RNA–Protein interactions for RNA: ENST00000426253.5

NIF3L1-207, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-207ENST00000426253 C15orf38-AP3S2A0A0A6YYH1 394 aa5.59□□□□□ -1.51
NIF3L1-207ENST00000426253 WDR91A4D1P6 747 aa5.59□□□□□ -1.51
NIF3L1-207ENST00000426253 FRG2CA6NGY1 282 aa5.59□□□□□ -1.51
NIF3L1-207ENST00000426253 OR6C70A6NIJ9 312 aa5.59□□□□□ -1.51
NIF3L1-207ENST00000426253 LRRC3CA6NJW4 275 aa5.59□□□□□ -1.51
NIF3L1-207ENST00000426253 AHRRA9YTQ3 701 aa5.59□□□□□ -1.51
NIF3L1-207ENST00000426253 NPIPB8E9PQR5 432 aa5.59□□□□□ -1.51
NIF3L1-207ENST00000426253 PLOD2O00469 737 aa5.59□□□□□ -1.51
NIF3L1-207ENST00000426253 RGS16O15492 202 aaPredicted RBP5.59□□□□□ -1.51
NIF3L1-207ENST00000426253 TYROBPO43914 113 aa5.59□□□□□ -1.51
NIF3L1-207ENST00000426253 PIP5K1CO60331 668 aa5.59□□□□□ -1.51
NIF3L1-207ENST00000426253 TSPAN2O60636 221 aa5.59□□□□□ -1.51
NIF3L1-207ENST00000426253 WDR1O75083 606 aa5.59□□□□□ -1.51
NIF3L1-207ENST00000426253 PEX11AO75192 247 aa5.59□□□□□ -1.51
NIF3L1-207ENST00000426253 UGT2B11O75310 529 aa5.59□□□□□ -1.51
NIF3L1-207ENST00000426253 ERN1O75460 977 aaKnown RBP5.59□□□□□ -1.51
NIF3L1-207ENST00000426253 CBR3O75828 277 aa5.59□□□□□ -1.51
NIF3L1-207ENST00000426253 RAF1P04049 648 aa5.59□□□□□ -1.51
NIF3L1-207ENST00000426253 HPNP05981 417 aa5.59□□□□□ -1.51
NIF3L1-207ENST00000426253 TUBBP07437 444 aa5.59□□□□□ -1.51
NIF3L1-207ENST00000426253 CHRNGP07510 517 aa5.59□□□□□ -1.51
NIF3L1-207ENST00000426253 BPGMP07738 259 aa5.59□□□□□ -1.51
NIF3L1-207ENST00000426253 CT45A8P0DMV1 189 aa5.59□□□□□ -1.51
NIF3L1-207ENST00000426253 CT45A9P0DMV2 189 aa5.59□□□□□ -1.51
NIF3L1-207ENST00000426253 GABRA1P14867 456 aa5.59□□□□□ -1.51
NIF3L1-207ENST00000426253 KRT20P35900 424 aa5.59□□□□□ -1.51
NIF3L1-207ENST00000426253 PNLIPRP2P54317 469 aa5.59□□□□□ -1.51
NIF3L1-207ENST00000426253 NUP107P57740 925 aa5.59□□□□□ -1.51
NIF3L1-207ENST00000426253 SNTA1Q13424 505 aa5.59□□□□□ -1.51
NIF3L1-207ENST00000426253 GAB1Q13480 694 aa5.59□□□□□ -1.51
NIF3L1-207ENST00000426253 KRTAP24-1Q3LI83 254 aa5.59□□□□□ -1.51
NIF3L1-207ENST00000426253 KRT71Q3SY84 523 aa5.59□□□□□ -1.51
NIF3L1-207ENST00000426253 GALNTL6Q49A17 601 aa5.59□□□□□ -1.51
NIF3L1-207ENST00000426253 CT45A2Q5DJT8 189 aa5.59□□□□□ -1.51
NIF3L1-207ENST00000426253 SH2D4BQ5SQS7 431 aa5.59□□□□□ -1.51
NIF3L1-207ENST00000426253 FNDC7Q5VTL7 733 aa5.59□□□□□ -1.51
NIF3L1-207ENST00000426253 SHEQ5VZ18 495 aa5.59□□□□□ -1.51
NIF3L1-207ENST00000426253 RTL6Q6ICC9 239 aa5.59□□□□□ -1.51
NIF3L1-207ENST00000426253 TMEM81Q6P7N7 255 aa5.59□□□□□ -1.51
NIF3L1-207ENST00000426253 TMEM107Q6UX40 140 aa5.59□□□□□ -1.51
NIF3L1-207ENST00000426253 ANGPTL8Q6UXH0 198 aa5.59□□□□□ -1.51
NIF3L1-207ENST00000426253 B3GNT6Q6ZMB0 384 aa5.59□□□□□ -1.51
NIF3L1-207ENST00000426253 ZCCHC23Q6ZST2 131 aa5.59□□□□□ -1.51
NIF3L1-207ENST00000426253 LCNL1Q6ZST4 164 aa5.59□□□□□ -1.51
NIF3L1-207ENST00000426253 IKBIPQ70UQ0 350 aa5.59□□□□□ -1.51
NIF3L1-207ENST00000426253 EXOC3L1Q86VI1 746 aa5.59□□□□□ -1.51
NIF3L1-207ENST00000426253 CCDC71Q8IV32 467 aaPredicted RBP5.59□□□□□ -1.51
NIF3L1-207ENST00000426253 SLC44A2Q8IWA5 706 aaPredicted RBP5.59□□□□□ -1.51
NIF3L1-207ENST00000426253 RPRMLQ8N4K4 120 aa5.59□□□□□ -1.51
NIF3L1-207ENST00000426253 MREGQ8N565 214 aa5.59□□□□□ -1.51
NIF3L1-207ENST00000426253 OR4N2Q8NGD1 307 aa5.59□□□□□ -1.51
NIF3L1-207ENST00000426253 OR2T11Q8NH01 316 aa5.59□□□□□ -1.51
NIF3L1-207ENST00000426253 LILRB4Q8NHJ6 448 aa5.59□□□□□ -1.51
NIF3L1-207ENST00000426253 NEIL3Q8TAT5 605 aa5.59□□□□□ -1.51
NIF3L1-207ENST00000426253 Q8TCH9 128 aa5.59□□□□□ -1.51
NIF3L1-207ENST00000426253 AGR3Q8TD06 166 aa5.59□□□□□ -1.51
NIF3L1-207ENST00000426253 ZBTB9Q96C00 473 aa5.59□□□□□ -1.51
NIF3L1-207ENST00000426253 NTNG2Q96CW9 530 aa5.59□□□□□ -1.51
NIF3L1-207ENST00000426253 ELP4Q96EB1 424 aa5.59□□□□□ -1.51
NIF3L1-207ENST00000426253 ZNF597Q96LX8 424 aa5.59□□□□□ -1.51
NIF3L1-207ENST00000426253 COL21A1Q96P44 957 aa5.59□□□□□ -1.51
NIF3L1-207ENST00000426253 ADOQ96SZ5 270 aa5.59□□□□□ -1.51
NIF3L1-207ENST00000426253 TIMP4Q99727 224 aa5.59□□□□□ -1.51
NIF3L1-207ENST00000426253 GPATCH1Q9BRR8 931 aaKnown RBP5.59□□□□□ -1.51
NIF3L1-207ENST00000426253 TTYH2Q9BSA4 534 aa5.59□□□□□ -1.51
NIF3L1-207ENST00000426253 C19orf24Q9BVV8 132 aa5.59□□□□□ -1.51
NIF3L1-207ENST00000426253 UCK2Q9BZX2 261 aa5.59□□□□□ -1.51
NIF3L1-207ENST00000426253 STMN4Q9H169 189 aaPredicted RBP5.59□□□□□ -1.51
NIF3L1-207ENST00000426253 CENPHQ9H3R5 247 aa5.59□□□□□ -1.51
NIF3L1-207ENST00000426253 ZCCHC4Q9H5U6 513 aa5.59□□□□□ -1.51
NIF3L1-207ENST00000426253 REEP4Q9H6H4 257 aa5.59□□□□□ -1.51
NIF3L1-207ENST00000426253 ZNF703Q9H7S9 590 aaPredicted RBP5.59□□□□□ -1.51
NIF3L1-207ENST00000426253 KLRF1Q9NZS2 232 aa5.59□□□□□ -1.51
NIF3L1-207ENST00000426253 SH3BP4Q9P0V3 963 aa5.59□□□□□ -1.51
NIF3L1-207ENST00000426253 SPRR3Q9UBC9 169 aa5.59□□□□□ -1.51
NIF3L1-207ENST00000426253 ZDHHC2Q9UIJ5 367 aa5.59□□□□□ -1.51
NIF3L1-207ENST00000426253 RAB21Q9UL25 225 aa5.59□□□□□ -1.51
NIF3L1-207ENST00000426253 C19orf53Q9UNZ5 99 aaPredicted RBP5.59□□□□□ -1.51
NIF3L1-207ENST00000426253 RNF6Q9Y252 685 aa5.59□□□□□ -1.51
NIF3L1-207ENST00000426253 TMED5Q9Y3A6 229 aa5.59□□□□□ -1.51
NIF3L1-207ENST00000426253 PCDHGB3Q9Y5G1 929 aa5.59□□□□□ -1.51
NIF3L1-207ENST00000426253 PTGDR2Q9Y5Y4 395 aa5.59□□□□□ -1.51
NIF3L1-207ENST00000426253 AKAP6Q13023 2319 aa5.58□□□□□ -1.52
NIF3L1-207ENST00000426253 LOC102723971A0A1B0GUV8 181 aa5.58□□□□□ -1.52
NIF3L1-207ENST00000426253 KRTAP23-1A1A580 65 aa5.58□□□□□ -1.52
NIF3L1-207ENST00000426253 NKX2-6A6NCS4 301 aa5.58□□□□□ -1.52
NIF3L1-207ENST00000426253 SERINC4A6NH21 518 aa5.58□□□□□ -1.52
NIF3L1-207ENST00000426253 TMEM114B3SHH9 223 aa5.58□□□□□ -1.52
NIF3L1-207ENST00000426253 UPK1AO00322 258 aa5.58□□□□□ -1.52
NIF3L1-207ENST00000426253 PIP5K1BO14986 540 aa5.58□□□□□ -1.52
NIF3L1-207ENST00000426253 LSM1O15116 133 aaKnown RBP5.58□□□□□ -1.52
NIF3L1-207ENST00000426253 TBX19O60806 448 aa5.58□□□□□ -1.52
NIF3L1-207ENST00000426253 COQ9O75208 318 aa5.58□□□□□ -1.52
NIF3L1-207ENST00000426253 SKAP2O75563 359 aaPredicted RBP5.58□□□□□ -1.52
NIF3L1-207ENST00000426253 CTAG2O75638 210 aa5.58□□□□□ -1.52
NIF3L1-207ENST00000426253 PRPS2P11908 318 aa5.58□□□□□ -1.52
NIF3L1-207ENST00000426253 NEFHP12036 1026 aa5.58□□□□□ -1.52
NIF3L1-207ENST00000426253 BCKDHAP12694 445 aa5.58□□□□□ -1.52
NIF3L1-207ENST00000426253 IGFBP2P18065 325 aa5.58□□□□□ -1.52
NIF3L1-207ENST00000426253 PTPN6P29350 595 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms