RNA–Protein interactions for RNA: ENST00000427724.6

TCOF1-204, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5

Gene TCOF1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-204ENST00000427724 GABARAPO95166 117 aa9.91□□□□□ -0.82
TCOF1-204ENST00000427724 ZNF806P0C7X5 589 aa9.91□□□□□ -0.82
TCOF1-204ENST00000427724 ITGAMP11215 1152 aa9.91□□□□□ -0.82
TCOF1-204ENST00000427724 CPMP14384 443 aa9.91□□□□□ -0.82
TCOF1-204ENST00000427724 ZNF84P51523 738 aa9.91□□□□□ -0.82
TCOF1-204ENST00000427724 CRISP1P54107 249 aa9.91□□□□□ -0.82
TCOF1-204ENST00000427724 DEFA5Q01523 94 aa9.91□□□□□ -0.82
TCOF1-204ENST00000427724 PUDPQ08623 228 aa9.91□□□□□ -0.82
TCOF1-204ENST00000427724 EXT1Q16394 746 aa9.91□□□□□ -0.82
TCOF1-204ENST00000427724 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.91□□□□□ -0.82
TCOF1-204ENST00000427724 CDKL4Q5MAI5 379 aa9.91□□□□□ -0.82
TCOF1-204ENST00000427724 ZNF362Q5T0B9 420 aaPredicted RBP9.91□□□□□ -0.82
TCOF1-204ENST00000427724 CYHR1Q6ZMK1 362 aa9.91□□□□□ -0.82
TCOF1-204ENST00000427724 TMEM179BQ7Z7N9 219 aa9.91□□□□□ -0.82
TCOF1-204ENST00000427724 PRR7Q8TB68 274 aa9.91□□□□□ -0.82
TCOF1-204ENST00000427724 UFD1Q92890 307 aa9.91□□□□□ -0.82
TCOF1-204ENST00000427724 KCTD7Q96MP8 289 aa9.91□□□□□ -0.82
TCOF1-204ENST00000427724 OR4K3Q96R72 315 aa9.91□□□□□ -0.82
TCOF1-204ENST00000427724 TSSK6Q9BXA6 273 aa9.91□□□□□ -0.82
TCOF1-204ENST00000427724 HOXD1Q9GZZ0 328 aa9.91□□□□□ -0.82
TCOF1-204ENST00000427724 PLSCR3Q9NRY6 295 aa9.91□□□□□ -0.82
TCOF1-204ENST00000427724 P4HTMQ9NXG6 502 aa9.91□□□□□ -0.82
TCOF1-204ENST00000427724 ICKQ9UPZ9 632 aa9.91□□□□□ -0.82
TCOF1-204ENST00000427724 CMAHPQ9Y471 501 aa9.91□□□□□ -0.82
TCOF1-204ENST00000427724 MYOFQ9NZM1 2061 aa9.91□□□□□ -0.82
TCOF1-204ENST00000427724 D6RAR5 112 aa9.9□□□□□ -0.82
TCOF1-204ENST00000427724 DLGAP1O14490 977 aa9.9□□□□□ -0.82
TCOF1-204ENST00000427724 TSPAN12O95859 305 aa9.9□□□□□ -0.82
TCOF1-204ENST00000427724 SERPINA3P01011 423 aa9.9□□□□□ -0.82
TCOF1-204ENST00000427724 HSD11B1P28845 292 aa9.9□□□□□ -0.82
TCOF1-204ENST00000427724 TGFBR3Q03167 851 aa9.9□□□□□ -0.82
TCOF1-204ENST00000427724 CDK10Q15131 360 aa9.9□□□□□ -0.82
TCOF1-204ENST00000427724 PRAMEF8Q5VWM4 474 aa9.9□□□□□ -0.82
TCOF1-204ENST00000427724 PRAMEF7Q5VXH5 474 aa9.9□□□□□ -0.82
TCOF1-204ENST00000427724 C18orf63Q68DL7 685 aa9.9□□□□□ -0.82
TCOF1-204ENST00000427724 APOBEC4Q8WW27 367 aaKnown RBP9.9□□□□□ -0.82
TCOF1-204ENST00000427724 TMEM80Q96HE8 168 aa9.9□□□□□ -0.82
TCOF1-204ENST00000427724 MBOAT4Q96T53 435 aa9.9□□□□□ -0.82
TCOF1-204ENST00000427724 BCL2L14Q9BZR8 327 aa9.9□□□□□ -0.82
TCOF1-204ENST00000427724 LAMA3Q16787 3333 aa9.9□□□□□ -0.82
TCOF1-204ENST00000427724 A0A1W2PQ09 198 aa9.9□□□□□ -0.82
TCOF1-204ENST00000427724 ERCC1P07992 297 aaPredicted RBP9.9□□□□□ -0.82
TCOF1-204ENST00000427724 JUNBP17275 347 aaPredicted RBP9.9□□□□□ -0.82
TCOF1-204ENST00000427724 MAP2K3P46734 347 aa9.9□□□□□ -0.82
TCOF1-204ENST00000427724 SELENOWP63302 87 aa9.9□□□□□ -0.82
TCOF1-204ENST00000427724 ZMYND11Q15326 602 aa9.9□□□□□ -0.82
TCOF1-204ENST00000427724 SPHARQ15513 63 aa9.9□□□□□ -0.82
TCOF1-204ENST00000427724 NKG7Q16617 165 aa9.9□□□□□ -0.82
TCOF1-204ENST00000427724 CBLL1Q75N03 491 aa9.9□□□□□ -0.82
TCOF1-204ENST00000427724 FYTTD1Q96QD9 318 aaKnown RBP9.9□□□□□ -0.82
TCOF1-204ENST00000427724 RHNO1Q9BSD3 238 aa9.9□□□□□ -0.82
TCOF1-204ENST00000427724 GRHPRQ9UBQ7 328 aa9.9□□□□□ -0.82
TCOF1-204ENST00000427724 SLC35F4A4IF30 521 aa9.9□□□□□ -0.82
TCOF1-204ENST00000427724 ZNF821O75541 412 aaPredicted RBP9.9□□□□□ -0.82
TCOF1-204ENST00000427724 PRKRAO75569 313 aaKnown RBP9.9□□□□□ -0.82
TCOF1-204ENST00000427724 AIFM1O95831 613 aa9.9□□□□□ -0.82
TCOF1-204ENST00000427724 AK1P00568 194 aa9.9□□□□□ -0.82
TCOF1-204ENST00000427724 HK1P19367 917 aa9.9□□□□□ -0.82
TCOF1-204ENST00000427724 OR3A3P47888 321 aa9.9□□□□□ -0.82
TCOF1-204ENST00000427724 GP2P55259 537 aaKnown RBP9.9□□□□□ -0.82
TCOF1-204ENST00000427724 GINS1Q14691 196 aa9.9□□□□□ -0.82
TCOF1-204ENST00000427724 RPS26P11Q5JNZ5 115 aaPredicted RBP9.9□□□□□ -0.82
TCOF1-204ENST00000427724 VHLLQ6RSH7 139 aa9.9□□□□□ -0.82
TCOF1-204ENST00000427724 RIMKLAQ8IXN7 391 aa9.9□□□□□ -0.82
TCOF1-204ENST00000427724 COQ8BQ96D53 544 aa9.9□□□□□ -0.82
TCOF1-204ENST00000427724 ECHDC3Q96DC8 303 aa9.9□□□□□ -0.82
TCOF1-204ENST00000427724 TMEM19Q96HH6 336 aa9.9□□□□□ -0.82
TCOF1-204ENST00000427724 TMED9Q9BVK6 235 aa9.9□□□□□ -0.82
TCOF1-204ENST00000427724 MND1Q9BWT6 205 aa9.9□□□□□ -0.82
TCOF1-204ENST00000427724 POLDIP3Q9BY77 421 aaKnown RBP9.9□□□□□ -0.82
TCOF1-204ENST00000427724 ACTRT3Q9BYD9 372 aa9.9□□□□□ -0.82
TCOF1-204ENST00000427724 TMEM138Q9NPI0 162 aa9.9□□□□□ -0.82
TCOF1-204ENST00000427724 NANSQ9NR45 359 aa9.9□□□□□ -0.82
TCOF1-204ENST00000427724 MLXQ9UH92 298 aa9.9□□□□□ -0.82
TCOF1-204ENST00000427724 SDK2Q58EX2 2172 aa9.9□□□□□ -0.83
TCOF1-204ENST00000427724 H3BSH0 61 aa9.9□□□□□ -0.83
TCOF1-204ENST00000427724 TRIM3O75382 744 aaPredicted RBP9.9□□□□□ -0.83
TCOF1-204ENST00000427724 FOLR1P15328 257 aa9.9□□□□□ -0.83
TCOF1-204ENST00000427724 NPPBP16860 134 aa9.9□□□□□ -0.83
TCOF1-204ENST00000427724 ACVR2AP27037 513 aa9.9□□□□□ -0.83
TCOF1-204ENST00000427724 DPP4P27487 766 aa9.9□□□□□ -0.83
TCOF1-204ENST00000427724 FADDQ13158 208 aa9.9□□□□□ -0.83
TCOF1-204ENST00000427724 ZNF750Q32MQ0 723 aa9.9□□□□□ -0.83
TCOF1-204ENST00000427724 TMEM176BQ3YBM2 270 aaPredicted RBP9.9□□□□□ -0.83
TCOF1-204ENST00000427724 PAMR1Q6UXH9 720 aa9.9□□□□□ -0.83
TCOF1-204ENST00000427724 CXXC5Q7LFL8 322 aaKnown RBP9.9□□□□□ -0.83
TCOF1-204ENST00000427724 ZNF367Q7RTV3 350 aa9.9□□□□□ -0.83
TCOF1-204ENST00000427724 TRIM46Q7Z4K8 759 aa9.9□□□□□ -0.83
TCOF1-204ENST00000427724 ABI3BPQ7Z7G0 1075 aa9.9□□□□□ -0.83
TCOF1-204ENST00000427724 KMT5CQ86Y97 462 aa9.9□□□□□ -0.83
TCOF1-204ENST00000427724 TSEN15Q8WW01 171 aaKnown RBP9.9□□□□□ -0.83
TCOF1-204ENST00000427724 TSLPQ969D9 159 aa9.9□□□□□ -0.83
TCOF1-204ENST00000427724 RFKQ969G6 155 aa9.9□□□□□ -0.83
TCOF1-204ENST00000427724 ZNF300Q96RE9 604 aaPredicted RBP9.9□□□□□ -0.83
TCOF1-204ENST00000427724 BCL7BQ9BQE9 202 aa9.9□□□□□ -0.83
TCOF1-204ENST00000427724 PRDM9Q9NQV7 894 aa9.9□□□□□ -0.83
TCOF1-204ENST00000427724 TAS2R16Q9NYV7 291 aa9.9□□□□□ -0.83
TCOF1-204ENST00000427724 ALPK2Q86TB3 2170 aa9.9□□□□□ -0.83
TCOF1-204ENST00000427724 IGHV5-51A0A0C4DH38 117 aa9.89□□□□□ -0.83
TCOF1-204ENST00000427724 J3KTA2 159 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms