ9H479 309 aa8.74□□□□□ -1.01
CUX1-206ENST00000437600 PIGUQ9H490 435 aa8.74□□□□□ -1.01
CUX1-206ENST00000437600 LRIT1Q9P2V4 623 aa8.74□□□□□ -1.01
CUX1-206ENST00000437600 TNFRSF10DQ9UBN6 386 aa8.74□□□□□ -1.01
CUX1-206ENST00000437600 C19orf53Q9UNZ5 99 aaPredicted RBP8.74□□□□□ -1.01
CUX1-206ENST00000437600 TMEM184BQ9Y519 407 aaPredicted RBP8.74□□□□□ -1.01
CUX1-206ENST00000437600 A0A1W2PR77 199 aa8.74□□□□□ -1.01
CUX1-206ENST00000437600 CDC14CA4D256 554 aa8.74□□□□□ -1.01
CUX1-206ENST00000437600 PATE3B3GLJ2 98 aa8.74□□□□□ -1.01
CUX1-206ENST00000437600 C10orf142B7Z368 130 aa8.74□□□□□ -1.01
CUX1-206ENST00000437600 IL7P13232 177 aa8.74□□□□□ -1.01
CUX1-206ENST00000437600 IFNGR2P38484 337 aa8.74□□□□□ -1.01
CUX1-206ENST00000437600 RFX2P48378 723 aa8.74□□□□□ -1.01
CUX1-206ENST00000437600 PSG6Q00889 435 aa8.74□□□□□ -1.01
CUX1-206ENST00000437600 E2F1Q01094 437 aa8.74□□□□□ -1.01
CUX1-206ENST00000437600 TEKQ02763 1124 aa8.74□□□□□ -1.01
CUX1-206ENST00000437600 PLK5Q496M5 336 aa8.74□□□□□ -1.01
CUX1-206ENST00000437600 MTFR2Q6P444 385 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms