RNA–Protein interactions for RNA: ENST00000437003.3

TMEM116-202, Transcript of transmembrane protein 116, humanhuman

Gene TMEM116, Length 2,761 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-202ENST00000437003 EDDM13A0A1B0GTR0 161 aa11.5□□□□□ -0.57
TMEM116-202ENST00000437003 PGRMC2O15173 223 aa11.5□□□□□ -0.57
TMEM116-202ENST00000437003 SURF4O15260 269 aa11.5□□□□□ -0.57
TMEM116-202ENST00000437003 VEGFDO43915 354 aa11.5□□□□□ -0.57
TMEM116-202ENST00000437003 RB1P06400 928 aa11.5□□□□□ -0.57
TMEM116-202ENST00000437003 PAICSP22234 425 aaKnown RBP11.5□□□□□ -0.57
TMEM116-202ENST00000437003 ZNF750Q32MQ0 723 aa11.5□□□□□ -0.57
TMEM116-202ENST00000437003 TMEM255AQ5JRV8 349 aa11.5□□□□□ -0.57
TMEM116-202ENST00000437003 TMEM99Q8N816 258 aa11.5□□□□□ -0.57
TMEM116-202ENST00000437003 PPP1R16AQ96I34 528 aa11.5□□□□□ -0.57
TMEM116-202ENST00000437003 FAIM2Q9BWQ8 316 aa11.5□□□□□ -0.57
TMEM116-202ENST00000437003 WASH6PQ9NQA3 447 aa11.5□□□□□ -0.57
TMEM116-202ENST00000437003 PCDHB16Q9NRJ7 776 aa11.5□□□□□ -0.57
TMEM116-202ENST00000437003 BABAM2Q9NXR7 383 aa11.5□□□□□ -0.57
TMEM116-202ENST00000437003 CXXC1Q9P0U4 656 aaPredicted RBP11.5□□□□□ -0.57
TMEM116-202ENST00000437003 COPS3Q9UNS2 423 aa11.5□□□□□ -0.57
TMEM116-202ENST00000437003 LIPT1Q9Y234 373 aa11.5□□□□□ -0.57
TMEM116-202ENST00000437003 KRBOX1C9JBD0 128 aa11.49□□□□□ -0.57
TMEM116-202ENST00000437003 LRRN3E7EW58 273 aa11.49□□□□□ -0.57
TMEM116-202ENST00000437003 SCAMP1O15126 338 aa11.49□□□□□ -0.57
TMEM116-202ENST00000437003 REM1O75628 298 aa11.49□□□□□ -0.57
TMEM116-202ENST00000437003 SIX6O95475 246 aa11.49□□□□□ -0.57
TMEM116-202ENST00000437003 MRPL3P09001 348 aaKnown RBP11.49□□□□□ -0.57
TMEM116-202ENST00000437003 C8orf89P0DMQ9 161 aa11.49□□□□□ -0.57
TMEM116-202ENST00000437003 OC90Q02509 493 aaPredicted RBP11.49□□□□□ -0.57
TMEM116-202ENST00000437003 ETFDHQ16134 617 aa11.49□□□□□ -0.57
TMEM116-202ENST00000437003 HSD17B12Q53GQ0 312 aa11.49□□□□□ -0.57
TMEM116-202ENST00000437003 NDUFAF5Q5TEU4 345 aa11.49□□□□□ -0.57
TMEM116-202ENST00000437003 OR5M10Q6IEU7 315 aa11.49□□□□□ -0.57
TMEM116-202ENST00000437003 FAAP20Q6NZ36 180 aa11.49□□□□□ -0.57
TMEM116-202ENST00000437003 CDC73Q6P1J9 531 aa11.49□□□□□ -0.57
TMEM116-202ENST00000437003 DCUN1D3Q8IWE4 304 aa11.49□□□□□ -0.57
TMEM116-202ENST00000437003 UXS1Q8NBZ7 420 aa11.49□□□□□ -0.57
TMEM116-202ENST00000437003 OR5W2Q8NH69 310 aa11.49□□□□□ -0.57
TMEM116-202ENST00000437003 SPPL3Q8TCT6 385 aa11.49□□□□□ -0.57
TMEM116-202ENST00000437003 RSPRY1Q96DX4 576 aa11.49□□□□□ -0.57
TMEM116-202ENST00000437003 SLC35G5Q96KT7 338 aa11.49□□□□□ -0.57
TMEM116-202ENST00000437003 LGR4Q9BXB1 951 aa11.49□□□□□ -0.57
TMEM116-202ENST00000437003 LRRN3Q9H3W5 708 aa11.49□□□□□ -0.57
TMEM116-202ENST00000437003 XKR8Q9H6D3 395 aa11.49□□□□□ -0.57
TMEM116-202ENST00000437003 WDR26Q9H7D7 661 aa11.49□□□□□ -0.57
TMEM116-202ENST00000437003 EQTNQ9NQ60 294 aa11.49□□□□□ -0.57
TMEM116-202ENST00000437003 LHX9Q9NQ69 397 aa11.49□□□□□ -0.57
TMEM116-202ENST00000437003 DEC1Q9P2X7 70 aa11.49□□□□□ -0.57
TMEM116-202ENST00000437003 RCE1Q9Y256 329 aa11.49□□□□□ -0.57
TMEM116-202ENST00000437003 A0A0G2JK05 382 aa11.49□□□□□ -0.57
TMEM116-202ENST00000437003 OTOL1A6NHN0 477 aaPredicted RBP11.49□□□□□ -0.57
TMEM116-202ENST00000437003 ANXA2P2A6NMY6 339 aa11.49□□□□□ -0.57
TMEM116-202ENST00000437003 ARPC1BO15143 372 aaKnown RBP11.49□□□□□ -0.57
TMEM116-202ENST00000437003 ARPC5O15511 151 aa11.49□□□□□ -0.57
TMEM116-202ENST00000437003 NFATC1O95644 943 aa11.49□□□□□ -0.57
TMEM116-202ENST00000437003 CBX7O95931 251 aa11.49□□□□□ -0.57
TMEM116-202ENST00000437003 IGHA1P01876 353 aa11.49□□□□□ -0.57
TMEM116-202ENST00000437003 HNRNPA1P09651 372 aaKnown RBP eCLIP11.49□□□□□ -0.57
TMEM116-202ENST00000437003 PPP2R1BP30154 601 aa11.49□□□□□ -0.57
TMEM116-202ENST00000437003 GDNFP39905 211 aa11.49□□□□□ -0.57
TMEM116-202ENST00000437003 RPL35P42766 123 aaKnown RBP11.49□□□□□ -0.57
TMEM116-202ENST00000437003 SSR2P43308 183 aa11.49□□□□□ -0.57
TMEM116-202ENST00000437003 NCBP2P52298 156 aaKnown RBP eCLIP11.49□□□□□ -0.57
TMEM116-202ENST00000437003 ACY1Q03154 408 aa11.49□□□□□ -0.57
TMEM116-202ENST00000437003 MELKQ14680 651 aa11.49□□□□□ -0.57
TMEM116-202ENST00000437003 LASP1Q14847 261 aaKnown RBP11.49□□□□□ -0.57
TMEM116-202ENST00000437003 NHLRC1Q6VVB1 395 aa11.49□□□□□ -0.57
TMEM116-202ENST00000437003 OVCH2Q7RTZ1 564 aa11.49□□□□□ -0.57
TMEM116-202ENST00000437003 NUDT13Q86X67 352 aa11.49□□□□□ -0.57
TMEM116-202ENST00000437003 C17orf47Q8NEP4 570 aa11.49□□□□□ -0.57
TMEM116-202ENST00000437003 GNPDA2Q8TDQ7 276 aa11.49□□□□□ -0.57
TMEM116-202ENST00000437003 CXorf40AQ8TE69 158 aa11.49□□□□□ -0.57
TMEM116-202ENST00000437003 ARMC5Q96C12 935 aa11.49□□□□□ -0.57
TMEM116-202ENST00000437003 IL23AQ9NPF7 189 aa11.49□□□□□ -0.57
TMEM116-202ENST00000437003 SEMA4GQ9NTN9 838 aa11.49□□□□□ -0.57
TMEM116-202ENST00000437003 ZNF69Q9UC07 566 aa11.49□□□□□ -0.57
TMEM116-202ENST00000437003 GPR160Q9UJ42 338 aa11.49□□□□□ -0.57
TMEM116-202ENST00000437003 NDUFS4O43181 175 aa11.48□□□□□ -0.57
TMEM116-202ENST00000437003 LCMT2O60294 686 aaKnown RBP11.48□□□□□ -0.57
TMEM116-202ENST00000437003 UBL3O95164 117 aa11.48□□□□□ -0.57
TMEM116-202ENST00000437003 PRKAR1BP31321 381 aa11.48□□□□□ -0.57
TMEM116-202ENST00000437003 RAD52P43351 418 aa11.48□□□□□ -0.57
TMEM116-202ENST00000437003 POLR2GP62487 172 aaKnown RBP eCLIP11.48□□□□□ -0.57
TMEM116-202ENST00000437003 TSPAN31Q12999 210 aa11.48□□□□□ -0.57
TMEM116-202ENST00000437003 HTR4Q13639 388 aa11.48□□□□□ -0.57
TMEM116-202ENST00000437003 TCEA2Q15560 299 aa11.48□□□□□ -0.57
TMEM116-202ENST00000437003 ERN2Q76MJ5 926 aaKnown RBP11.48□□□□□ -0.57
TMEM116-202ENST00000437003 NKAIN4Q8IVV8 208 aa11.48□□□□□ -0.57
TMEM116-202ENST00000437003 ETFBKMTQ8IXQ9 262 aa11.48□□□□□ -0.57
TMEM116-202ENST00000437003 ACBD7Q8N6N7 88 aa11.48□□□□□ -0.57
TMEM116-202ENST00000437003 OR11G2Q8NGC1 345 aa11.48□□□□□ -0.57
TMEM116-202ENST00000437003 KCTD12Q96CX2 325 aaKnown RBP11.48□□□□□ -0.57
TMEM116-202ENST00000437003 DMRTA2Q96SC8 542 aa11.48□□□□□ -0.57
TMEM116-202ENST00000437003 TRMT61BQ9BVS5 477 aaKnown RBP11.48□□□□□ -0.57
TMEM116-202ENST00000437003 GLIPR2Q9H4G4 154 aa11.48□□□□□ -0.57
TMEM116-202ENST00000437003 GPR55Q9Y2T6 319 aaPredicted RBP11.48□□□□□ -0.57
TMEM116-202ENST00000437003 NPTNQ9Y639 398 aa11.48□□□□□ -0.57
TMEM116-202ENST00000437003 TRPM6Q9BX84 2022 aa11.48□□□□□ -0.57
TMEM116-202ENST00000437003 KIAA0355O15063 1070 aa11.48□□□□□ -0.57
TMEM116-202ENST00000437003 CHRM4P08173 479 aa11.48□□□□□ -0.57
TMEM116-202ENST00000437003 GAAP10253 952 aa11.48□□□□□ -0.57
TMEM116-202ENST00000437003 UGT2B7P16662 529 aa11.48□□□□□ -0.57
TMEM116-202ENST00000437003 ATF1P18846 271 aa11.48□□□□□ -0.57
TMEM116-202ENST00000437003 HTR1FP30939 366 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms