RNA–Protein interactions for RNA: ENST00000425971.2

HMGB1P32-201, Transcript of high mobility group box 1 pseudogene 32, humanhuman

BASIC

Gene HMGB1P32, Length 565 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P32-201ENST00000425971 WDR41Q9HAD4 459 aa5.15□□□□□ -1.59
HMGB1P32-201ENST00000425971 ROPN1Q9HAT0 212 aaPredicted RBP5.15□□□□□ -1.59
HMGB1P32-201ENST00000425971 TXLNGQ9NUQ3 528 aa5.15□□□□□ -1.59
HMGB1P32-201ENST00000425971 SHANK1Q9Y566 2161 aa5.15□□□□□ -1.59
HMGB1P32-201ENST00000425971 MYOFQ9NZM1 2061 aa5.14□□□□□ -1.59
HMGB1P32-201ENST00000425971 COL27A1Q8IZC6 1860 aaPredicted RBP5.14□□□□□ -1.59
HMGB1P32-201ENST00000425971 NEDD8-MDP1E9PL57 170 aa5.14□□□□□ -1.59
HMGB1P32-201ENST00000425971 K7EQG2 157 aa5.14□□□□□ -1.59
HMGB1P32-201ENST00000425971 SOCS3O14543 225 aa5.14□□□□□ -1.59
HMGB1P32-201ENST00000425971 BUB1O43683 1085 aa5.14□□□□□ -1.59
HMGB1P32-201ENST00000425971 IDH3BO43837 385 aa5.14□□□□□ -1.59
HMGB1P32-201ENST00000425971 APODP05090 189 aa5.14□□□□□ -1.59
HMGB1P32-201ENST00000425971 IL4RP24394 825 aa5.14□□□□□ -1.59
HMGB1P32-201ENST00000425971 HPDP32754 393 aaPredicted RBP5.14□□□□□ -1.59
HMGB1P32-201ENST00000425971 HILS1P60008 231 aa5.14□□□□□ -1.59
HMGB1P32-201ENST00000425971 LAMTOR4Q0VGL1 99 aa5.14□□□□□ -1.59
HMGB1P32-201ENST00000425971 HKDC1Q2TB90 917 aa5.14□□□□□ -1.59
HMGB1P32-201ENST00000425971 ACSF3Q4G176 576 aaPredicted RBP5.14□□□□□ -1.59
HMGB1P32-201ENST00000425971 ZC2HC1BQ5TFG8 222 aa5.14□□□□□ -1.59
HMGB1P32-201ENST00000425971 ZNF613Q6PF04 617 aa5.14□□□□□ -1.59
HMGB1P32-201ENST00000425971 CWC27Q6UX04 472 aaKnown RBP5.14□□□□□ -1.59
HMGB1P32-201ENST00000425971 BHLHA9Q7RTU4 235 aa5.14□□□□□ -1.59
HMGB1P32-201ENST00000425971 LRRTM1Q86UE6 522 aa5.14□□□□□ -1.59
HMGB1P32-201ENST00000425971 PLA2G4DQ86XP0 818 aa5.14□□□□□ -1.59
HMGB1P32-201ENST00000425971 LINC00518Q8N0U6 118 aa5.14□□□□□ -1.59
HMGB1P32-201ENST00000425971 SLC34A3Q8N130 599 aa5.14□□□□□ -1.59
HMGB1P32-201ENST00000425971 BCORP1Q8N888 145 aa5.14□□□□□ -1.59
HMGB1P32-201ENST00000425971 MLKLQ8NB16 471 aa5.14□□□□□ -1.59
HMGB1P32-201ENST00000425971 ICA1LQ8NDH6 482 aa5.14□□□□□ -1.59
HMGB1P32-201ENST00000425971 ZNF397Q8NF99 534 aaPredicted RBP5.14□□□□□ -1.59
HMGB1P32-201ENST00000425971 OR52B4Q8NGK2 314 aa5.14□□□□□ -1.59
HMGB1P32-201ENST00000425971 PCNPQ8WW12 178 aaKnown RBP5.14□□□□□ -1.59
HMGB1P32-201ENST00000425971 NCLNQ969V3 563 aa5.14□□□□□ -1.59
HMGB1P32-201ENST00000425971 NDUFAF3Q9BU61 184 aa5.14□□□□□ -1.59
HMGB1P32-201ENST00000425971 NLNQ9BYT8 704 aa5.14□□□□□ -1.59
HMGB1P32-201ENST00000425971 NACA2Q9H009 215 aa5.14□□□□□ -1.59
HMGB1P32-201ENST00000425971 TM9SF3Q9HD45 589 aa5.14□□□□□ -1.59
HMGB1P32-201ENST00000425971 THYN1Q9P016 225 aa5.14□□□□□ -1.59
HMGB1P32-201ENST00000425971 CUBNO60494 3623 aa5.14□□□□□ -1.59
HMGB1P32-201ENST00000425971 MXRA5Q9NR99 2828 aa5.14□□□□□ -1.59
HMGB1P32-201ENST00000425971 DOCK9Q9BZ29 2069 aa5.13□□□□□ -1.59
HMGB1P32-201ENST00000425971 IGLV3-22A0A075B6J6 115 aa5.13□□□□□ -1.59
HMGB1P32-201ENST00000425971 TRAPPC3O43617 180 aa5.13□□□□□ -1.59
HMGB1P32-201ENST00000425971 HPRP00739 348 aa5.13□□□□□ -1.59
HMGB1P32-201ENST00000425971 IGHG1P01857 330 aa5.13□□□□□ -1.59
HMGB1P32-201ENST00000425971 ADORA3P0DMS8 318 aa5.13□□□□□ -1.59
HMGB1P32-201ENST00000425971 CYP11B1P15538 503 aa5.13□□□□□ -1.59
HMGB1P32-201ENST00000425971 ATF6P18850 670 aa5.13□□□□□ -1.59
HMGB1P32-201ENST00000425971 AXLP30530 894 aa5.13□□□□□ -1.59
HMGB1P32-201ENST00000425971 TRIM23P36406 574 aa5.13□□□□□ -1.59
HMGB1P32-201ENST00000425971 RPL10AP62906 217 aaKnown RBP5.13□□□□□ -1.59
HMGB1P32-201ENST00000425971 FASTKQ14296 549 aaKnown RBP5.13□□□□□ -1.59
HMGB1P32-201ENST00000425971 ZNF146Q15072 292 aa5.13□□□□□ -1.59
HMGB1P32-201ENST00000425971 MS4A18Q3C1V0 323 aa5.13□□□□□ -1.59
HMGB1P32-201ENST00000425971 DPY19L2P2Q6ZN68 376 aa5.13□□□□□ -1.59
HMGB1P32-201ENST00000425971 TIPARPQ7Z3E1 657 aaKnown RBP5.13□□□□□ -1.59
HMGB1P32-201ENST00000425971 LMNTD2Q8IXW0 634 aa5.13□□□□□ -1.59
HMGB1P32-201ENST00000425971 Q8NBF4 154 aa5.13□□□□□ -1.59
HMGB1P32-201ENST00000425971 STKLD1Q8NE28 680 aa5.13□□□□□ -1.59
HMGB1P32-201ENST00000425971 CCDC110Q8TBZ0 833 aa5.13□□□□□ -1.59
HMGB1P32-201ENST00000425971 FBXO25Q8TCJ0 367 aa5.13□□□□□ -1.59
HMGB1P32-201ENST00000425971 CHPT1Q8WUD6 406 aa5.13□□□□□ -1.59
HMGB1P32-201ENST00000425971 DEPPQ9NTK1 212 aa5.13□□□□□ -1.59
HMGB1P32-201ENST00000425971 TUBGCP4Q9UGJ1 667 aa5.13□□□□□ -1.59
HMGB1P32-201ENST00000425971 ZNF490Q9ULM2 529 aaPredicted RBP5.13□□□□□ -1.59
HMGB1P32-201ENST00000425971 ASB3Q9Y575 518 aa5.13□□□□□ -1.59
HMGB1P32-201ENST00000425971 TGP01266 2768 aa5.13□□□□□ -1.59
HMGB1P32-201ENST00000425971 TRIP11Q15643 1979 aa5.13□□□□□ -1.59
HMGB1P32-201ENST00000425971 CROCCQ5TZA2 2017 aa5.13□□□□□ -1.59
HMGB1P32-201ENST00000425971 ANK2Q01484 3957 aa5.12□□□□□ -1.59
HMGB1P32-201ENST00000425971 PKDREJQ9NTG1 2253 aa5.12□□□□□ -1.59
HMGB1P32-201ENST00000425971 IGLON5A6NGN9 336 aa5.12□□□□□ -1.59
HMGB1P32-201ENST00000425971 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.12□□□□□ -1.59
HMGB1P32-201ENST00000425971 CHMP2AO43633 222 aa5.12□□□□□ -1.59
HMGB1P32-201ENST00000425971 SMPD2O60906 423 aa5.12□□□□□ -1.59
HMGB1P32-201ENST00000425971 STK17BO94768 372 aa5.12□□□□□ -1.59
HMGB1P32-201ENST00000425971 TNFSF15O95150 251 aa5.12□□□□□ -1.59
HMGB1P32-201ENST00000425971 SLC1A6P48664 564 aa5.12□□□□□ -1.59
HMGB1P32-201ENST00000425971 NAAAQ02083 359 aa5.12□□□□□ -1.59
HMGB1P32-201ENST00000425971 SCGB2A2Q13296 93 aa5.12□□□□□ -1.59
HMGB1P32-201ENST00000425971 ZKSCAN8Q15776 578 aaPredicted RBP5.12□□□□□ -1.59
HMGB1P32-201ENST00000425971 ISXQ2M1V0 245 aa5.12□□□□□ -1.59
HMGB1P32-201ENST00000425971 WDR25Q64LD2 544 aaPredicted RBP5.12□□□□□ -1.59
HMGB1P32-201ENST00000425971 CENPPQ6IPU0 288 aa5.12□□□□□ -1.59
HMGB1P32-201ENST00000425971 Q6ZTC4 211 aa5.12□□□□□ -1.59
HMGB1P32-201ENST00000425971 NIPA1Q7RTP0 329 aa5.12□□□□□ -1.59
HMGB1P32-201ENST00000425971 NUFIP2Q7Z417 695 aaKnown RBP5.12□□□□□ -1.59
HMGB1P32-201ENST00000425971 FAM131BQ86XD5 332 aa5.12□□□□□ -1.59
HMGB1P32-201ENST00000425971 ZNRF1Q8ND25 227 aa5.12□□□□□ -1.59
HMGB1P32-201ENST00000425971 FCGR1BQ92637 280 aa5.12□□□□□ -1.59
HMGB1P32-201ENST00000425971 CYP2S1Q96SQ9 504 aa5.12□□□□□ -1.59
HMGB1P32-201ENST00000425971 WRAP53Q9BUR4 548 aaKnown RBP5.12□□□□□ -1.59
HMGB1P32-201ENST00000425971 MCRIP2Q9BUT9 160 aaKnown RBP5.12□□□□□ -1.59
HMGB1P32-201ENST00000425971 RNF41Q9H4P4 317 aaPredicted RBP5.12□□□□□ -1.59
HMGB1P32-201ENST00000425971 DCTPP1Q9H773 170 aa5.12□□□□□ -1.59
HMGB1P32-201ENST00000425971 ACTR8Q9H981 624 aa5.12□□□□□ -1.59
HMGB1P32-201ENST00000425971 Q9HAA7 133 aa5.12□□□□□ -1.59
HMGB1P32-201ENST00000425971 BCAP29Q9UHQ4 241 aa5.12□□□□□ -1.59
HMGB1P32-201ENST00000425971 U3KQV3 271 aa5.12□□□□□ -1.59
HMGB1P32-201ENST00000425971 NBEAL2Q6ZNJ1 2754 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms